TCONS_00014969-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014969-protein
Unique NameTCONS_00014969-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length508

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014969-protein ID=TCONS_00014969-protein|Name=TCONS_00014969-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
MVRSIDLMMGYFAILLLIFSIGPPTVKGNAEEFIIFAKANETRFLDLDPV
TNPQPPYAPIDSEPFIVGVAFDYEDDVIFTSDLRLSEIVRMHPNGSNKEV
IANGSRSDGLAWDWVNERLYWTEYVTDTIRRYSPNNQSGEILVDQGLEKP
LAIVLNPCNEYAMYWTDWGASPSIKKASMDGENVTVIISTDITYPNGLAI
DIDEGRLYWADSSYDRIESSDLEGRDRLVILSSIPHVFGLTLFKDDLYWT
DWTERWVALANKNGQDPQVVLVDNLDQNPMAIKVFAKRNGTCWSQWSVWS
DCDRPCGVGFHKRSRMCYNTASDTECIGNDVELLKCNEHLCPDICNATQK
ACSCSNVPVIYDMTKLQTNDTFYGINETAVNNSLATIAKWNAQEITLLCK
EARCRESDLEATINELQVEEDTVQTSLNTVMDSQILIRKMIDCHANVWSR
KGKLFDHYEQLCQRKVIIQQVLSDLKIKKIILENEKKRCADRSWLRTVLE
ETWHRTIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008368XLOC_008368Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014969TCONS_00014969Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR000033LDLR_classB_rpt
IPR0110426-blade_b-propeller_TolB-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 399..419
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 33..284
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 293..342
e-value: 8.0E-11
score: 52.0
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 294..341
e-value: 5.9E-10
score: 39.1
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 291..342
score: 11.49
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 291..341
IPR000033LDLR class B repeatSMARTSM00135LY_2coord: 185..227
e-value: 2.7E-14
score: 63.5
coord: 140..184
e-value: 1.1E-5
score: 34.9
coord: 99..139
e-value: 7.2E-4
score: 28.9
coord: 228..267
e-value: 2.0
score: 15.9
IPR000033LDLR class B repeatPFAMPF00058Ldl_recept_bcoord: 205..232
e-value: 1.9E-4
score: 21.7
coord: 163..202
e-value: 2.5E-9
score: 37.4
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 205..246
score: 12.152
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 117..159
score: 11.247
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 161..204
score: 14.867
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 76..116
score: 5.051
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 247..288
score: 8.114
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 25..356
e-value: 8.5E-44
score: 149.5

Blast
BLAST of TCONS_00014969-protein vs. Swiss-Prot (Human)
Match: LRP4 (Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens GN=LRP4 PE=1 SV=4)

HSP 1 Score: 173.326 bits (438), Expect = 4.029e-46
Identity = 100/263 (38.02%), Postives = 155/263 (58.94%), Query Frame = 0
Query:   31 EEFIIFAKANETRFLDLDP--VTNPQPPYAPIDSEPFIVGVAFDYEDDVIFTSDLRLSEIVRMHPNGSNKEVIANGSRSD--GLAWDWVNERLYWTEYVTDTIRRYSPNNQSGEILVDQGLEKPLAIVLNPCNEYAMYWTDWGASPSIKKASMDGENVTVIISTDITYPNGLAIDIDEGRLYWADSSYDRIESSDLEGRDRLVILSS-IPHVFGLTLFKDDLYWTDWTERWVALANKNGQDPQVVLVDNLDQNPMAIKVFAKR 288
            ++F++FA+  + R +  D   +++   P A + S    V + +D  DD ++ +D+    I R   +G+ +EV+ + S     GLA DWV  +LYWT+  TD I   + +     +L+ + L++P  IV+ P   Y MYWTDWGASP I++A MD     VIIS+++T+PNGLAID    RLYWAD+    IE + L+G  R V++ S +PH FGLTL+ + +YWTDW  + +  A++     +  L +NL +N M I VF +R
Sbjct:  741 DKFLLFARRMDIRRISFDTEDLSDDVIPLADVRS---AVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGY-MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENL-ENLMDIHVFHRR 998          

HSP 2 Score: 161.77 bits (408), Expect = 2.972e-42
Identity = 103/321 (32.09%), Postives = 168/321 (52.34%), Query Frame = 0
Query:   19 FSIGPPT---VKGNA-------EEFIIFAKANETRFLDLDPVTNPQPPYAPIDSEPFIVGVAFDYEDDVIFTSDLRLSEIVRMHPNGSNKE-VIANGSRS-DGLAWDWVNERLYWTEYVTDTIRRYSPNNQSGEILVDQGLEKPLAIVLNPCNEYAMYWTDWGASPSIKKASMDGENVTVIISTDITYPNGLAIDIDEGRLYWADSSYDRIESSDLEGRDRLVILSSIPHVFGLTLFKDDLYWTDWTERWVALANK-NGQDPQVVLVDNLDQNPMAIKVFAKRNGTCWSQWSVWSDCDRPCGVGFHKRSRMCYNTASDTEC 326
            FS   PT   +KG+        E +++F+     R + LD  ++    + P+     ++ + +D  D  ++ +D+ L  I R   NGSN E VI  G ++ DGLA DWV   LYWT+   +TI     +    ++L++  L++P AI + P   Y ++WTDWG    I++A++DG    V+I+TD+ +PNGL +D D  R+YW D+  DRIES+DL G+ R V++S + H F LT     +YWTDW  + +   +K +G++ + VL +      + +    ++ GT              CGV     + +C+  ASD  C
Sbjct: 1331 FSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLD-TSDHTDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGY-LFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTGT------------NACGVNNGGCTHLCFARASDFVC 1637          

HSP 3 Score: 161.384 bits (407), Expect = 4.002e-42
Identity = 88/222 (39.64%), Postives = 134/222 (60.36%), Query Frame = 0
Query:   67 VGVAFDYEDDVIFTSDLRLSEIVRMHPNGSN-KEVIANGSRS-DGLAWDWVNERLYWTEYVTDTIRRYSPNNQSGEILVDQGLEKPLAIVLNPCNEYAMYWTDWGASPSIKKASMDGENVTVIISTDITYPNGLAIDIDEGRLYWADSSYDRIESSDLEGRDRLVILS-SIPHVFGLTLFKDDLYWTDWTERWVALANKNGQDPQVVLVDNLDQNPMAIKVF 285
            + + F +  +++F SD+ L  I+R + NGSN +EV++ G  S  GLA DWV+++LYWT+  T  I   + +    ++L+ Q LEKP AI L+P  E  +YWTDWG +P I+ +SMDG    +I  T + +PNGL ID    R+YW D+ +  IE ++L+G  R  ++S  +PH F +T+F+D LYWTDW  + +  ANK     Q ++ + L   PM I   
Sbjct:  471 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHP-MEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKL-HFPMDIHTL 690          

HSP 4 Score: 146.747 bits (369), Expect = 2.490e-37
Identity = 92/287 (32.06%), Postives = 148/287 (51.57%), Query Frame = 0
Query:   25 TVKGNAEEFIIFAKANETRFLDLDPVTNPQPPY-----APID-SEPFIVGVAFDYEDDVIFTSDLRLSEIVRMHPNGSNKE-VIANG-SRSDGLAWDWVNERLYWTEYVTDTIRRYSPNNQSGEILVDQGLEKPLAIVLNPCNEYA-MYWTDWGASPSIKKASMDGENVTVIISTDITYPNGLAIDIDEGRLYWADSSYDRIESSDLEGRDRLVILSSIPHVFGLTLFKDDLYWTDWTERWVALANKNGQDPQVVLVDNLD----------QNPMAIKVFAKRNGTC 292
            T       F+IFA+  + R + LD       PY      PI+ +    + +  D ++  ++ SD  L  I R + +GS  E +I  G   +DGLA D +  ++YWT+  T+ I   + +    ++LV Q L+ P AIVL   +E   MYWTDWG +  ++++ MDG +  V+I+ ++ +PNGL +D    +L WAD+  +RIE++DL G +R  ++S + H +GLTL    +YWTDW  R +  A+K      +++  NL             P+       RNG C
Sbjct: 1042 TCSPGMNSFLIFARRIDIRMVSLDI------PYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLY--HEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNLPGLMDMQAVDRAQPLGFNKCGSRNGGC 1320          
The following BLAST results are available for this feature:
BLAST of TCONS_00014969-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRP44.029e-4638.02Low-density lipoprotein receptor-related protein 4... [more]
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