TCONS_00014483-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014483-protein
Unique NameTCONS_00014483-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length258

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014483-protein ID=TCONS_00014483-protein|Name=TCONS_00014483-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MKTMLKLMDKESDEYNCLYNALRKVEEVADYINEMQRISETYTPLFQNLC
KQYPEVEKSEMDVDNLLHYGRVHWANADYPNRRNSGHSSTFSSMNNNKTE
AENLTVFIFKKAIILISHHIKAHKKLNQSQNMKSDIKFHYFVPISHLILR
DHAWSENDSDQVWEIVDATNECEDEQTVFVFVNRTGEEKKVFVNAIKEAK
KISKFSNSIPVLGKGTLRSSFDGRRSNGGKEGLAKPTIKKKPSFGKRDTE
KKHGIFGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008101XLOC_008101Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014483TCONS_00014483Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH_dom-like
IPR000219DH-domain
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035023 regulation of Rho protein signal transduction
molecular_function GO:0005089 Rho guanyl-nucleotide exchange factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.900.10coord: 1..50
e-value: 9.3E-5
score: 21.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..258
IPR011993PH domain-likeGENE3D2.30.29.30coord: 51..201
e-value: 2.1E-19
score: 69.5
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 45..198
IPR000219Dbl homology (DH) domainSUPERFAMILY48065DBL homology domain (DH-domain)coord: 2..44

Blast
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BLAST of TCONS_00014483-protein vs. Swiss-Prot (Human)
Match: TIAM2 (T-lymphoma invasion and metastasis-inducing protein 2 OS=Homo sapiens GN=TIAM2 PE=2 SV=4)

HSP 1 Score: 92.0485 bits (227), Expect = 4.879e-21
Identity = 68/209 (32.54%), Postives = 111/209 (53.11%), Query Frame = 0 
Query:    1 MKTMLKLMDKESDEYNCLYNALRKVEEVADYINEMQRISETYTPLFQNLCKQYPEVEK--SEMDVDNLLHYGRVHWANADYPNRRNSGHSSTFSSMNNNKTEAENLTVFIFKKAIILI-SHHIKAHKKL---NQSQNMKSDI---KFHYFVPISHLILR--DHAWSENDSDQVWEIVDATNECEDE-QTVFVFVNRTGEEKKVFVNAIK 197
            +K ++ L D+ES+E+  L  AL+ +E+VA +INEMQ+I E Y  +F  L  +    EK  +E+ +  LL +  V W N              F S+   + + E LTVF+FK+A+IL+   + K  KKL   ++  +  +D+   KF + +PIS L +R  + A +EN+S  +WE++   +E E   +T+F       E K   V  I+
Sbjct: 1259 LKELVSLTDQESEEHYHLTEALKAMEKVASHINEMQKIYEDYGTVFDQLVAEQSGTEKEVTELSMGELLMHSTVSWLNP-------------FLSLGKARKDLE-LTVFVFKRAVILVYKENCKLKKKLPSNSRPAHNSTDLDPFKFRWLIPISALQVRLGNPAGTENNS--IWELIHTKSEIEGRPETIFQLCCSDSESKTNIVKVIR 1451
The following BLAST results are available for this feature:
BLAST of TCONS_00014483-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TIAM24.879e-2132.54T-lymphoma invasion and metastasis-inducing protei... [more]
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