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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014483 ID=TCONS_00014483|Name=TCONS_00014483|organism=Clytia hemisphaerica|type=transcript|length=1566bp ATCAACTGAGAATATGAATGTAATATTCTTTAGATTCGAACGATGCTTTG AGGGCATTTTTGATAGCAAGAAATCCTAAACAACAACATACAGGAACAGT GGAATCCTACTTGATCACCCCAATTCAGCGTATTCTGCGTTACCCACTGC TGATGAAGACCATGCTGAAACTCATGGACAAAGAGAGTGATGAATACAAC TGTCTTTACAACGCCTTACGTAAGGTGGAGGAGGTGGCTGACTACATCAA CGAAATGCAACGTATCAGTGAAACATACACTCCTCtctttcaaaatcttt gcaaaCAATATCCAGAAGTCGAAAAGTCTGAAATGGACGTGGACAACCTG TTACATTACGGACGTGTACACTGGGCCAATGCGGACTACCCGAACCGACG GAATTCCGGTCATTCTTCGACCTTCTCATCCATGAACAACAACAAGACAG AGGCTGAAAATCTCACCGTTTTTAtatTCAAGAAAGCAATCATCCTCATT TCACACCACATCAAAGCTCATAAAAAgCTCAACCAATCACAAAACATGAA GAGCGATATCAAATTTCATTATTTCGTTCCTATTTCACATTTGATATTGC GCGACCATGCCTGGTCTGAGAATGATTCGGACCAAGTTTGGGAGATTGTT GATGCAACCAATGAATGTGAAGATGAACAAACCGTCTTTGTGTTTGTTAA CAGAACTGGTGAAGAAAAGAAGGTCTTTGTCAACGCCATCAAGGAAGCCA AGAAAATCAGCAAATTTTCCAATTCCATTCCTGTACTTGGGAAAGGTACC CTGAGATCTTCATTTGACGGGCGGCGCTCGAATGGCGGGAAAGAAGGGCT CGCCAAACcaacaataaaaaagaaaccGAGTTTCGGTAAAAGAGACACTG AAAAGAAGCATGGCATTTTTGGAAAGTAAAGTTGGGGTtcattttgtatg atttttgttTGCAGAATTCTTGANTGGAAAGTAAAGTTATGGTtcatttt gtatgatttttgttTGCAGAATTCTTGAATAAATTGTGAAATTTCATAGT TTTCATGattatgcaccattgcaatgtcctcgcggacagctgattggttg caagtgacgcaaagtcaatcaattcgTCACATGCACCCAATCAGCTGTCG GGTTCATGATGTAATATCAGAtcacattgcaatggtgcatatcatgaata ttttccAGTAGCCCACAAGGATTTATCGCGCCTTCagaaaatttcttgaa aaattctGCATTTTTGCAGAACTTTGGACTCTTTGGTATTGCCACAAAGG AGGGATATCTTAGACTTTTATGTCAAACTaatttattttggttttaattt ttttatcacgTTTTGTAATAATAGAGACGATTATAcacatatatattttt tctNCTAATTTTTTATCACGTTTTGTAATAATAGAGACGATTATACACAT ATatatttttgctaattttttgtatttatggTGAATAAATGAAACAACAA GTAAATCATGAACTCGCTAGAACGCCCTGGTCTATCAAAACGAAAACCAT TTGATTTGTTTATAAA Run BLAST on NCBI protein sequence of TCONS_00014483-protein >TCONS_00014483-protein ID=TCONS_00014483-protein|Name=TCONS_00014483-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MKTMLKLMDKESDEYNCLYNALRKVEEVADYINEMQRISETYTPLFQNLC KQYPEVEKSEMDVDNLLHYGRVHWANADYPNRRNSGHSSTFSSMNNNKTE AENLTVFIFKKAIILISHHIKAHKKLNQSQNMKSDIKFHYFVPISHLILR DHAWSENDSDQVWEIVDATNECEDEQTVFVFVNRTGEEKKVFVNAIKEAK KISKFSNSIPVLGKGTLRSSFDGRRSNGGKEGLAKPTIKKKPSFGKRDTE KKHGIFGK Run BLAST on NCBI transcript from alignment at sc0000188:130198..133082+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014483 ID=TCONS_00014483|Name=TCONS_00014483|organism=Clytia hemisphaerica|type=transcript|length=2885bp|location=Sequence derived from alignment at sc0000188:130198..133082+ (Clytia hemisphaerica) ATCAACTGAGAATATGAATGTAATATTCTTTAGATTCGAACGATGCTTTG
AGGGCATTTTTGATAGCAAGAAATCCTAAACAACAACATACAGGAACAGT
GGAATCCTACTTGATCACCCCAATTCAGGTAAACTCTCATTCTTCGCCAA
AGAAAGCCACGTCATACACTGTTTCACCTATAAGTTAAAAAACTTCGATA
GGAGAATTTAGTCCTCTAAGATGCTTTGCACACCTAGCAAACGTTATTAA
TCTTGCGTAACTTAGTTCTACCGTAGCGCTTTGTTAACACCCGATACTGA
CGTTTGATCAGTCTCGCTGTAAAAAGAGGCTAACCTCTCATTCTACATCC
CCGAACGTTCTTCGACTTTCTTCTTCATCCACAGGTTTTGATAGTCTCAC
TTTCTTTCTAGCGTATTCTGCGTTACCCACTGCTGATGAAGACCATGCTG
AAACTCATGGACAAAGAGAGTGATGAATACAACTGTCTTTACAACGCCTT
ACGTAAGGTGGAGGAGGTGGCTGACTACATCAACGAAATGCAACGTATCA
GTGAAACATACACTCCTCtctttcaaaatctttgcaaaCAATATCCAGAA
GTCGAAGTAAGATCATCTTGTTAATCAACTCGCTTTTCAACCACGCGGTT
AAGACAGACAAGTCATAAATTTTCCCCATCTATATGTTGTGTGTTCGCTC
ATTTTAAAGGATTCTTTAACACTCCCTCCTGATAAGCACAATTTTGATCA
TCTGAGGAGAATGCTGCTTTTGAAAGATCAGATTTTTTCCCTGAATAAAT
TAATTATATgagttttttatgaatttttctgTAGAAGTCTGAAATGGACG
TGGACAACCTGTTACATTACGGACGTGTACACTGGGCCAATGCGGACTAC
CCGAACCGACGGAATTCCGGTCATTCTTCGACCTTCTCATCCATGAACAA
CAACAAGACAGAGGCTGAAAATCTCACCGTTTTTAGTAAGACTTACTTTT
TCTTACTTTCTCTTCTTTTAAGGAGACGTTGACCTGAATTTTAAGAGTGC
ATGTATAAAGGAGTATGAAAAGAATTCAAGCCCTAAAGATTCTTGTCATA
TTCCATTAAAACATGACATATTGCATATGATCACGCCCAACCAAATTTAC
AGCGGCCATAGATTGACTtgtaaacttttcaaatttatttttagtatTCA
AGAAAGCAATCATCCTCATTTCACACCACATCAAAGCTCATAAAAAggta
atgatttttttcagaaatacaGTGCTGTCAAGGCTCAAAGGGGCATGCAT
GCTTACTTGACAAATATGTTATACCACGAttgttttccctttttcagCTC
AACCAATCACAAAACATGAAGAGCGATATCAAATTTCATTATTTCGTTCC
TATTTCACATTTGATATTGCGCGACCATGCCTGGTCTGAGAATGGTATGT
TTACCTCCAATTTGTATTTTAATTACTCTACACCGCACAATACCTCTAAT
AATTAGCTTTTGAATAGGACCAGTAATAGCCTTGCCCATACCATAATTTA
GTTTGAATTGTTCGAGTTGTGTATACACACGACGGTTGACTCAAGAAAAC
CATTGATGTTCTATTGTAAACAAGTccaattaaaaatttcaatgTTAAAT
CAGATTAAGCAAACAACCAAGGCTTTTGTTATAGTTGCGAGTTTTTGAGC
TGAAAGTAAAAATACGTGTTTCTTCGATTTATCTTTCAGATTCGGACCAA
GTTTGGGAGATTGTTGATGCAACCAATGAATGTGAAGATGAACAAACCGT
CTTTGTGTTTGTTAACAGGTATGATGACAAGTGAAATCTTTCTTCTGTTT
GTCTTAAAGCGAATCTCGGTGGTAGTCTTGTGGCATATAAACTAATATTT
CGTCTAGCCTAATTCGATAGtgttatttgtattttttgataaatgctGGA
ATACATTTTAAGTTTGGAATCTCTTCAAGCGATACAGTATAAAACACCTA
ACTTGTTTGTGCTTACTTTTAGAACTGGTGAAGAAAAGAAGGTCTTTGTC
AACGCCATCAAGGAAGCCAAGAAAATCAGCAAATTTTCCAATTCCATTCC
TGTACTTGGGAAAGGTACCCTGAGATCTTCATTTGACGGGCGGCGCTCGA
ATGGCGGGAAAGAAGGGCTCGCCAAACcaacaataaaaaagaaaccGAGT
TTCGGTAAAAGAGACACTGAAAAGAAGCATGGCATTTTTGGAAAGTAAAG
TTGGGGTtcattttgtatgatttttgttTGCAGAATTCTTGANTGGAAAG
TAAAGTTATGGTtcattttgtatgatttttgttTGCAGAATTCTTGAATA
AATTGTGAAATTTCATAGTTTTCATGattatgcaccattgcaatgtcctc
gcggacagctgattggttgcaagtgacgcaaagtcaatcaattcgTCACA
TGCACCCAATCAGCTGTCGGGTTCATGATGTAATATCAGAtcacattgca
atggtgcatatcatgaatattttccAGTAGCCCACAAGGATTTATCGCGC
CTTCagaaaatttcttgaaaaattctGCATTTTTGCAGAACTTTGGACTC
TTTGGTATTGCCACAAAGGAGGGATATCTTAGACTTTTATGTCAAACTaa
tttattttggttttaatttttttatcacgTTTTGTAATAATAGAGACGAT
TATAcacatatatattttttctNCTAATTTTTTATCACGTTTTGTAATAA
TAGAGACGATTATACACATATatatttttgctaattttttgtatttatgg
TGAATAAATGAAACAACAAGTAAATCATGAACTCGCTAGAACGCCCTGGT
CTATCAAAACGAAAACCATTTGATTTGTTTATAAA Coding sequence (CDS) from alignment at sc0000188:130198..133082+ >TCONS_00014483 ID=TCONS_00014483|Name=TCONS_00014483|organism=Clytia hemisphaerica|type=CDS|length=4662bp|location=Sequence derived from alignment at sc0000188:130198..133082+ (Clytia hemisphaerica) ATGAAGACCATGCTGAAACTCATGGACAAAGAGAGTGATGAATACAACTG TCTTTACAACGCCTTACGTAAGGTGGAGGAGGTGGCTGACTACATCAACG AAATGCAACGTATCAGTGAAACATACACTCCTCtctttcaaaatctttgc aaaCAATATCCAGAAGTCGAAAAGTCTGAAATGGACGTGGACAACCTGTT ACATTACGGACGTGTACACTGGGCCAATGCGGACTACCCGAACCGACGGA ATTCCGGTCATTCTTCGACCTTCTCATCCATGAACAACAACAAGACAGAG GCTGAAAATCTCACCGTTTTTAtatTCAAGAAAGCAATCATCCTCATTTC ACACCACATCAAAGCTCATAAAAAgCTCAACCAATCACAAAACATGAAGA GCGATATCAAATTTCATTATTTCGTTCCTATTTCACATTTGATATTGCGC GACCATGCCTGGTCTGAGAATGATTCGGACCAAGTTTGGGAGATTGTTGA TGCAACCAATGAATGTGAAGATGAACAAACCGTCTTTGTGTTTGTTAACA GAACTGGTGAAGAAAAGAAGGTCTTTGTCAACGCCATCAAGGAAGCCAAG AAAATCAGCAAATTTTCCAATTCCATTCCTGTACTTGGGAAAGGTACCCT GAGATCTTCATTTGACGGGCGGCGCTCGAATGGCGGGAAAGAAGGGCTCG CCAAACcaacaataaaaaagaaaccGAGTTTCGGTAAAAGAGACACTGAA AAGAAGCATGGCATTTTTGGAAAGTAAATGAAGACCATGCTGAAACTCAT GGACAAAGAGAGTGATGAATACAACTGTCTTTACAACGCCTTACGTAAGG TGGAGGAGGTGGCTGACTACATCAACGAAATGCAACGTATCAGTGAAACA TACACTCCTCtctttcaaaatctttgcaaaCAATATCCAGAAGTCGAAAA GTCTGAAATGGACGTGGACAACCTGTTACATTACGGACGTGTACACTGGG CCAATGCGGACTACCCGAACCGACGGAATTCCGGTCATTCTTCGACCTTC TCATCCATGAACAACAACAAGACAGAGGCTGAAAATCTCACCGTTTTTAt atTCAAGAAAGCAATCATCCTCATTTCACACCACATCAAAGCTCATAAAA AgCTCAACCAATCACAAAACATGAAGAGCGATATCAAATTTCATTATTTC GTTCCTATTTCACATTTGATATTGCGCGACCATGCCTGGTCTGAGAATGA TTCGGACCAAGTTTGGGAGATTGTTGATGCAACCAATGAATGTGAAGATG AACAAACCGTCTTTGTGTTTGTTAACAGAACTGGTGAAGAAAAGAAGGTC TTTGTCAACGCCATCAAGGAAGCCAAGAAAATCAGCAAATTTTCCAATTC CATTCCTGTACTTGGGAAAGGTACCCTGAGATCTTCATTTGACGGGCGGC GCTCGAATGGCGGGAAAGAAGGGCTCGCCAAACcaacaataaaaaagaaa ccGAGTTTCGGTAAAAGAGACACTGAAAAGAAGCATGGCATTTTTGGAAA GTAAATGAAGACCATGCTGAAACTCATGGACAAAGAGAGTGATGAATACA ACTGTCTTTACAACGCCTTACGTAAGGTGGAGGAGGTGGCTGACTACATC AACGAAATGCAACGTATCAGTGAAACATACACTCCTCtctttcaaaatct ttgcaaaCAATATCCAGAAGTCGAAAAGTCTGAAATGGACGTGGACAACC TGTTACATTACGGACGTGTACACTGGGCCAATGCGGACTACCCGAACCGA CGGAATTCCGGTCATTCTTCGACCTTCTCATCCATGAACAACAACAAGAC AGAGGCTGAAAATCTCACCGTTTTTAtatTCAAGAAAGCAATCATCCTCA TTTCACACCACATCAAAGCTCATAAAAAgCTCAACCAATCACAAAACATG AAGAGCGATATCAAATTTCATTATTTCGTTCCTATTTCACATTTGATATT GCGCGACCATGCCTGGTCTGAGAATGATTCGGACCAAGTTTGGGAGATTG TTGATGCAACCAATGAATGTGAAGATGAACAAACCGTCTTTGTGTTTGTT AACAGAACTGGTGAAGAAAAGAAGGTCTTTGTCAACGCCATCAAGGAAGC CAAGAAAATCAGCAAATTTTCCAATTCCATTCCTGTACTTGGGAAAGGTA CCCTGAGATCTTCATTTGACGGGCGGCGCTCGAATGGCGGGAAAGAAGGG CTCGCCAAACcaacaataaaaaagaaaccGAGTTTCGGTAAAAGAGACAC TGAAAAGAAGCATGGCATTTTTGGAAAGTAAATGAAGACCATGCTGAAAC TCATGGACAAAGAGAGTGATGAATACAACTGTCTTTACAACGCCTTACGT AAGGTGGAGGAGGTGGCTGACTACATCAACGAAATGCAACGTATCAGTGA AACATACACTCCTCtctttcaaaatctttgcaaaCAATATCCAGAAGTCG AAAAGTCTGAAATGGACGTGGACAACCTGTTACATTACGGACGTGTACAC TGGGCCAATGCGGACTACCCGAACCGACGGAATTCCGGTCATTCTTCGAC CTTCTCATCCATGAACAACAACAAGACAGAGGCTGAAAATCTCACCGTTT TTAtatTCAAGAAAGCAATCATCCTCATTTCACACCACATCAAAGCTCAT AAAAAgCTCAACCAATCACAAAACATGAAGAGCGATATCAAATTTCATTA TTTCGTTCCTATTTCACATTTGATATTGCGCGACCATGCCTGGTCTGAGA ATGATTCGGACCAAGTTTGGGAGATTGTTGATGCAACCAATGAATGTGAA GATGAACAAACCGTCTTTGTGTTTGTTAACAGAACTGGTGAAGAAAAGAA GGTCTTTGTCAACGCCATCAAGGAAGCCAAGAAAATCAGCAAATTTTCCA ATTCCATTCCTGTACTTGGGAAAGGTACCCTGAGATCTTCATTTGACGGG CGGCGCTCGAATGGCGGGAAAGAAGGGCTCGCCAAACcaacaataaaaaa gaaaccGAGTTTCGGTAAAAGAGACACTGAAAAGAAGCATGGCATTTTTG GAAAGTAAATGAAGACCATGCTGAAACTCATGGACAAAGAGAGTGATGAA TACAACTGTCTTTACAACGCCTTACGTAAGGTGGAGGAGGTGGCTGACTA CATCAACGAAATGCAACGTATCAGTGAAACATACACTCCTCtctttcaaa atctttgcaaaCAATATCCAGAAGTCGAAAAGTCTGAAATGGACGTGGAC AACCTGTTACATTACGGACGTGTACACTGGGCCAATGCGGACTACCCGAA CCGACGGAATTCCGGTCATTCTTCGACCTTCTCATCCATGAACAACAACA AGACAGAGGCTGAAAATCTCACCGTTTTTAtatTCAAGAAAGCAATCATC CTCATTTCACACCACATCAAAGCTCATAAAAAgCTCAACCAATCACAAAA CATGAAGAGCGATATCAAATTTCATTATTTCGTTCCTATTTCACATTTGA TATTGCGCGACCATGCCTGGTCTGAGAATGATTCGGACCAAGTTTGGGAG ATTGTTGATGCAACCAATGAATGTGAAGATGAACAAACCGTCTTTGTGTT TGTTAACAGAACTGGTGAAGAAAAGAAGGTCTTTGTCAACGCCATCAAGG AAGCCAAGAAAATCAGCAAATTTTCCAATTCCATTCCTGTACTTGGGAAA GGTACCCTGAGATCTTCATTTGACGGGCGGCGCTCGAATGGCGGGAAAGA AGGGCTCGCCAAACcaacaataaaaaagaaaccGAGTTTCGGTAAAAGAG ACACTGAAAAGAAGCATGGCATTTTTGGAAAGTAAATGAAGACCATGCTG AAACTCATGGACAAAGAGAGTGATGAATACAACTGTCTTTACAACGCCTT ACGTAAGGTGGAGGAGGTGGCTGACTACATCAACGAAATGCAACGTATCA GTGAAACATACACTCCTCtctttcaaaatctttgcaaaCAATATCCAGAA GTCGAAAAGTCTGAAATGGACGTGGACAACCTGTTACATTACGGACGTGT ACACTGGGCCAATGCGGACTACCCGAACCGACGGAATTCCGGTCATTCTT CGACCTTCTCATCCATGAACAACAACAAGACAGAGGCTGAAAATCTCACC GTTTTTAtatTCAAGAAAGCAATCATCCTCATTTCACACCACATCAAAGC TCATAAAAAgCTCAACCAATCACAAAACATGAAGAGCGATATCAAATTTC ATTATTTCGTTCCTATTTCACATTTGATATTGCGCGACCATGCCTGGTCT GAGAATGATTCGGACCAAGTTTGGGAGATTGTTGATGCAACCAATGAATG TGAAGATGAACAAACCGTCTTTGTGTTTGTTAACAGAACTGGTGAAGAAA AGAAGGTCTTTGTCAACGCCATCAAGGAAGCCAAGAAAATCAGCAAATTT TCCAATTCCATTCCTGTACTTGGGAAAGGTACCCTGAGATCTTCATTTGA CGGGCGGCGCTCGAATGGCGGGAAAGAAGGGCTCGCCAAACcaacaataa aaaagaaaccGAGTTTCGGTAAAAGAGACACTGAAAAGAAGCATGGCATT TTTGGAAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00014483-exon-sc0000188-1491911889:130198..130325 | TCONS_00014483-exon-sc0000188-1491911889:130198..130325 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:130198..130325 | TCONS_00014483-exon-sc0000188-1510915933:130198..130325 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:130198..130325 | TCONS_00014483-exon-sc0000188-1575043694:130198..130325 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1491911889:130609..130803 | TCONS_00014483-exon-sc0000188-1491911889:130609..130803 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:130609..130803 | TCONS_00014483-exon-sc0000188-1510915933:130609..130803 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:130609..130803 | TCONS_00014483-exon-sc0000188-1575043694:130609..130803 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1491911889:131032..131182 | TCONS_00014483-exon-sc0000188-1491911889:131032..131182 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:131032..131182 | TCONS_00014483-exon-sc0000188-1510915933:131032..131182 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:131032..131182 | TCONS_00014483-exon-sc0000188-1575043694:131032..131182 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1491911889:131392..131444 | TCONS_00014483-exon-sc0000188-1491911889:131392..131444 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:131392..131444 | TCONS_00014483-exon-sc0000188-1510915933:131392..131444 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:131392..131444 | TCONS_00014483-exon-sc0000188-1575043694:131392..131444 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1491911889:131545..131641 | TCONS_00014483-exon-sc0000188-1491911889:131545..131641 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:131545..131641 | TCONS_00014483-exon-sc0000188-1510915933:131545..131641 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:131545..131641 | TCONS_00014483-exon-sc0000188-1575043694:131545..131641 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1491911889:131937..132015 | TCONS_00014483-exon-sc0000188-1491911889:131937..132015 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:131937..132015 | TCONS_00014483-exon-sc0000188-1510915933:131937..132015 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:131937..132015 | TCONS_00014483-exon-sc0000188-1575043694:131937..132015 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1491911889:132220..133082 | TCONS_00014483-exon-sc0000188-1491911889:132220..133082 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1510915933:132220..133082 | TCONS_00014483-exon-sc0000188-1510915933:132220..133082 | Clytia hemisphaerica | exon |
| TCONS_00014483-exon-sc0000188-1575043694:132220..133082 | TCONS_00014483-exon-sc0000188-1575043694:132220..133082 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000188 | supercontig | sc0000188:130198..133082 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
| GO:0035023 | regulation of Rho protein signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005089 | Rho guanyl-nucleotide exchange factor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0035023 |
regulation of Rho protein signal transduction |
| molecular_function |
GO:0005089 |
Rho guanyl-nucleotide exchange factor activity |
Blast
BLAST of TCONS_00014483 vs. Swiss-Prot (Human)
Match: TIAM2 (T-lymphoma invasion and metastasis-inducing protein 2 OS=Homo sapiens GN=TIAM2 PE=2 SV=4) HSP 1 Score: 132.109 bits (331), Expect = 3.339e-32 Identity = 92/248 (37.10%), Postives = 144/248 (58.06%), Query Frame = 3
Query: 36 SNDALRAFLIARNPKQQHTGTVESYLITPIQRILRYPXXXXXXXXXXXXESDEYNCLYNALRKVEEVADYINEMQRISETYTPLFQNLCKQYPEVEK--SEMDVDNLLHYGRVHWANADYPNRRNSGHSSTFSSMNNNKTEAENLTVFIFKKAIILI-SHHIKAHKKL---NQSQNMKSDI---KFHYFVPISHLILR--DHAWSENDSDQVWEIVDATNECEDE-QTVFVFVNRTGEEKKVFVNAIK 743
++ A +AFL ARNP +QH+ T+ESYLI P+QR+L+YPLL+K ++ L D+ES+E+ L AL+ +E+VA +INEMQ+I E Y +F L + EK +E+ + LL + V W N F S+ + + E LTVF+FK+A+IL+ + K KKL ++ + +D+ KF + +PIS L +R + A +EN+S +WE++ +E E +T+F E K V I+
Sbjct: 1220 TDKAFKAFLDARNPTKQHSSTLESYLIKPVQRVLKYPLLLKELVSLTDQESEEHYHLTEALKAMEKVASHINEMQKIYEDYGTVFDQLVAEQSGTEKEVTELSMGELLMHSTVSWLNP-------------FLSLGKARKDLE-LTVFVFKRAVILVYKENCKLKKKLPSNSRPAHNSTDLDPFKFRWLIPISALQVRLGNPAGTENNS--IWELIHTKSEIEGRPETIFQLCCSDSESKTNIVKVIR 1451
The following BLAST results are available for this feature:
|