TCONS_00013905-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013905-protein
Unique NameTCONS_00013905-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length590

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013905-protein ID=TCONS_00013905-protein|Name=TCONS_00013905-protein|organism=Clytia hemisphaerica|type=polypeptide|length=590bp
MPTRIFKFAILIVVLWFIVLCYLGPTMFQLMEDSRKASNELNRINNAIEQ
LKTSNAKIRRQLEPSQQGAEPESTAKTLSKIDRLNAKIKKELSSKLENAE
ASITQLQSELNKAKELNNKPKRGSNSANYEILRRRIGNQIKEMWFLVSAS
YSKLMKTLPETAKPGFRSMLESFGEIERITEHDFQELISMDGQQYQRDET
ERKLSTLIQKRLHKLQNPKDCSAAKKLVCSLTKGCGYGCQMHHVLYCFMA
AYATKRTLVIDSNGWRYSSKGWKAYFQPVSDTCTHYGDAAEWSKNHEKEQ
VVNFPIVDSLFPRPKQMPQNVPKEFYERIRQFHGHPFVWWIGQFCKYIFK
YSKPIQELIDKKKEEMGFRGPIVGVQVRRTDKINTEAAFHGIKEYMYWVE
LYYERLKLRQSVEKKRVYLATDDPTVLPEAKQLYPEYEFLSDNDISKSAG
LSQRYTDLSLRGVVTDIQLLSETDFLVCTFSSQVCRLAYEIMNYKHTDAS
QRFRSLDDIYYFGGQEEHRVRALWSNEAKSPRQLSFDMGDILGIAGNHWD
GQAKALHHRSGKEGLYPAFKVEDVHDVADYPDYSDLDAET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007760XLOC_007760Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013905TCONS_00013905Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR027350GT23_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..61
NoneNo IPR availableCOILSCoilCoilcoord: 89..119
NoneNo IPR availableGENE3D1.20.58.70coord: 26..511
e-value: 0.0014
score: 18.0
NoneNo IPR availableGENE3D2.30.30.40coord: 513..586
e-value: 4.2E-7
score: 29.1
NoneNo IPR availableCDDcd11300Fut8_likecoord: 202..512
e-value: 0.0
score: 522.964
NoneNo IPR availableCDDcd11792SH3_Fut8coord: 521..573
e-value: 1.32896E-16
score: 73.7807
IPR001452SH3 domainSMARTSM00326SH3_2coord: 518..575
e-value: 8.3E-6
score: 35.3
IPR001452SH3 domainPROSITEPS50002SH3coord: 515..576
score: 9.143
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 515..581
IPR027350Glycosyltransferase family 23 (GT23) domainPROSITEPS51659GT23coord: 223..506
score: 114.345

Blast
[Close]
BLAST of TCONS_00013905-protein vs. Swiss-Prot (Human)
Match: FUT8 (Alpha-(1,6)-fucosyltransferase OS=Homo sapiens GN=FUT8 PE=1 SV=2)

HSP 1 Score: 507.679 bits (1306), Expect = 6.815e-175
Identity = 260/590 (44.07%), Postives = 365/590 (61.86%), Query Frame = 0 
Query:    3 TRIFKFAILIVVLWFIVLCYLGPTMFQLMEDSRKASNELNRINNAIEQLKTSNAKIRRQLEPSQQGAEPESTAKTLSKIDRLNAKIKKELSSKLENAEASITQLQSELNKAKE-LNNKPKRGSN--SANYEILRRRIGNQIKEMWFLVSASYSKLMKTLPETAKPGFRSMLESFGEIERITEHDFQELISMDGQQYQRDETERKLSTLIQKRLHKLQNPKDCSAAKKLVCSLTKGCGYGCQMHHVLYCFMAAYATKRTLVIDSNGWRYSSKGWKAYFQPVSDTCTHYG--DAAEWSKNHEKE--QVVNFPIVDSLFPRPKQMPQNVPKEFYERIRQFHGHPFVWWIGQFCKYIFKYSKPIQELIDKKKEEMGFRGPIVGVQVRRTDKINTEAAFHGIKEYMYWVELYYERLKLRQSVEKKRVYLATDDPTVLPEAKQLYPEYEFLSDNDISKSAGLSQRYTDLSLRGVVTDIQLLSETDFLVCTFSSQVCRLAYEIMNYKHTDASQRFRSLDDIYYFGGQEEHRVRALWSNEAKSPRQLSFDMGDILGIAGNHWDGQAKALHHRSGKEGLYPAFKVEDVHDVADYPDYSD 585
            T  +++ +LI+  W  +L Y+G  + +  +    +S EL++I   +E+LK  N  +RR  E  +    PE        I R+                     L+ +L KAKE + N  K+  N    ++EILRRRI N  KE+WF + +   KL        +      L   G  ER    D   L   DG    R++  + L+ L+Q+R+  LQNPKDCS AKKLVC++ KGCGYGCQ+HHV+YCFM AY T+RTL+++S  WRY++ GW+  F+PVS+TCT         WS   + +  QVV  PIVDSL PRP  +P  VP++  +R+ + HG P VWW+ QF KY+ +    +++ I++  +++GF+ P++GV VRRTDK+ TEAAFH I+EYM  VE +++ L  R  V+KKRVYLATDDP++L EAK  YP YEF+SDN IS SAGL  RYT+ SLRGV+ DI  LS+ DFLVCTFSSQVCR+AYEIM   H DAS  F SLDDIYYFGGQ  H   A+++++ ++  ++  + GDI+G+AGNHWDG +K ++ + G+ GLYP++KV +  +   YP Y +
Sbjct:    5 TGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRI---PEGPIDQGPAIGRVRV-------------------LEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPE 572
The following BLAST results are available for this feature:
BLAST of TCONS_00013905-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT86.815e-17544.07Alpha-(1,6)-fucosyltransferase OS=Homo sapiens GN=... [more]
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