TCONS_00013676-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013676-protein
Unique NameTCONS_00013676-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013676-protein ID=TCONS_00013676-protein|Name=TCONS_00013676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MYLFSLRFRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV
DPIQSVKGKVVIDAFRLINPNSMVLSPEPRQTTSNLGHLQKPSIQALIHG
LNRHYYSISINYRKNELEQKMLLNLHKKSWMEGLNLKDYNEHCQGNEETV
KTMLDLVKNYHKALEDEDSMTPEQLAIKNVGKQDPKRHLEEKVDDVMNTN
IVQCLGAMLDSISF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007643XLOC_007643Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013676TCONS_00013676Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024969Rpn11/EIF3F_C
IPR000555JAMM/MPN+_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 78..200
e-value: 4.1E-15
score: 56.1
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 9..43
e-value: 3.4E-11
score: 43.1
NoneNo IPR availableGENE3D3.40.140.10coord: 4..76
e-value: 3.0E-18
score: 65.3
NoneNo IPR availableCDDcd08069MPN_RPN11_CSN5coord: 9..191
e-value: 1.96373E-98
score: 288.768
NoneNo IPR availableSUPERFAMILY102712JAB1/MPN domaincoord: 8..71

Blast
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BLAST of TCONS_00013676-protein vs. Swiss-Prot (Human)
Match: PSDE (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 9.593e-134
Identity = 177/206 (85.92%), Postives = 189/206 (91.75%), Query Frame = 0 
Query:    9 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNSMVLSPEPRQTTSNLGHLQKPSIQALIHGLNRHYYSISINYRKNELEQKMLLNLHKKSWMEGLNLKDYNEHCQGNEETVKTMLDLVKNYHKALEDEDSMTPEQLAIKNVGKQDPKRHLEEKVDDVMNTNIVQCLGAMLDSISF 214
            RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLIN N MVL  EPRQTTSNLGHL KPSIQALIHGLNRHYYSI+INYRKNELEQKMLLNLHKKSWMEGL L+DY+EHC+ NE  VK ML+L KNY+KA+E+ED MTPEQLAIKNVGKQDPKRHLEE VD +M +NIVQCL AMLD++ F
Sbjct:  104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309
The following BLAST results are available for this feature:
BLAST of TCONS_00013676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSDE9.593e-13485.9226S proteasome non-ATPase regulatory subunit 14 OS... [more]
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