TCONS_00011837-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011837-protein
Unique NameTCONS_00011837-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1563

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011837-protein ID=TCONS_00011837-protein|Name=TCONS_00011837-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1563bp
METAAYQDELEDQLGSFPKSFSFENDLKSHVSRPRLESRMSICLPSKGFV
NGPGENNCFLNAAIQLLWHVNVFRRSFRLLDGHVCVENACIFCSLKKVFK
QLEGSDESVIAADDMRLAMANAFVDERRFQLGRMDDAAECFENILTRLHF
HTARNEAEESCSVPHCIPHQKFANHILEQTFCKCKATSEPKPYYQFVYYV
AASALVQQAKICQHEKRPLVLGDLLKRTSQYGDIRPCPDEKRCKYKGHPE
NLTRIENTLLNRPDVVTVGIIWDTDSPSSSYIVDVMDCISERLFMVDLFD
HVLDEDYKRVEMKLTGVVTYYGRHYTSFFYNIREKQWLFFDDAQVSKIGP
SWSNVKHKCERTRFQPLLIVFTNGTGSLVNTEQALPITEIVSKEVLLKVH
PIVKPPHRSKHKNRKHKKHRHTSNRSSPLPSPDKTSERTSSRSSNGSPAP
SPRLNLTDTFDHKYVTKLNDDPSYSRPPKALLNMKGSASADSIVDMANGD
YDFVDSSHRKRSGSMKKRVGNVFKSMKNPKSSKTKTQSASTPSPDIEAPM
VAADVGFTSPYNKRSHTKETPQQPPPRSPKSPHRSRQPPRSPKMHHTMLS
NSEPEDSPKMQRKNVKNLSSKPSEDSPKTQIKNLEAHKDNLGKSSHGHKT
HRHQNGHTSKSSRSSPVIEDRFSESDHSPQHSQPPPRNDLIHFNSRPVVV
DDYKQNAEALALFQDLLSRGEMHMQNAEVCERKGDLLYALRWCTEATLAF
RDASRVPGISPDLQQYVDSKRNQSFVKSQQLQHEVDAFLRDEVPSPYNHA
ELARANSTSGYSSMSDGTIISEYSTTSSKPSTSSRQMPPPNYYDREEERH
NPPPPPIPARQQQQQNIHDIHDMINQQNISARHQALQRVRQNHQPPSHLP
SPSSPQRQWTTSSVDSIRRASFGILPQQQARQRGAFPPPQGAGGSNTGGY
RQPPPYGSQTLPNPHRGGGPSIKWVVDKPNNEHQPEDSYFDDYHSKTSEN
RLDDDTDRLLKEVPQNLQKPEIPTGGRSPTHDYSPTTIYDNDLAHSQKSL
TVGRYNSSDYSDSTRNRGNFGDKTYDDPPSQTHKSVTVGRYPDSEHPRNR
AGSDIPTRPDHLELDSTRNRDYSSDYETKPQNYITSSNPEAREQNSLRPD
SIRRLGQGSSPPTSSYHVSNTDRKTFSRTSSDASESRLPANRKTIEESRS
SVGTTSFNDTLPEPRKPFDRTKDDVRNTRSESFNSVSSHGSSSSKPLYIE
HPRKPFDPTLNDTKTTRSGSVNSVSSNLSDSTPKEIPRMLEEPKDRRQEA
RSIYDNIEYNDKDLFKERLGGKFDSHKNDINKTTVNSTNKETVGITDKIP
TIVNTPQTIYDDTSNTDEVTNKETRTPSASELIKRLNNQNKTENNNCAKI
ATAGSLTVKTNQVAPKMILNTETVQMEIKSNTPSTNLVEITTKDIVNRFN
HSLHLQPNSSATDHKADANTLQRLTKEGRISARCRQCKWRKVENEGDFCK
ECRTEYLSTLKKRVTGPETGAPPSDTLEKLRRGNTKKYKCIQCGWRQVEY
EDGYCENCQSEYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006650XLOC_006650Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011837TCONS_00011837Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 45..373
e-value: 9.6E-24
score: 83.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 804..865
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 884..1298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1357..1378
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 133..351
e-value: 4.95719E-8
score: 53.641
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 55..357
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 56..350
e-value: 1.5E-17
score: 63.9
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 47..374
score: 20.748

Blast
[Close]
BLAST of TCONS_00011837-protein vs. Swiss-Prot (Human)
Match: UBP54 (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Homo sapiens GN=USP54 PE=1 SV=4)

HSP 1 Score: 352.443 bits (903), Expect = 4.045e-99
Identity = 158/353 (44.76%), Postives = 230/353 (65.16%), Query Frame = 0 
Query:   45 PSKGFVNGPGENNCFLNAAIQLLWHVNVFRRSFRLLDGHVCVENACIFCSLKKVFKQLEGSDESVIAADDMRLAMANAFVDERRFQLGRMDDAAECFENILTRLHFHTARNEAEESCSVPHCIPHQKFANHILEQTFC-KCKATSEPKPYYQFVYYVAASALVQQAKICQHEKR----PLVLGDLLKRTSQYGDIRPCPDEKRCKYKGHPENLTRIENTLLNRPDVVTVGIIWDTDSPSSSYIVDVMDCISERLFMVDLFDHVLDEDYKRVEMKLTGVVTYYGRHYTSFFYNIREKQWLFFDDAQVSKIGPSWSNVKHKCERTRFQPLLIVFTNGTGSLVNTEQALPITEIVS 392
            PSKG  N PG+N+CFLN+A+Q+LWH+++FRRSFR L  H C+ ++CIFC+LK +F Q + S E V+ +D +R A+A  F DE+RFQLG MDDAAECFEN+L R+HFH A    E+ C+  HCI HQKFA  + EQ  C  C ATS+P P+ Q V+Y++ ++L  QA IC  E+R    P + G+LL+  S  GD+R CP    C  +       RI   L+N P ++T+G++WD+D   S    DV+  +   L + DLF  V D+  K+ E+ L G++ YYG+HY++FF+  + ++W++FDDA V +IGP W +V  KC +  +QPLL+++ +  G+ V+T+   P  E  S
Sbjct:   29 PSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQLTTHKCMGDSCIFCALKGIFNQFQCSSEKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAQHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQA-ICMLERREKPSPSMFGELLQNASTMGDLRNCPSN--CGER------IRIRRVLMNAPQIITIGLVWDSD--HSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPQGTPVSTQDLPPQAEFQS 370
The following BLAST results are available for this feature:
BLAST of TCONS_00011837-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP544.045e-9944.76Inactive ubiquitin carboxyl-terminal hydrolase 54 ... [more]
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