TCONS_00010249-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010249-protein
Unique NameTCONS_00010249-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length749

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010249-protein ID=TCONS_00010249-protein|Name=TCONS_00010249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=749bp
MNVEDDGSEEGELKDDELNYDGGAGDVNIDDGDSDVNVDDGDSDTEEDRF
VINTETEDTEAEGEMVNEILQHQDEESVDSEMMAIHHKLSKNDGAGDGKS
DDLKTLSEKESKKINFSKQISTIKDVSTDNENENSERTTIMVLDEGDEIE
DNIDDDDDACKIDWQQTAVIPKPHLFTEAMFNQFCSPQRLNIQKINICEQ
ILKEQRFSQSKQKSKNADDQNNQKTEKKSLIENTFKLKTKYHLTLMEPKP
SRISPGDRYFYMKYMEHVTKKNNDKFLRQHEDRFKEMSRIVRQEQSEYTT
HLYQCFMANPAEYFFINQQVKQFIKNNNMERIKGLLAEKKRCFSLKQTIN
MKQVQNNPQIKFDFLGECAKQQDKINRLHIPALHTTLMENGIPQSPKFSP
SPFNPTQLCEEKRCPMFAHQDALLAIMESLAIPTREWLIPVHIDYNKNLG
RSVIRIEEPLPRRNIAIREANRIFYQNNFLKASQTNNVNMFSCGSHRILI
ESSVDASEEENYQQTFSVNAKIELQPSIGFETFSILDLCHMWWSSKLANT
SQIACCRIDPRNDMLRKIEYYTRAMLCGPGCPYNPHYFYSQLNYLCDILC
TAQPGRYVLEHASGNAFFFLFEEKEKGFTTFETKYKDLLSNKNELIMTNQ
VSAAWLPLDTNIPRNVDGIPCLFSPNVQKQEFIALGKRAKTNKKSGKKRK
HSDKKLVSPISTPSQKFEDDLLHPGTEDETRSPVFKDPISYGNSLDELF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005765XLOC_005765Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010249TCONS_00010249Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019535ICE2_C
Vocabulary: Cellular Component
TermDefinition
GO:0008023transcription elongation factor complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0008023 transcription elongation factor complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..749
IPR019535Little elongation complex subunit 2 , C-terminalPFAMPF10505NARG2_Ccoord: 475..673
e-value: 2.8E-19
score: 69.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010249-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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