TCONS_00007937-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007937-protein
Unique NameTCONS_00007937-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length117

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007937-protein ID=TCONS_00007937-protein|Name=TCONS_00007937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=117bp
MSNTSTKSIPVRRVQIHEAHQMPSRYSETPGGTIFSTTPGGTRIIYERKF
LLDLKSSPLSQTPTKLPVIPGVTLDDNGKIIEEDESDLQTLAEETKPPQV
PKEEKKPTDDDMFEMEM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004476XLOC_004476Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007937TCONS_00007937Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008606EIF4EBP
Vocabulary: Biological Process
TermDefinition
GO:0045947negative regulation of translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0008190eukaryotic initiation factor 4E binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045947 negative regulation of translational initiation
molecular_function GO:0008190 eukaryotic initiation factor 4E binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008606Eukaryotic translation initiation factor 4E bindingPFAMPF05456eIF_4EBPcoord: 3..117
e-value: 2.9E-37
score: 127.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Blast
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BLAST of TCONS_00007937-protein vs. Swiss-Prot (Human)
Match: 4EBP2 (Eukaryotic translation initiation factor 4E-binding protein 2 OS=Homo sapiens GN=EIF4EBP2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.767e-27
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 0 
Query:    4 TSTKSIPVRRVQIHEAHQMPSRYSETPGGTIFSTTPGGTRIIYERKFLLDLKSSPLSQT-PTKLPVIPGVTLDDNGKIIEEDESDLQTLAEETKPPQVPKEEKKPTDDDM-FEMEM 117
            + +++IP R V I +A Q+P  Y  TPGGT+FSTTPGGTRIIY+RKFLLD ++SP++QT P  LP IPGVT    G +IE+ + ++  L           + K    DD  FEM++
Sbjct:   12 SQSRAIPTRTVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLLDRRNSPMAQTPPCHLPNIPGVT--SPGTLIEDSKVEVNNLNNLNN-----HDRKHAVGDDAQFEMDI 120
The following BLAST results are available for this feature:
BLAST of TCONS_00007937-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
4EBP26.767e-2746.55Eukaryotic translation initiation factor 4E-bindin... [more]
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