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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007937 ID=TCONS_00007937|Name=TCONS_00007937|organism=Clytia hemisphaerica|type=transcript|length=957bp
tgaaaatactaTATATTGATTCAACCTTGCTGGAAAAAACCAACGTGCTG
AAGCTGAACATCATAACAAGAAGTGACGctagaaaaaccaaaacaacacC
AAAACATCTTCAACAACCCATCCTATCATCCACATCCTTGCATCCAAATT
TTGGACTCTTTCATCATGTCGAACACTTCCACAAAGAGTATCCCAGTGAG
GAGAGTCCAAATCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAA
CACCAGGAGGAACGATTTTTTCAACTACCCCTGGAGGTACCAGAATTATT
TACGAGCGCAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAAC
ACCAACGAAGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCA
AGATAATTGAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACA
AAACCTCCTCAAGTTcctaaagaggaaaagaaaCCTACCGATGACGATAT
GTTCGAGATGGAGATGTAATATGTCAGAATTCCTCTCGCCTTGAATATGC
TCGTTGCTGGTACCGAATTGTAAAGAATACtccaaaaaaaagaataaaat
gttccaaaaaagaaaaaaagATTGTTGTCATTATTTTATTGCTGGTGTTT
TCTGGAGGTTGGGATtcaagaaaattcttttttatcaaGGTGCTGTTTAT
GTACCGACTTTTAAACTCTTAGTGAAATAAACTAGTGGAAGAGTTGAACC
TCCTTTGCTCTTCAACCTAGTTTCACTTCTGTAAATAACTTCAAAAGTGt
cgaattttattatttgaccATCCATTATATAGCATTTATTAACGAAAAGC
TATCTTGTAACATACTGTTGAacgcaaaaagaaaattttttaaatcgggA
AGATTCATCTTGCCTTCCGAATTCGATTCCCACTCTGGTACCACGGCTCA
ATAGACA Run BLAST on NCBI protein sequence of TCONS_00007937-protein >TCONS_00007937-protein ID=TCONS_00007937-protein|Name=TCONS_00007937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=117bp
MSNTSTKSIPVRRVQIHEAHQMPSRYSETPGGTIFSTTPGGTRIIYERKF
LLDLKSSPLSQTPTKLPVIPGVTLDDNGKIIEEDESDLQTLAEETKPPQV
PKEEKKPTDDDMFEMEM Run BLAST on NCBI transcript from alignment at sc0000080:580895..591723- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007937 ID=TCONS_00007937|Name=TCONS_00007937|organism=Clytia hemisphaerica|type=transcript|length=10829bp|location=Sequence derived from alignment at sc0000080:580895..591723- (Clytia hemisphaerica)
TGAAAATACTATATATTGATTCAACCTTGCTGGAAAAAACCAACGTGCTG
AAGCTGAACATCATAACAAGAAGTGACGCTAGAAAAACCAAAACAACACC
AAAACATCTTCAACAACCCATCCTATCATCCACATCCTTGCATCCAAATT
TTGGACTCTTTCATCATGTCGAACACTTCCACAAAGAGTATCCCAGTGAG
GAGAGTCCAAATCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAA
CACCAGGAGGAACGATTTTTTCAACTACCCCTGGAGGTAAAACTTGTACA
TACTTTTAACTTGCTTCTTCTCTGTTTAAAATATAGTTCCGTTTCGTTAG
ATTACCTTAGGATGATTCTTTTTGATCGGCTAATCAATTGACTCTTGGTG
AATATCTATTTTGTTGTTTGGTTGTTTGGAGACCAATCCAATGTGGCCAT
GACACTTTCAATAAGTTCCCATATATATGGGAACACCATGCCCATGTTGT
TAGCACCTTTGACTGACTGCATTATTCCCCTCAAATGGATAGGAAGCCAA
GGAAGATACCTTCTTTATTCCTTCAAGTGAACTGCTGCAAGTTAGCTCGG
TGCGGTAAAATGCATAGTTCAATAAAACGCTGGTTTTTCGTAACACAACA
GAGGGGGTGTGCTGGGACCATTCTACGTCATGCTTCTAATTGAAGGAAAA
CCAACCAATACACCGTTTAGGAGTGTCGACTGCGCACGCGTCAATCCAAT
TTTCCATTGTTTTGATTTTAGCGATCACGGAAAATTCACTCTCCTCCGTA
AAAAAACGGTAGGTAAACATTTGGTTCTCATAAGGAAACATAGTAGAAAA
ATGGTAGGTAAAGAACTCCTTTTAATCATAACTTCTTTTCCTCTTGATGA
ATTTTTGTGAAATTTTCAGAAGAGACTTATAAAATTATCAATGATATCAT
GTTCAAATATCTAAATCATTCTCTTTAAAGGAGAGACAAAAATTCACAAT
GTTTACATTCCTCTAACCTTTCACAGTACTAAAGTGCGCATTTTTACCTA
CCATTTTTACCGGGCCTCTGCAATGGAGTACCGTGAAATGGCGAGACTCC
TAAACGGTATATTTCTTCAAGTAAAGTCATCTGGAATTAAAATTAGACAA
ATTTCATCTTGCATTGTCCAACAAGAGGGTTATTCCAAAAATATTTAAAG
AATGATACAAAAATCTTTCACCAATCCCTCAGAAATTAGGGTTAGAACAA
CTATCGATGCCATCTTACGAGGAAAGAATCACCTGGAAAATATGAAACAT
GGTTAGGTTAAGTATATCTCAATAATTTAAAACCTTGCCAAAAGGTGGCT
AATTTCTAAAACTGCTGTTAGAAAATATTCAAATAAAAAATGGTACATTG
GCATTGTTAGGGGGTTAAAGGGGATGTTGTTTATTGGCAATGCATTTGGG
TTAAAAAGTTGATGGGCTAATGGTGTAACAAAGCTTAAAGTTTGTAATGT
TCGGTTCCTTTTGTTGAATTGAATTGAATCAATGCTGATTATGCTTTGTT
TGAGACAATATTATGACTTTACTGACAAATAATAGGGCAAACTGGCTAAT
ATTGTAACATGTTACTTCTTTCTTTAGCCAATATCTTTGGTTTAACTATG
TGCAGTTTCCGGAAATAACAACGGTGGGTAGTTAACCCCTTAAAGTCTCA
TTTCCAAACCAAAAAGTTACGCAAACCAAAATAATTTTGTTTCTGGTCCA
CTGGGTGACAATAAAAACACTCACCTGGCCAGCTGGGAAAAGTTTTTTGC
TGAATTTCGATTCCAAAACTCAATTTTTTAAAGCACAAAACTGCAGTAAT
TTGACACCGCTAATATAAATATAAATTTTTTAAGGAGAACTCAATAACAA
AAGTCTTTCAAAACGACGATGTCATGTAGAAAGGTGATTGAAGGAAACGA
ATTAGTTTCAGTGATGGCTAAGGCCACATATAAATATATTGTTTGTAATA
CATTATCTAAATGAAAAGAAATAAGAATATAGACTAATCTGAACATCTCC
CCTTCCCAGAGAGGTCATGGTCACTGTAGATAGTGTTCCGTTTCTTTTTA
TATATACAGTTCAATGTTTCTTTCCCCTAATGGCAGGGAGCAAGTGGTTG
TTGTTCCAAGAGGCCAGGCGCGTTATGAGATGCTAATCGTCGTCGGATAT
TTGATGACGATCTGGTAACTGTTGCTTGTGTTGGCTGTGCTGGCTGAGGC
TGAGTGGCCTAGGAACTGTTGGATGAGGAATAGTTGGAGAAGTGGTCTCT
AATGGTGAGGATGGAAGCAGATTGGTAGGTGTGGGTAGTGCTGTTGGTGA
TACAAATGTTGCTGGTGGAAGGAAGCAACGATTTTGCAGCCGGTTGTCTT
GCGTCGATCACCCATGATGAGTGAAGCTGGTAGTGGGATGGGTGTGTGGG
TATGTGGTCATGCAGCTGGCGGTGAAATAGGATTTGGGCAGGACTGAGTT
TGAGATCTGGTAGAGGAGTATTTCTGTATTGTAAGATTGCTCAAGAAACC
TTGTTGTTGTCGATTGTGCCATTTGGTGATACGTTATCGAGTCCCCGTTA
GACTGGGGGTACTCTGCTGATGGTAGACGGTGTTTGACTTTCCAATCTGA
TAAGAATTGTTGGAACTTGTTTGCGGTTAACTGAGGTCCTCCATCTGAAC
TGAATTCTTCTGGAACGCTTAGATAGTGAAGAGGGTGCAACAAGTGGATA
TCAGGGTGTCACTGGTGGCTTCATTGGGTCTAAAATGATACAGGCAGTTC
CAGCCGCTATATTTATCAATGATCGTCAAATAGTTTTGACTTGCAATAAT
GAAATAATCACAGGTGATCATTTGGAATTGATATTGCGGTGGAGGGCTTT
GGATGATCGGTTCCTTGGGCTGACTAGTGACTGATACAAGTTTTACAGCA
GTCACAGATTTGGTGGATATCTTTGTTGATTCCCGGCCAATAGATACAAT
TGTTCTCTTGAGCCTGCATGTCTGTGCAGCCTTGATGGGCAGAATGAAGG
GCTTGAAGGATCTGATGATGGAGGTTATTGGGTATTACGAGGCGTTTGTC
TAACATTATGAGGCCATTCCAATGCGATATATGATTTCTAACTTCCCAGA
ATGGTTGTAGATTGATGCAACACTCTCATGGTCTCCTTGTATGAATCGAT
GGAAGCTATGTGGACGCATCCATTTTCCAGGGCATTACTGGATGGTGAAT
CTGAGGGAATGGCTCTTTAGCTTTTGAATGCAAGGATTCTTTACTGAGCT
GAGGTCCCGATTGTTGAAAATACCCAGCAATGGTTCATGGTCTGTCGTGA
TGATCAGGTTGTTGCACCAGGCAACGGCAAGTGCTTCTCCTTCTGTTGAG
CTGTACTGGCTCTTGGAGTCGGATGTGAATGTTGAGCCTGCATAGATGAG
CTTCCATTCATCTGGACAGCATACAGGTGCATTCTTTGTGTCACATTTAC
AATGCTGTTGTAGTAGTAAATACCCATATCCGTCCTTGCTCCAATCAGTT
TGTAAACAAGTTGTGCGCTTATAGTTGAACGAACAATTACCTTTTTAAAG
GGGGGGGGGAACCAATTTTCCAATTTTGGATGGGTGATGGGGGAAAATGA
AAATTTGAATAGTAAAGGGGGAAAAAAGAGGGGGTAAAATATCGATAGTT
GGCAAATTTGGTGGGGGAAGTTGTTTTGATTTTATTTAGGATTTTAATTT
TTCATTTCATTGTTGTTTTAAGTCTGCTTTTCTAAGCATGTTTCTTTACA
TTAACCCATTTTCGTTCTATTTTGTCTGGTTTTCCTTTTGCAGCAAAATT
TTACGTTTGTGCCAGGTTGAAATTTGAGAAATTTATATGGGTATATGGGG
GGAACTGATATTTTCCGAATTTTCTGGGGGAAAGCAAAAAAGAGGGGGGA
AACAAAAAGCTGAAAAGTCATAGGGGGGAAAAAAAGAGGGGGAGATTTAA
AAAAATCAAGAATTTGGTGGGGGGGACATACCCTGGAGGACACTATGAAG
GACACTATGAACCCAAGTCGTGAGATGTTGGCTCTCCTCGTCAATTGGTA
CAGAAAGGTATCCGTCAACTGCATCCAAAACAGTCTTCTTGGTATTGGGA
GGTACTTGACATGCAAGTTGGAACGGGGAGGGACAATGGTGAGTTTTGCG
ATTACACTGTATGTTGAGTTGTTGGAGGTCAACTGTTCGTCTAATATTGC
CGTTTTTCTTTCTGGCTGTGACCATGGTGGTGCACCACTCAACTGGTGTT
CCGATTGGTACAGGTGCTATAATGCCTCTCTTGACGTCGTCGTCCAGACT
CTTCTTGACTGCTCCCTTAAGGTGGAAAGGCACTGGGATGGGGTTATGAC
AAACATGTGGCTTTGCATTAGGTTGAATACGTGGGCGGGTTTTGTATCCA
TGGATGGAAATGGTCAATCTCTGTTGAACATAGTTTTGGAAAATTGTTCT
AATAGATAATGTTTGAGTTTCGGAACGTTTTCCCCTGTAGGTTCAAATGG
TAATTTTTCTGGACGTTGAGGTAGATTACTTGGCAGGGTGTCAACCGAGG
AAACGGTTGTTGACATGGGATATGGAAATGTCTCTGGTAAAATGTTCATT
TCTGTACACCCTTTACGGCTGACATAAATTCTGTCAACTTTTTCACAAAT
GTATAGCGTTGAGTAGTAGTGTGATTGTCTATTGTGAAAGTCATTGGTAG
CCAGCCAGAACAATGTAATGTGGATTCGCCAACGGCTCGAACTAGTTTAT
TGTATGGGATCAACGATTGTTTGTTTAGTTTGAGTTTATTCAAATGTTGC
GGTCCAGCTAAACAAATGCTAGCTCCACTATCAGGAAAGATTTTCATTGA
CGTTGGTGTCGGTTTGGTCGTATTGGAGGTTGGAGTAAGTTTCGCATTTA
TTTCAGTGATCTCTGCAGTTGGACGGAACGCTTTGCTTTTTTCGTCATAG
GTGACATGGGCCAATAGTGCTTCGGCTGTTTCTGATTTTGGTTTCTGACA
CACTTTCGAAAAATGATTTGATAATTTGCAATTGTGACATGTCTTCCCCA
TGCTGGACACATGGATGACCGTTCTTTTGATCCGTGGGTAAGGCTGCCAC
AACCAGAACACGGAGCTTGTCTGGTTGGAAGCTTTTGGCAATGATATTGC
GATGTTCGGACCGCCATTGCATCGGATGCATCTTGTAAGCTGTCATGATC
TTGGAGGGCCGTTTCGTAGGCTTCTGCATGCTTGACGACATCTTCCTTAC
TGTTGAGGGTGGTGGCCTTAGCAAGGATGTCGACCTGTAGAACTTCGTTA
TGTAAGCCCCGGATCAGTTGGTCTCTGATGTACGAAGGTGAGAGATCATA
ATGACATTGCAGGCACGAAAATTTGCAGTCTTGGGCTGATGACTTTAAAC
GAACTAGATAGTCCCTTAGTTGTTCATTTTTGTGCTGCGATAGTGGTGAA
AATTGCATTCTGTGGACGGTTGGATTCAACTTTTTCGTAACAATGGTTTC
AATGGCATTCAGGCAGTCGTTCTCATTGAATGTTAGAAAGTTTGGATGGT
TGTTGATGGTACTTGTTTGGGTAGCATCGTCACATGCGTTGTAAATCATT
GATGCAATCTGGTTTGCTGAGATCCCTGCGATTTGTTTGTAAACAGCCCA
ATCGATTGTGAATTTATGAAACTGCGGATGGGTCATGTCAGACGTAATGG
AAGGTAGTTTTGCAGATTTATGTGAGGCGGTTGGTACGACAGAAGGAGTT
GGATTAGTTGTAGCATACGTAGTCGAGTCTGGGGTACTGATACTACAGAT
GTGGTGGAGAATCTTCATTATATCCCCAATAACTGTAATGCCCAGGTCTC
TAGGGCAATATCTCTAATGTCATTCGATTCTCTGTGAAGCTCTTTGTATA
CTGGTGTGCAGCTTCTTCTGGGATTCCAGCATCCCGCAGGTATTTTTCCC
AGTCTTGATCTGACTGTGACAGCGCCATGTAGAAAGGTGATTGAAGGAAA
CGAATAAGTTTCAATGATGGCTAAGGCCACATCTGAATATATTGTTTGTA
ATACATTAGATCTAAACTAGCCGGTACCCGGCGTCGCACGCCGGTTTAGC
TGTTTGCTGAACGCATTTAAAGTCCTTTGGATGTTGGGAAGGTGGCTTAA
ACACGATGAAATCAAAATTAAAGAGAAGAATTCTCTTCAAAGTTTAACTC
TATCCCTCCCGGGTGACGTATCTTTTAACCATATTTTGAAAAAGATTTTT
GTGGCAAAAATTATCAGAAAGCAGAAAAAGGGCGTCATTCCCAAATTACA
CCATATCGGCGACCAGCGACGTCCGAGACGGCTCTGCAATACACGGGTTT
CTAATTAAATCTGGCGCGAGAGAAAAAATCAAGTAAATAAAAGGAGCGAT
AAGGGGAAATGCCTTATAAAAGGTTGATAGATTTCCTTTCTTCTCTTTTG
AAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNACGATTGACTTTTTATTTTAATGTTTTTTGTT
TTCATAATGACCCATAAAGTCTGTCAAAATGGAAAAATGAGCTAAAATTG
CTTGATACACGGCCAATTTTCGTGCAAATTTACATGGGATCAAAGCTAAA
GCTAAGCAAAAATTTAATTCGAAACCCGTGTAATTAGATTTTTTTTCTCG
CTTCGCTCGCGTTATATTTGCCGTAGTTCTTGATGTTTAGGAAAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGAAGAAAGAATTCTAGTTTTTACCGCCTTTTGAAT
GTATTTTTAATGTTGCTGTTGTTCTAACAAACTTGTCTTGTGATTCTTGT
GTTTTATTTTATAATTGTTCTTTTCTTTAACAGAGATTCTGTTTAAAAGA
TTTCTTTTGTTTTGAAAAGAATTCGAATGTCTTAAATCAAATAAGGTCGT
TAATTACATTCGAAAACATAAAACAAAAAAAAAATAAATAAAAAAAAGAA
AAAGTCTATCAATCAAAACAAAGTCTTTATAAAACGGCGCGAATCTGATT
TAACACATTTGTGGAGCAAGAAGCAAAAGTCATCTTTTGAAAGAACAAAA
CATTGCTTGCGAAAACGAAAGTGACACACAAAAAACAAACAAAATGACAC
ACAGACTACGGCTATTAATATATAGATGAAAAGAAAGAAGAATATAAACT
GATCTGAACATGTCAATCAAACAAGTTCGAATGAGAATCGCAATTGAATA
ATAATCAAACATGATTGAATAACTGCAATTTGATTGTTGAACGCAAAAAC
GGCCAATCTGGGCCAATTCCAGGGTAGGATAACTTTCGATTGGTTTCAAT
TTATTGTCAATTACATTCGATTGATTATGTTCGATTATGATTATTCTTGA
AGTTAAGATTGATTGCAATTGAATTAAATTGACCCACTCCTTTAGATCTT
GAGCGTGGATGGCTGCCCATACACCATCGAAAAATCGGATAAGAGCAAGT
GCATATAAGTACAGCACAAGAGCTATTAAAGAAAGTGAAAGCAATTAATT
CAATCAAACATAATCAAATATAATCAAATACAATTGAACGTAATCAAACG
GCAAATTCTGGGTAATATTTGATTACATCAAATATTCTTCTTAACATCAA
AGATAGATTTGTTTGTGATTGATGCTGCAGAGTGCTCAATGAAATCAGAG
CCAATTTAAATTTTAAAAGTTATCTTTCATCATAAACAAAGTAAATAGTA
CACTACTCCATTTTATTTGTACNCATTCGATTGATTATGTTCGATCATGA
TTATTCTTGAAGTTAAGTTTGATTGCAATTGAATTAAATTGACCCACTCC
TTTAGATCTTGAGCGTGGATGGCTGCCCATACACCATCGAAAAATCGGAG
CAAGTGCATAAGTACAGCACAAGAGCTATTAAAGAAAGTGAAAGCAATTA
ATTCAATCAATTTGATTACATCAAATATTCTTCTTAACACCAAAGATATA
CTGCTAATCTTTTTGATAAATTTTTAATAAATTCAAAGTTCCTTCTGATG
CTTGAGTCTAAACGACATAGGAAGGCTTAAGACATCCAAAAAATAGTCAG
TTGTACACTGTGTTCCTGAATGAAGGGGAACAATGCGTTGATTTGCCTTG
TAAATCTCATAATCTAAGTTTTGGTGTTCTGTAGGATTTAAAGTTTTTAA
TGTAATTTGAACATCAGAATCGGAGAAAGCAATGAATTTTGATATGACTT
CATGTATAAAACATCAAATTTGGTCAACTAGTTCCAAAATTACGAGGTTT
TTAAGGCCGCTACAGCTCAGGCGCTTTGGTAGATTTTCAAGGCATGTTTT
ATACCTCGATTTTCATCAGCATTTCATGTTCTTTCCGCTGGAACCATCAG
ATTTTGAATATTTTCAAAAAAATAATTTTTTGCCCTACCACCTGATGAAG
TCATCTGGCAGGTGGCCAGGTGGCAAAATTTGGTGTTAATATTTAAGATT
AAGTTTTAGACCCTCTATGGATCATCTGTGCCAAGTTTCATGCTTTTATC
ACCATCTGAAGTATTCTTACATTTTTATGTGCTAGCAGACCTCACTAGTC
CACCTCAGGCTCCCTTTGTTAATTATTTAATTATATTGTTTGTTTGTGCT
CTTGATTCATATGAGATTTGTTCTGTAATGTTATATTGAGAACCCATGGT
CGATAGTCAACGCTTCCATAATTGCACTATCTTGAGAATTTCTGTAAGTT
TGCTGTTATGCCTGCTTTCAATCCTTCTCGCCATTCTGGGACTTTTGATT
ATGACATTCCTTTATTACTCATTTAGGTACCAGAATTATTTACGAGCGCA
AGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACGAAG
TTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAATTGA
AGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTCCTC
AAGTTCCTAAAGAGGAAAAGAAACCTACCGGTATGTATTCTCAGCTTTGA
AAACATTTTCAATGTTATTAAGTTTCAACCATTAACGTTCATAAAGAGTA
TCTGAGAAAACTTTTGCAAGAATGCAAGTTTGCAAGAATTTCAAATGTTT
TTGTTCTTGCTAAAACTTTTTCAATTTCTTTATGCAGATGACGATATGTT
CGAGATGGAGATGTAATATGTCAGAATTCCTCTCGCCTTGAATATGCTCG
TTGCTGGTACCGAATTGTAAAGAATACTCCAAAAAAAAGAATAAAATGTT
CCAAAAAAGAAAAAAAGGTTTGTAATGAACAATCAATCAAAAGAAAAGAA
AAGCCAAAAAAAATCAAATCTATCTTTAGCCATAAATGTTGTGTTCAGTT
CTCGTCGATGATCATTTTTTTTATTTTACCGACATGGTGCTGGCTGGAAC
AAAAACCTCCTCGATTGAGGTGCTGTCGAATCCCTGATCTCTGTTTTTTG
TTCTATGTATCTAGTTTGTTTGTAGTTTTTCATTTGTAAATAGTATTCCA
GTAGCTTTGTCTTTGTCCTTCCTTCTCGAGAAGCTTATCTTTAAAAGCCT
TTATTTTGTACTATATTTTATTGGAAGAGAATTTTTATTAGAGTCTTACT
TTTATTTTGTGAGGCATTTTCGTCAATTTTGTCAAGTAAATGCTTTGATT
TAAGAGTGATTGCTGGCGAAAATTTCTCACATATTTTTTCAGATTGTTGT
CATTATTTTATTGCTGGTGTTTTCTGGAGGTTGGGATTCAAGAAAATTCT
TTTTTATCAAGGTGCTGTTTATGTACCGACTTTTAAACTCTTAGTGAAAT
AAACTAGTGGAAGAGTTGAACCTCCTTTGCTCTTCAACCTAGTTTCACTT
CTGTAAATAACTTCAAAAGTGTCGAATTTTATTATTTGACCATCCATTAT
ATAGCATTTATTAACGAAAAGCTATCTTGTAACATACTGTTGAACGCAAA
AAGAAAATTTTTTAAATCGGGAAGATTCATCTTGCCTTCCGAATTCGATT
CCCACTCTGGTACCACGGCTCAATAGACA Coding sequence (CDS) from alignment at sc0000080:580895..591723- >TCONS_00007937 ID=TCONS_00007937|Name=TCONS_00007937|organism=Clytia hemisphaerica|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000080:580895..591723- (Clytia hemisphaerica)
ATGACGATATGTTCGAGATGGAGATGTAAGTACCAGAATTATTTACGAGC
GCAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACG
AAGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAAT
TGAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTC
CTCAAGTTCCTAAAGAGGAAAAGAAACCTACCGATGTCGAACACTTCCAC
AAAGAGTATCCCAGTGAGGAGAGTCCAAATCCACGAAGCCCATCAGATGC
CTTCACGCTATTCCGAAACACCAGGAGGAACGATTTTTTCAACTACCCCT
GGAGATGACGATATGTTCGAGATGGAGATGTAAGTACCAGAATTATTTAC
GAGCGCAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACC
AACGAAGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGA
TAATTGAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAA
CCTCCTCAAGTTCCTAAAGAGGAAAAGAAACCTACCGATGTCGAACACTT
CCACAAAGAGTATCCCAGTGAGGAGAGTCCAAATCCACGAAGCCCATCAG
ATGCCTTCACGCTATTCCGAAACACCAGGAGGAACGATTTTTTCAACTAC
CCCTGGAGATGACGATATGTTCGAGATGGAGATGTAAGTACCAGAATTAT
TTACGAGCGCAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAA
CACCAACGAAGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGC
AAGATAATTGAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAAC
AAAACCTCCTCAAGTTCCTAAAGAGGAAAAGAAACCTACCGATGTCGAAC
ACTTCCACAAAGAGTATCCCAGTGAGGAGAGTCCAAATCCACGAAGCCCA
TCAGATGCCTTCACGCTATTCCGAAACACCAGGAGGAACGATTTTTTCAA
CTACCCCTGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007937-exon-sc0000080-1575043694:591438..591723 | TCONS_00007937-exon-sc0000080-1575043694:591438..591723 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1575043694:581944..582147 | TCONS_00007937-exon-sc0000080-1575043694:581944..582147 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1575043694:581657..581786 | TCONS_00007937-exon-sc0000080-1575043694:581657..581786 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1575043694:580895..581231 | TCONS_00007937-exon-sc0000080-1575043694:580895..581231 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1510915933:591438..591723 | TCONS_00007937-exon-sc0000080-1510915933:591438..591723 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1510915933:581944..582147 | TCONS_00007937-exon-sc0000080-1510915933:581944..582147 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1510915933:581657..581786 | TCONS_00007937-exon-sc0000080-1510915933:581657..581786 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1510915933:580895..581231 | TCONS_00007937-exon-sc0000080-1510915933:580895..581231 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1491911889:591438..591723 | TCONS_00007937-exon-sc0000080-1491911889:591438..591723 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1491911889:581944..582147 | TCONS_00007937-exon-sc0000080-1491911889:581944..582147 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1491911889:581657..581786 | TCONS_00007937-exon-sc0000080-1491911889:581657..581786 | Clytia hemisphaerica | exon |
| TCONS_00007937-exon-sc0000080-1491911889:580895..581231 | TCONS_00007937-exon-sc0000080-1491911889:580895..581231 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:580895..591723 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008606 | EIF4EBP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045947 | negative regulation of translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008190 | eukaryotic initiation factor 4E binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0045947 |
negative regulation of translational initiation |
| molecular_function |
GO:0008190 |
eukaryotic initiation factor 4E binding |
Blast
BLAST of TCONS_00007937 vs. Swiss-Prot (Human)
Match: 4EBP2 (Eukaryotic translation initiation factor 4E-binding protein 2 OS=Homo sapiens GN=EIF4EBP2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.171e-23 Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 175 TSTKSIPVRRVQIHEAHQMPSRYSETPGGTIFSTTPGGTRIIYERKFLLDLKSSPLSQT-PTKLPVIPGVTLDDNGKIIEEDESDLQTLAXXXXXXXXXXXXXXXTDDDMFEMEM 516
+ +++IP R V I +A Q+P Y TPGGT+FSTTPGGTRIIY+RKFLLD ++SP++QT P LP IPGVT G +IE+ + ++ L + DD FEM++
Sbjct: 12 SQSRAIPTRTVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLLDRRNSPMAQTPPCHLPNIPGVT--SPGTLIEDSKVEVNNLNNLNNHDRKHAVG----DDAQFEMDI 120
The following BLAST results are available for this feature:
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