TCONS_00006166-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006166-protein
Unique NameTCONS_00006166-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1008

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006166-protein ID=TCONS_00006166-protein|Name=TCONS_00006166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1008bp
MVTYQNYTNGQIILYGDVCFQSWLLVPGQLLWKDWVQGCFYVCAILFLFV
GIAIVADTFMLSIEMITSKKRIIYTYDRDKNERVEKEVFVWNETIANLTL
MALGSSAPEILISVFETLATLSDTEPAESLGLYTIIGSAAYNMIVITAIC
VMSLPKNTSKRVNEFGVFIITSFWSIFAYLWLIFVIRWWTPNHIELWEAI
LTLLFFPALVISAWVQDKGCWLYKCRRSKLNKHITELHHIEHSVTSHSND
NGAITEVQIQSPVHIQHGTNSKRRKSTGIVSPNLNGISYNDIRLRKVTVD
PSQSQINQKESQNHHQSPIASKAFARARFRHAVVLSMTGKTKQAVSYENN
TTKKFREEQKSFHLKQKIDINENGNNHQKFVLKETASNLGTFCFSSASYS
VTRTSKSLFINVLLNRRSKSKNIGFSHIVDAARRKSWYDIANGLKENDLH
HNAQPIPNNSTQYSSHMAVGVRNSLPDVETDERSSVSPPFSPEHQRLSPP
RAEKYSISRSLEDVSTNNSTIMNNNNNNIPSTLIINQNTALEGHRRPTEC
DLINLKNSSFVSYETREGNAKYQKDFVASAGTLVFKETEYKKTIEIQLTD
RSKQERTTSSTSSDFYIVLKDPCHDSTLGDPSIAHVSIIDDNEPGEFLFQ
NATAHVQYRLCNVAMVTTTVVRIRGSDGPITVFYRTINGTAIGGDEIDLN
KQTCDYEFVEKGMLHFENGETSKNIMIKTNPKADKSRTFIIALYHVTGSA
KIGHRCAAVVSLSSENDEIVDQITSLTENEEESVLTRKQEFRKQIKESMT
LDEDPSIIDMILHVLCFFWKVAFAFIPPRSVWGGWASFIVSLLLLGVLAA
LVEQFAKLLGCVIGLHVSVTGITLVALGTSMPDTFASKTAALQDDSADAA
IGNITGSNSVNVFLGLGLPWVIKATYLYSKNQKLEIQGENLLFAVLVFLS
CGFVTLLLLVLRRVFGGGELGGSSCSKFTTGFFMISLWFVFVVCTALQAY
GIIPTNAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003515XLOC_003515Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006166TCONS_00006166Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004836Na_Ca_Ex
IPR003644Calx_beta
IPR004837NaCa_Exmemb
Vocabulary: Molecular Function
TermDefinition
GO:0005432calcium:sodium antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006816calcium ion transport
GO:0007154cell communication
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006816 calcium ion transport
biological_process GO:0007154 cell communication
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005432 calcium:sodium antiporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004836Sodium/calcium exchanger proteinPRINTSPR01259NACAEXCHNGRcoord: 865..877
score: 53.85
coord: 852..863
score: 31.14
coord: 839..851
score: 47.37
coord: 878..891
score: 84.21
IPR003644Na-Ca exchanger/integrin-beta4SMARTSM00237NIbeta_1coord: 634..744
e-value: 1.6E-5
score: 34.4
coord: 520..620
e-value: 0.097
score: 6.1
IPR003644Na-Ca exchanger/integrin-beta4PFAMPF03160Calx-betacoord: 555..607
e-value: 8.9E-7
score: 28.9
coord: 635..730
e-value: 3.5E-6
score: 27.0
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 41..214
e-value: 6.8E-21
score: 74.7
coord: 835..994
e-value: 2.1E-23
score: 82.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..506
NoneNo IPR availableSUPERFAMILY141072CalX-likecoord: 665..767
NoneNo IPR availableSUPERFAMILY141072CalX-likecoord: 557..656

Blast
BLAST of TCONS_00006166-protein vs. Swiss-Prot (Human)
Match: NAC3 (Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8A3 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 5.140e-69
Identity = 169/522 (32.38%), Postives = 249/522 (47.70%), Query Frame = 0
Query:  554 NLKNSSFVSYETREGNAKYQKDFVASAGTLVFKETEYKKTIEIQLTD-----------------RSKQERTTSSTSSDFYIVLKDPCHDSTLGDPSIAHVSIIDDNEPGEFLFQNATAHVQYRLCNVAMVTTTVVRIRGSDGPITVFYRTINGTAIGGDEIDLNKQTCDYEFVEKGMLHFENGETSKNIMIKT--NPKADKSRTFIIALYHVTGSAKIGHRCAAVVSLSSENDEIVDQITSLTENEE-----------------ESVLTRKQEF----------------------RKQIKESMTLDED-------------PSIIDMILHVLCFFWKVAFAFIPPRSVWGGWASFIVSLLLLGVLAALVEQFAKLLGCVIGLHVSVTGITLVALGTSMPDTFASKTAALQDDSADAAIGNITGSNSVNVFLGLGLPWVIKATYLYSKNQKLEIQGENLLFAVLVFLSCGFVTL-LLLVLRRVFGGGELGGSSCSKFTTGFFMISLWFVFVVCTALQAYGII 1003
            ++  + +V Y+T +G+A    D+  + GT+V K  E +K   + + D                 R ++E+         +  L  P   + L  P +A V+I+DD+  G F F+  T HV     ++ ++   V+R  G+ G + V +RT+ GTA GG E        D+E    G L F+N ET K I +K     + ++   F IAL    G  K   R  + + LS +   + D+  ++ E E                  E ++    EF                      R Q  E++T+                PS  D ++H L  FWKV FA +PP     GWA F VS+L++G+L A++   A   GC IGL  SVT +  VA GTS+PDTFASK AALQD  ADA+IGN+TGSN+VNVFLG+GL W + A Y   + Q+  +    L F+V +F    FV + +LL  RR   GGELGG    K  T +  +SLW ++++   L+AY  I
Sbjct:  424 DMSKTMYVDYKTEDGSANAGADYEFTEGTVVLKPGETQKEFSVGIIDDDIFEEDEHFFVRLSNVRIEEEQPEEGMPPAIFNSL--PLPRAVLASPCVATVTILDDDHAGIFTFECDTIHVSE---SIGVMEVKVLRTSGARGTVIVPFRTVEGTAKGGGE--------DFEDT-YGELEFKNDETVKTIRVKIVDEEEYERQENFFIAL----GEPKWMERGISALLLSPD---VTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKTTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFAVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALQGQEFHVSAGTLAFSVTLFTIFAFVCISVLLYRRRPHLGGELGGPRGCKLATTWLFVSLWLLYILFATLEAYCYI 924          

HSP 2 Score: 189.889 bits (481), Expect = 1.618e-49
Identity = 170/618 (27.51%), Postives = 271/618 (43.85%), Query Frame = 0
Query:   41 YVCAILFLFVGIAIVADTFMLSIEMITSKKRIIYTYDRDKNERVEKEVFVWNETIANLTLMALGSSAPEILISVFETLATLSDTEPAESLGLYTIIGSAAYNMIVITAICVMSLPKNTSKRVNEFGVFIITSFWSIFAYLWLIFVIRWWTPNHIELWEAILTLLFFPALVISAWVQDKGCWLYKC--RRSKLNKHITELHHIEHSVTSHSNDNGAITEVQIQSPVHIQ-HGTNSKRRKSTGIVSPNLNGISYNDIRLRKVTV-------DPSQSQINQKESQNHHQSPIASKAFARARFRHAVVLSMTGKTKQAVSYENNTTKKFREEQKSFHLKQKIDINE-NGNNHQKFVLKETASNLGTFCFSSASYSVTRTSKSLFINVLLNRRSKSKNIGFSHIVD--AARRKSWYDIANG---LK--ENDLHHNAQPIPNNSTQYSSHMAVGVRNSLPDVETDERSSVSPPFSPEHQRLSPPRAEKYSISRSLEDVSTNNSTIMNNNNNNIPSTLIINQNTALEGHRRPTECDLINL-----------------KNSSFVSYETREGNAK-YQKDFVASAGTLVFKETEYKKTIEIQLTDRSKQERTTSSTSSDFYIVLKDP 622
            Y  A++++F+G++I+AD FM SIE+ITS++R + T  +   E     + VWNET++NLTLMALGSSAPEIL+S+ E          A  LG  TI+GSAA+NM +I  ICV  +P   ++++    VF IT+ WSIFAY+WL  ++  ++P  +++WE +LTL FFP  V+ AWV DK    YK   ++ + +KH                  G I E +   P  I+  G         G + P L G   ++ R   + +        P +      E  N++   ++ +  +RA +R      MTG          N  KK   EQ     K+   ++E + +  + F+ K          F   SY       ++ + V+      SK +   +  +  +A   + Y+   G   LK  E     +   I ++  +   H  V + N    +E ++     PP       L  PRA        L        TI+++++  I +                 ECD I++                 + +  V + T EG AK   +DF  + G L FK  E  KTI +++ D  + ER       +F+I L +P
Sbjct:   80 YFVALIYMFLGVSIIADRFMASIEVITSQEREV-TIKKPNGETSTTTIRVWNETVSNLTLMALGSSAPEILLSLIEVCG---HGFIAGDLGPSTIVGSAAFNMFIIIGICVYVIPDGETRKIKHLRVFFITAAWSIFAYIWLYMILAVFSPGVVQVWEGLLTLFFFPVCVLLAWVADKRLLFYKYMHKKYRTDKH-----------------RGIIIETEGDHPKGIEMDGKMMNSHFLDGNLVP-LEGKEVDESRREMIRILKDLKQKHPEKDLDQLVEMANYYA--LSHQQKSRAFYRIQATRMMTGA--------GNILKKHAAEQA----KKASSMSEVHTDEPEDFISK--------VFFDPCSYQCLENCGAVLLTVVRKGGDMSKTMYVDYKTEDGSANAGADYEFTEGTVVLKPGETQKEFSVGIIDDDIFEEDEHFFVRLSNV--RIEEEQPEEGMPP--AIFNSLPLPRA-------VLASPCVATVTILDDDHAGIFT----------------FECDTIHVSESIGVMEVKVLRTSGARGTVIVPFRTVEGTAKGGGEDFEDTYGELEFKNDETVKTIRVKIVDEEEYER-----QENFFIALGEP 621          
The following BLAST results are available for this feature:
BLAST of TCONS_00006166-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAC35.140e-6932.38Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8... [more]
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