XLOC_044690 (gene) - C. hemisphaerica

Overview
NameXLOC_044690
Unique NameXLOC_044690
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_66:78792..87964+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044690 ID=XLOC_044690|Name=XLOC_044690|organism=Clytia hemisphaerica|type=gene|length=9173bp|location=Sequence derived from alignment at scaffold_66:78792..87964+ (Clytia hemisphaerica)
ataaacaaatatggcGGCTCATGAGCAATTGTGATTTATCCTCCCACAAA CaaagaaagatatttcttttaaaaacatatcGAATAACAAAGATATTTAC AATTGGAGACTTTAAAAGTATATAGAAACCATTCTAACTACTTTTATCTT ACAAATTCcatttctttttattacagtATACGTCTTTTTTGACAGATTTA ATTAGATCATGATCGCACCACACCATCCATGGTATGCCATACGATGTCTA TCTATGTCTATGTGTGACATCTGAAGACTGAAATAGATAAGCTTGTAACA GTTATCAAATTTCACTGGACAAAAATGTGGTCAAGATAACAGTTGTCACT GAGTGGTACTTTAAGCTTGATTattgtattgtttttttattgctaTTTGC TTTTGAGGGACAACATTGATCAATTCATATAAGAAGACCGTCGTAGAGTC AGAGAGCACATGTCGCAAATATATTCACTATAATAAAGGAATAGATAGTC ATAATATTACCAAATAAAAAACAGCGGAGAACCTAATAAAGACTAAAAAC TATTTCAAGATAATGTATTGCTGCAAAGTTTTTCAACGTCAAAATCCTAA GATCCTTTCTAGCACCCTAAAGACAATTGTAAGCTCCCAAAAATGGAGTC ATCATCAAAGCTCATTGAATGATACAAtaccaaaacaaacaacaagATCA AAAGTGACCGGAGTTGCTGATCATTTTAGTGGAAATGCAGCCGTAAAATT ACCGAAATCTGCTTCAAAGACAGAGAGCAATCTTGAGTTTGAAGATTTTC AGAAAGCTTTCATGGGAAAATCAACAAGAGAAATTTTACGAGCTCTAATG GTTTATAAGCTTTGTTCATTTGATTTCCTGGTGGAAAGGAACAAAGTGGT AAGCATTTTTAAAAAGGGTatcattttttgataattttcaaaagcatgta TATATCAAAATTACAGTTGTCAGTTGAAGTAttccttgatttctaaactt AAGATACCTTTTCTTTCAGCTTATCAAAATTTCCCGAACATTGCTTGGAA AAAGAGgatttgattttttaatgaagaactccttttatggaCATTTTGTT GCCGGTGAGACTCAAGAAGAAATAAAGTCATATTTGTCATTGATGAAGGC CTACGGTGTTGGTGCTATCCTTGATTACGCAGTGGAAGCAGACATTCCCC AATCTACAATCACAGATAggtaatttcaaaacaatttgccaaagattttt aatcggtttttttttgctcaaaaatatatttgctTTCAATTGTTCTTGAG ATGAGATTTAAAAACCTAATATCCTCAGCTATTTTAAGAttctccttttt tatttttagttcaaCTACCGATAAGATTCACggtaattttatttttgatt tttctgaaatattgaaattaaaatctCTAAATGCCCTTTCTAGatgtttt taaatcaatttctgaATGATAATCTCATACCGTAACTTTGTGTAATGCTG ACATACCTTGTCTTATTCCGTCATAGCAACGTAATTTTCTCCTGATGAAT ATTCTATTTGTTAAGTACAGtataataaaaagtaaaatcaaaataataaa agtttttagaaCATTTATTCACATATATATTAATTTTCTTGTGTATAGAG GAGGAAGATGAAATTAACCTTGAAAATCTTGAAGATAAATTCAAAGTTCA CATGGATTTTGCTGACCGACGAGAAAATGTCATTAGTGCAAGAACATATT TTTatgaaggagaagaaaaatgtGACGAAAAtatggaagtttttttaaaa tgtaTTGACACTACAAGTAACACTTCTGAAAATGGTTTTGCAGCCATCAA AGTCACAGCCCTTGGAAGACCTGTTCTATTGGTAAGCAGAGTTCAAATCT TTCTTAGAGACTTTGGCAAAAGctttttctgaaaatagaaTCTCTAATAT TATTCTAATATTATATATATACCTCCAGATTTCAAAACCCTTTAATTAGA CCTATCAAGACTTAACCGctttttttcattattctaaGATGATTTAGGCA AAATCTTTATGTGTTTTAGGCCAAAGTTTTATGTGAATAGTTCCCAAAGT TTTATTAGGTAGAGCCGAGGTATAGCCCCTAGAATAAATTCTTCTTTTCA TTATTTCAGTTACGTTTATCTCAAATCTTGAACCAAACACAAGTCTATTT TGATCTTCTGGCTGAAAATAAAGGAAACTGCATAACTGAGAGATCTTTTG CAGAGGATGCCTTTGAGCATGGATTGAAAGACCTTGGTGtaagaattctt tttttattgtaattaaaaagaataagaTCAACGTCTGGTTATATTATTAG GTCTGTAGAGTCTTCTATGATCCTGAGAACAACCTCCGATTCATTCTGTA TTtattaaaactataaagtgAAAATATTCAAGCTTAATATTCAAAGACTT TTAGGTTGCTCAGGCAAATACCAAAAAATCTCATACATTTTATTGTTTGC TTCCTATGCTACCTGATGCTACATGAATTTATAACTATATCATCAAGGGA TtacgaatttttctttttttgccctACAGGTTGACATGACTTCAGCAGAA GTGAAACAAGTCTTTGATATCATTGATACTGCAAACGATGGGTATGTATC TGTATTTCTTTGATATTAAAAGGTAATCCAGTCTAAAAGATTGATCTGTA AAATGTGAATTGGGACCTGATCatgttcaaaaatagtgtgacatttagtg aactcaaaaatatagtatttcttgaataacttgaaaaatatttcaaatat aacgTTGAAATTTTATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAggcctttattttt gaacacgATCACCTACTCTTATATTTTCCAAGTTGCTTCACAAGACTATT TGTCTATGTTCCTCATAGGtagttttttcatatttctcgTTTTTTGATTC ACCCTATCTtcactttagaaaaattgacaTCCACGAGTGGCACTCGTTTC TTACACCTCGATTGAAACTTGCAAGACTCTTCAGAGCAAAACCAATCACA AAGGTAGGGTAATGTTATTTTATtaaagtttttaagtttttataaTTCTC ATTGGTGTATAAGAGAGGTGTATAAATGCTTAAAAGTATTTTTCCACTTA ATCAGATACATGTAGACTCCACATATAAATGACAAGTTACATAGTTGTTT GTTTAAAGAATCACCGGTAAACTTTTTTCTAGTTCCTTATTGCTGCTCCT TGGTTTGTGGCGTGATAAATCTGTTTGCGGTGTATACACTTAAGGTTTAA ATAGTCACTTATGAATTTGTTTTCTAAAGTTATACCATCTTTAAAAGTTA AACATTACGAAAGTCCTTAGATACTTAAATTCTATTTTAAATGTCAATCT GACATTTTcgaatatcaaaataaatttcatagtTGACTGATAAGATCATT ATATGGcgaaattctttttaaattgataacatgtctttttataagaacca atatATTTAAAATAGGGCTAGCCTGATCATATTTTTCGTGATTTACATAA ATCCTTTGATATTTTTAAGATATTcttgaaatgttataaaattCTACTTA GGGGCCTGATATTAGCCGTTTCTCAAATATGATATTGAGATTGTTCTTTG GTTTGTTCTTGGGCTTTAGACAAATTTAAGGCACTTGTTttattaaattg ttcttatatgtTCAATTGAAAATAGCATGTTTTTTCGCCTTCGACAATTT TTTAGTAGCTAAATCCGGCTACGTAAACATAACTTACTTATGACCTCTTT ATACGATATTCCGAATCGCCCGAGTCttgttaaattaaaaaaaaaacttg ataaaCAGTATTATTGATAATTTAAATGTGCAGACCTCTATTCTTATGTA ACTTTTAACGAAATAATCGATATTAGATTAGATGAAAACAGATATCTGAG GGTCCGGGTTGTCATATTCATCTCATTTTTCTACTTGCCACACCTCCAAT TGTGAGAAAATAGACAGACATGTCAGACATTTAGCTAAATGGTATCATAC TTGAAATAATAAATGAGGATCTCtttctaaaaacatatttatcaaaatat acaTCCTACAGTATCATGTTATACTAACCTTTCACACACCTTTTATAGTA TGTACACAGATTTACCGTGTTTTGAATGAGATGACGTCATATTAGACCTG GTTTCCACTGACCTTGATAATCCCCAAAACTAACAGAATTTGTTGGTGTT TCATAAGCTATGTACTTtttgtttgacatttttgtacgaatttcaaaata tgaaagTAAATTGTGTGTCAAAAAAAGATCATAGGATTTCCCTCaagttt attttcatttgtGTAAGTGGGTTTACAATGTACTTAACATTGACACATTC AGGACCTTCTTTGAAAGACCACACAATGTTTAAGACAAAATACATTTCAT AATACACGTTCTGCGTCCAGGAATACatgcttttttcataagaacatcca acatttttgaagccttcgaatgttcttaattttttgggtttcgagcctaa aaatgttcttaacatgttcttaacgcaatcttttatcatttttacccaat ttcctaagaaatcgagtgtttttgagtccataaaaccttaaagtattctt aacttgttcttaaaattttggccatcgaagccttgtgctcttttatagtt tgttcttataaaaaaagaaacgtgtatgCACTTTACGCAGATGGTACTTC TTATGGTCATCTCAGCTTCAAACTCCCCCTGTATATCACGTCTATCTAAG CTAATCTCCGAGAAAATTCGAATACTCCCTTCATgaccacagatttctgt aaagcccgaagggctacatgtcgtgctttaagctttttgcttccaagcaa aaaaaagtgaatatcgcaaaaaatattgctgctattgttttcgaaaaccc gcgaagcttctttttggtcaagcgctgaaatgctattgtaatgtcacgtg acctaggtaggatttcctacctaatctcggcacacttttcggcttttata aatctatatgCATGACATGTATTCACTCTAAAAGTCATGGCTTACATCCG CAACATCTCTTAATAGCAGACCTTGGTATGAGCAGAATAGATGATCTGTT ATTTAGCGTTATTAACCTAAGCTGGCACAAAACATTGCTTCAATATTCAT CTAGATCACGTGTCTAAAACTAGAATCTACAATCTTGGacaaatatttta tataaaGGGGATTTCCCTACAAGATCTTAAacccaaaaatgatttttaag tgctctgATTTACTTCTGGAATGTAGAGTTTCTTCAACTCTGAgtttaag accttaggatctcagaaggatacaaaatttcaaaattttcctaaTAAGGC TAgtaatatagcctagaagcaactgaacccctccaaaatcgaaatgtccA ATGAAATAagtgcaattctcgcccgagctctaagattctaaaaaaaaggt taaaatacacaaaattctcaatatatttcgaccataatTGTAGTAATGGT AACAGCCTTTAAATTGAATGAACGAAAATTGAAATAGGGAAACGAGGAGC TGTGCCTGTGATGCTTTCGGTGCCTAAGATGTCAGCGCCAATAACCAGGA GGTCCCGACTCAAATCTTTGCTTATTTTTAATGTTTCAGTCAGTTTCCGT TGGCTCTGAACCGCGTGAATACAATCGAGAGACTCTCTCTAAAACTCGTA GATTACTGGTTAATGCATGTAAAATATCTATCTAATATTCTACTCATGCT TAGGGTGAAAAAGGAGGTGAAGTCTTGGCCACTTTGACGGACGCCGAACT GAAAGAAATGGAAAACATGACAGACCGTTTGTTGACTGTTGCCCAGGTAA CAATCTTTCCCTTTATATGTTGATTGTTGAAATAATTTGTTATACTCTAC CCTTACTTTCTGCTATTTTCTGTATACAAAAGATAAATCAGCTTGTTAGG GCTACATAACTAGTATTAGATTTCTAAGCTCCACAAAATATTTTAGCTCC ATTTCATAAATACTCGCATCGCCCTGAAacaattttaaagctgataatcT CCCTTGTGAAATAGTTCATGAAATATTCTTTATCAACACTAGTAACTaac tgtaagttgtaaagcaagtaacttGGGAATAAAATCGCGTGAATTTCTTC GACTGCActgctataattttgcaacccgagAATCGGAAAATATGTCGACT TGACTTttgggaagggggggggggcttttaaCTGTCATCGTGTGAGATTA TTTTTACCACAAAATTTATAGCGTGCAAAAGACAAGAACGTTAGATTAAT GGTCGATGCAGAGCAAACATATTTCCAACCCGCCATTTCTCGTATCACCT TGGAAGCAATGAGATTTTTCAACAGAGATAAACCAATCATTTTCAATACG TACCAATGCTATTTGAAGGTAAGTCCTGGTTTAGACGGCAAACTTTTCAC CTTTCTAATTAACAAGTAAAGTGGGTAGAAAGTTGTCTAAGGTATTGCCA AAAATCCCTCCGTTTCCAAGGCAGATTTCTTATATTCTAACATATTGAAG GAAATTATACGAAATTTGTAACCAGTAACTATAACATTCGAAAGCCCtca aaaaacggtaaaaataattttaaatggaaATAGTTGATTTTCTAACCTAA GTTGGGAAAACATAACTTTCAATTTTactgtaaaattttatttttaaccg TAAAGTTTTGACCAGTCTTGACGTCCTTAAGCTTTCTCTAAAAATGAGTA TTTTTTGAAGCCTGAGCCTAAAATTTGgggtttcaaaatttattaattta ttaattCCCTAACTAGTAGTTATACTAAAGATGGGCTTGCTCAGAAACTC CCTTTGCATTAGTGGGgttttatatatatttatatCTTGACGTTCCCTAG AAGTTCTCAAGAGTAGATTAGTATACCTTTGAAAGGAGCTTTGAGGCAAG GATATACATTGATGATTCGATGAACCTTAATTACCTACTTTTAAGGATAC ACCTGCTCATTTGCGTATCGATATGGAACTTGCTCGACGAGAAGGCTTCA AGTTCGCATGTAAACTTGTCCGTGGCGCTTACATGGAACAAGAAAGAGCC CGCGCGGAGGCACATGGCTATGCAGATCCGATCCATGACAACAAGGAAAA CACTCATGCTTGCTACAACGATATGTTATTTATGATGCTTGAGGAAGTTC GCGACCGCGGCGCGAACGTTATGGCCGCTTCGCACAATGAAGCGTCCGTG CGACATGCTATCAAGACGATGCAAGAGTTCGGTATCAAGCGCACAGATGA TAACGTCTTTTTTGGACAACTTTTGGGTATGTGCGACGCCATTACTTACG CCCTTGGAGGGGCGGGATATTCTGCTTATAAATATGTCCCCTATGGCCCT GTTGAAGATGTAATTCCCTACTTATCGAGACGAGCTATGGAGAATAAAAG TGTTATGCTGGGTGTTATGAAAGAACGACAAATGTTGTGGAATGAGCTTG CCAGACGCGCTAGAAGCAGAGAGCTGGGCCACAATCCATGGGCTCACGTG ACCGCTTGAGACTTTTAAAGCCTTGCGGGGTTTTTTATTCTCAGTTTGTC TTAAAGTGGCTACTATAGGACTTATGGTAGACCTTAGTAAATGGTTGAGG AGGTAATAAGTTGAGAAGGGGTATATGTAAAATAAATGACATGgagtgat tttatttttattttataaaaaccagatgctcctagatttttttatttttc agtccGTCCTGGatgtcacacctcctcaacataggggtacagactatttt tGAAATAGCCCATTAATTACATAATCATCAATCTAAATCATCGTGAGTCT AaaacacagatatcttataaaaacactagatagagctactccgtCCCTAG CTGAAGTaaaataatccgccatctttgataagtAGATCAGTTCGGTGCCG GCAACTCGATCGATCAAGCCTATCTTTCGCCTAGCGCCATTAaggttttt ttgcttgatttacCAAATTGCCGGTGCCGAACTGTGACCtactgtgacct actttcagcaaagatggctcattattttcttcgcctgccgttgcttggga aatacagagtagctctatctagtgttttatataagatatctatggTCTAA ACGAACTTCATTGACAAGGAGAATTGACAGTTATTCTATtgataaatctg attttttatttaagttcatggaaaaatgtaaatatttaaaACGACTACCA GGTTCAGCTCAACCGATTGACAATctaaaaactaaataaataaacattCT ATTGTTCATTGTTAAGATGTTAAAGGGAAACTTAGATTTTGTGCTCTATG GCTTTTAGATACCTCCTATAACCTTGAGCAAAGCCtcgaaactttcttcc aaaatcgaaatattcatgTTACAATAgatcgaggaattcctaagagattt ctatcgaaatactcccgaaacaatcccacgatgcatcgcttttttagaaa aatcaaaaactctgataagatCTATTTCTTTGAGTTTGACTGGCAAGAAT ATTTTCACTTTACTATGATTTCGATTCTCGTCCCACGTAGGCTGCACGCA TTCCCCATAATATGTTTTGACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071982TCONS_00071982Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071982-proteinTCONS_00071982-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_66supercontigscaffold_66:78792..87964 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRODHproline dehydrogenase 1, mitochondrial isoform 1 precursor Homo Sapiens
LOC102724788PREDICTED: proline dehydrogenase 1, mitochondrial isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.39 16.14 7.17 6.61 4.39 3.61 5.68 5.51 8.21 6.87 5.83 7.53 6.31 7.56 2.33 2.4 18.93 10.47 16.99 21.87 47.83 54.21 24.82 33.63 9.99 11.92 93.54 101.1 15.5 18.19