XLOC_040728 (gene) - C. hemisphaerica

Overview
NameXLOC_040728
Unique NameXLOC_040728
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_427:48608..56183-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040728 ID=XLOC_040728|Name=XLOC_040728|organism=Clytia hemisphaerica|type=gene|length=7576bp|location=Sequence derived from alignment at scaffold_427:48608..56183- (Clytia hemisphaerica)
GACAAAGTAACGATTATTCTAATTTTCTTTTCTGACAGCAGCAGGACAGG CAGGCACGAGCAAACAATCAAAACGGCAAGAACCATTCCAAAGTTGCCAC TGGTATTACACTGAGACTGGTTTCTCTAATAAATACTAAAAAAGAGGTTG GTTTTTCTTGAAGTATACTTACTTCAAACATTTGGAAGTTTTACTAGCTG TATTGTATGAAGGTTGCAAAAAGCCATCCAGATTTTACATTATTATTAAC CAGATCCCCTATCCGGATCGTTAAGTAATCCATTGATCACATATCGATCC GTCATCGAGCCGTTCCGATGATCGATCCTATCGAGCGCAAGACGTCTGGT ATTAATAGGGAGGTCAAGGCTCACGCCTGCGGGTGAAGGCTTCTTCATAA AGACGAAAGACATGCAACATGTATCTATAGACCTTTTTTTAAAGAGGCAG CCATCTTGAATAATTATGTACTCAGCATAAAAACAATGATACAGCCATGC ATAATTTTTAAAATATGCATGATACAGTAATTATGCATGACTGTATCATT GTTTTTATCCTGGAGTACATAATTATTCAACATGGCTGCCTCTTTAAAAA AAGGTTTATTTTTCGGATCCGGTATGCTGGAATAGTGTCAGGACCTGCAG GTGCAGGCGACCTGGTAGGGTTGGGTATGGGTGTGGTTATGTATCAGATC GGCTAGGAATTGGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCGAAAC AAGCACTCTTTTGTGATTTTCTCTTAAACAAACTTTTATCTTTTCGAAAA CACAATTTTCTCCAATCATGTCAGGAAGTCCAATCATGAGGAAGTTTGAG GGTGATCTGTGGGGATGGCTCTTCTTAATCCTCAAACTGCACAAAATGGT CAGTCAGGCACATCCTGGCAAATGAACGGGGTATTTTTCACTTGCGACCA TTGGCAAATGAACGGGGTCGAAAACGAAAGTGACGTAATAGCGCCGAATA CCCAGTTTAATTGAACCGGGTTGGAAATATTTTGCTTCATTTCAAAGGAC TGCATAGATGAATTTTTTTTTCCATGGGTCAATTTTGTCTTTGAAGATTG AAGAAACTTTTAATGAAAAAATAAAGTTCCCAGTTTTCTTCCTTTTTTCC CTTTTTCAGTTTGAAGTTCATTTTTATTCATTTTCACGCTTTTAGCCTGA GACGTCCTATCTCATTTACACTGGGTGACGAATACCCCATGCAAATGCTC ACCCCGTTCATTTGCCAGGATGTGCCTGACTGATGGTAGAACTTAACTGA AAAAAATCCTGTTTGATTGTCAATGATGACAGTGCTGTTATTAATTTTGT TAGATCTGACAAATTGATGTTTGTGAGTACACTTTATAGTTTTGATTTCC ATTGAAGAATCATATTCTGGTTTTCATGTTACTAGATGCTGTTTTAAGGC TAGCCTGCCAAATTAGCTATATATTTGCAGATATTGCTGCTATTATGTTT TATTTCCATAATACAGAGCAGATAATTTCTGGCCCAAATTGGTGGAGTTT TTGATATGCGAACCTGAACTGAGTCAAAAGCTTTTAGATTGCAAATTCTC CCCAGTCTCTGACTTGTATGGCAGGAAATGCCTCCTTTTCTTTTGTCATA ATTAAAATTTGGGATGTTGCCTTCAATGACGTTCCAGGTGTAAATTATTT GATAACACTCTCTCCGTCTTTCAAGGCTTTACAATTTTACTGATTTTAGT TTTTATCAATAATTAAGATGTCTGAGGGATGGAATGCCATGTAAAAACGA TTTCTGAACTTCTTCCAGTTGCTGGACAAGACCACGTTTCCAGGGTGACC AGAGTTGAGAACATTAGTCCAAATGAGGGATGGCTATTGTTTTCCATAAA ATAGTTTCAATTTTCCTTGATTTGAATGTGCGATATATCCATGCACTTAT ATTTTTTACTTTTTTTAATTTGATCTTGGATATGCTTCTCATAATAAGTC AACTGAGTGTCTAGAGTGACTCCAAGGTCTTTAATTTTGTCCTTATTTTC GATTAACGTTGCTGTGTCAGAAAAATAGCGAGAACTTTGCTTCAGGGCGT CGTTTTTCCCGTAGGAAAGGTGCTCAAATTTAAGACCAGTCATCTATATT TTTTTTTAAATGTAGATTTATAATTAATTACACTTGGTAAAACCCCAAAG TTAAATTTACATGTATAAAAAGGTATAAATAGGTTTGGTAGGTAAAGGTT AGCTAATATTTAATAAAAATAAAAAACGAAATTGTAAATTTGGTTTTGAG GTAAGAAGGGGTTCAAGTTACACTTTTATGTTTTCTTTCAGGTTATTTGG AAATGTCATGAAGAAGAAGTACTGTAAGGAATGTTTTGCACCTGCTTCAG AGGTAGGCAATAAGAAGTACAAACACTTAATTGCAATGTTTTTTTCCAAC TTGGTAATGAGATATAGGCAAAATCATGACATGAGGGGAATCCAAATATA ATAGTGGTTTAGAGAAGCACAACGGTTTATTGAATAACTAATAAAGCATA CTCGAGTGACTTAGGGCAAGTCTCAAAAACCTAACAGTTTACCCTAAGTT TTCGCTACCAATAGCAGCCAGATTCAGAGATCCACTTAGGGCTCTNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNCGGTTGTTACGTAATTAAATATTAACCTAAAAATTAA TTATTAAAGAAATTGTAATCATGACGTCATAATTTGATCGAATTTGGTGA CGTCATGAATCGTATAATCACTATAATATAAAAGATACATGTCAAATCTA TCCCAAATTTGAACCAACGATGCATCTAACTGAAATGTAACTTTTTGAGA AAAAAAATTTTGGAAAAATTTAATGACGTCAGCAAAAAATAGCATTTTTC GATTTTTTTGCATTTTTTGCTGACGTCATCAAAATCTTCAAAAAATTTTT CATTGAAAAGTTCGGCACCATTAAGATGCGTCTTTGGTCCAAATTTGACA AAGATTTGACATGTACTTATAGAGTTAGAGCTAATTTACGATTTATGACG TCATAATTTGATGACGTCACAATTCACACTTTCTTTAATAATTAATTTTT AGGTTAATATTTAATTACGTAACACCGGGTCCTGAAACTTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTAAATGAAATCTTTTTTAATGATAACTTCATCTAATTGGTTT GTCTTTTACAACACAGCTGTTACCAAGGGAAATATAATTTAGCTTGTTCG TACTGGTTGAGGGCAAGTAATGTGTGCTGTAGCAATTCGTTATTCAATAG TCTTTTGTGTTGTCCTAAGGTCTATTCTGATACCCTTTTAATTTCACCAA ATGAGGTCTTCATAAAACAAGGAGAATTTTTTGAAAATATAATTTCACAC TAAAATTCTTCGTGTTAGTAACAGAAAGCCAAGTAGTTATTTTATCGATT CCATCTCCTTTGTATTTGTCACAAGCCGCACGCAAGTTTCCTCGGTAACA AAGGCAATCAAGACAAAACTTGATTCTTCAAACTCCTTGCAGAAATGTTT AACTGATATGATTATACATAGGTGCGACCAAAAGGTGTTCTCTTTCAAGA CCTTCAAGATATTGGAAGAGACAAGAAGTATTGAATGCTGTTGCCAGATA TTGCAGTTCAAATCATGAATTACCAAGGTCAACTGAGCTTGTGCCACCTG ACAAGAAGTTCATGCAAGATGTAGCATTTGATGAATTTTGTAAGAGGGTT GCTTCCTTTGTTTTTCGACTTTTTGATATTAGATTTAAAAGACCTAATAA GTTATCAATTAAATCTTTTTACGAAAACACAACCCTTCAAAAAAAACTTC TGTTGAAAATTTCAGCTGAAAGACCATACTATCACAAGCCATTACGTCAG ATAGATTACAACGTCATTTACACTAAGAATACCATTATCTCAGCATCAAG GGCGCTGAGTGATTACCTTCTAACTGTCGAGTAAGTTGATATCTGTTACA TTCAACTTTCTTACTCATGTCATGATTCTAAATGGAAATTAAATACTTAA GTTCAAGCTAAGAAATGTTATTTGAAAAAGCCTTCAAAGACCCTTGCCGA ATTAATGATGAAATTGACATTTTCTTAGGGATCTGGATGGGATGAGAAAG ACAGCAGTACGAACAGCCTATAATGACAGCGAACTTCCTCCTGATTTTTG CTACTTGAAAGTTGACGTGGAAAAAAGGTTTGTTGTTTTTATTCGTCATA CATTGTATTGAATTAATTTCATTCAGAGAATTGTTGGTGTATAGGACATG ATTGTGTAACTTCATTTGCATAGGGCGTTGGAGAGATGGGGAAGTATCGA AGCCTTGGAGCGAGAAAAAGAGAGAAGGAAAGAAGCCCTGGAAGAAGGTG AACGATATCGGAAAGGTAAAAAAAAGAACCAATTCATTTTATAGATTATA AATAGTCAAAGGAATTGCTCTAGATGGACTCTTGAAAATTAACTCTTCCG CCTTGAAACTTCCTATGTTTTTTACTTGATTTTCAAAAATGACCCTCTCT ACCTTTTGGTAATTCTTTTCGGGAGAGGACACTATGCTCTATACATTTTT ACTCTTCTCATTCTTTGCGTTCCTTTCCAGACTTGAGTGCTTTGATTGGA CATTTGAAGAAAACAGTGAAAGATCAAACGAAACAAGAAGACTTGAACCG GGTATGAACTGATACTGTCCACACTCCAGCTTTCGTTTCTATCAGTGCTG GGAATCGAAGACATTCTTTTCATTTTTTTCATTTTTTACAGATACTGGGA ACAAAAGAACAACGTGAAGGGATGCTGAAGGGATCTGCCAAAGTTGTTCT TTATGCCATTGCTTCGTAAGTTTTTATGTTTTGAATTCTTCAGATTCTTC CGAACAAGATGAATTAAAAGAATGCTCAGCTCCCACTTTACATGTACAAG CATTTCGGACAATAAACTTTGATAAATTACTTTTTTGATTCATTTTCCAG TAATTTCACAGTGTCCATCATGAAGTTCGGAGCGTATTTCTCGACGGGGT CAGCTGCTATGTTGTCTGAAGCAATTCACTCCATGGCTGACCTTGCAAAT CAGGTGAGTCCCCTTTTTTTATTGATTTTAATTCTATGAATCTTCATTAA AATTGTTCGTTCTCATGATATAGAAATGATGACAAAGCAGAAAACCTTCT CAAGTCTGTACTTGGTGGTGCAGGAATGGGAGAACGATGTTCCTTCTTTG TTTAAAAATGCTTTTAGCTAATGTTAGGACGTACGTTTGTAATGATTGTC TTTTAAAGACTAATTCATTTAAAGTCTATACTACAATCAAAGTCATGATA TTTGAGAAAAAAGGGAAATTCCCACGAAATCTTACAACCACAAACGATTT AGAAGCGCTCTAGATTAGGTCGGGAAGGAGTTTTAACTGGACCTTAGGAT CTGAGGATCCAAAAGTCCAAGATTGGTCCAATAGGGCTAAGAATATAGCC TGGAAGTCTATAAACCCCTCCCTAATTGAAATAGTCGAATCAATTTATCA ATTAGCCCAAAAGCGACTTTCTTGTCCGAACTTCTTTAAATTGCTAAAAA CGAGGAATTAACCAAAATTCTCAATATATTTTGACCCGAGATTGTAGTGC ATCAATCTTCTATACATCAATCCCACCCTTCCACTTAATCATCTTTATTT CGTATAATTCAGGTATTATTGGGCTTTGGAATTTGGCAATCGATCAAGCA ACCCTCACTAGATCACCCGTAAGTTGATTTTTCCTCTCATCGAACATCAG AGAAAATTGTTCTTTCTTCTTCAGGAAGTTTGATGACTTTCGTTCTTTTC TTTCTTTAGGTACGGATGGGAGCGTTCGCGTTACGTGTACGCCTTGATCA GTGGTTGTGGAATTTTCTTTTTGGGATGTGGTTTCTCTGTTTACCACGGG ATCGCACAAATCATCGAACCTGCTCCACTCGAACACCTCCACACTGTAAG AATTCATCTATGCCCATGCCATCATTTTCTAATTTATTTTTTGCTAAAAA AATATTTTTGTTTTTGTTTATTGACCAGGGATTTCAAACATTCATGCTTT TGATTTCGTTTTAGGCGTACGCTGTTTTGGCAGCTTCGTTCGTCGTTGAA GGAGGTAAGAATACGAGAAGAGAAGTTTAAAGGAGATCTAACGGCAAAAG TTTCTTTATCCTTATTTTTTGACAGAGTACAGGCCTAATTAAATAAAAAA CATTGCAAAAAGAATGAGTGCAAAATCTTTCATATTGATTGAATTATCAT TGTTTAATATATCTCATTATTTGAAAGTATGAGGGCTTCGTGACGTCAGC GCTGAACTTTCATTTCGATAGAGAAAATGTTTGTAGACAAAAATTATGGA AAGAAGATGTTTTATAGCAAAAAAATGCCTCTGATTCTGATGTGTCTAAC TCCGTTTCTTCATCAGTAGAATGGTTAAAAATTTCTGAGAAATCATTTTC TTCACTTGAAGATTCACTCGACGACATTTTGCTCTGAATTTAGAAGTCTA AATGAATGTGGTAAATGATTTTATCAAGAAATTTTTCTTTATAAAACTCA CTAAAAGTTTAGAGAAAAAGAGAGAAAATCTTGTTTAACAAACAAGTTGT TCAGCAATGACGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTTAAAGGGATATAATTTCCTATTGAGTTAAAATTTTT CAACATAATATAGCTCATTTTAATCCCCACAATATAAAGTTTCCATAATT TCCAAAAAAATGGAGCAAAATTTTTGCCGTTAGATCTCCTTTAACGATAC TTTGAGAATCGAAAGGTGAATTTTGTCAATCCTTTTTGTAACACTTTAAA AAATGTTGTCAGTTTGAAATTTTGTGATGTTTTCTTTTCAGCTACCATGG CCACCGCTTTAAAGCAAGTTCAACGGAGTGCAAACGAGGCTGGAGTGTCG ATACGAGAGTATGGTATGTCTCTACCTTTATTATCACAAGTGTGCAATGT GACCGGAAAACAACGAGACATAATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064949TCONS_00064949Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064949-proteinTCONS_00064949-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_427supercontigscaffold_427:48608..56183 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.8 31.41 32.3 35.14 51.98 41.18 47.75 49.89 57.34 53.79 61.27 61.47 57.91 63.93 37.23 43.22 45.28 51.56 40.59 38.27 43.26 43.54 46.18 45.22 61.15 54.98 41.8 39.45 44.3 52.71