TCONS_00064949-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064949-protein
Unique NameTCONS_00064949-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064949-protein ID=TCONS_00064949-protein|Name=TCONS_00064949-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
MFCTCFRGATKRCSLSRPSRYWKRQEVLNAVARYCSSNHELPRSTELVPP
DKKFMQDVAFDEFSERPYYHKPLRQIDYNVIYTKNTIISASRALSDYLLT
VEDLDGMRKTAVRTAYNDSELPPDFCYLKVDVEKRALERWGSIEALEREK
ERRKEALEEGERYRKDLSALIGHLKKTVKDQTKQEDLNRILGTKEQREGM
LKGSAKVVLYAIASNFTVSIMKFGAYFSTGSAAMLSEAIHSMADLANQVL
LGFGIWQSIKQPSLDHPYGWERSRYVYALISGCGIFFLGCGFSVYHGIAQ
IIEPAPLEHLHTAYAVLAASFVVEGATMATALKQVQRSANEAGVSIREYG
MSLPLLSQVCNVTGKQRDII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040728XLOC_040728Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064949TCONS_00064949Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002524Cation_efflux
IPR022656XPA_C
IPR009061DNA-bd_dom_put
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008324 cation transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..166
NoneNo IPR availableGENE3D1.20.1510.10coord: 204..356
e-value: 2.2E-25
score: 88.9
NoneNo IPR availableSUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 204..340
IPR002524Cation efflux proteinPFAMPF01545Cation_effluxcoord: 209..337
e-value: 4.9E-29
score: 101.4
IPR022656XPA C- terminalGENE3D3.90.530.10coord: 62..153
e-value: 7.8E-14
score: 51.3
IPR009061Putative DNA-binding domainSUPERFAMILY46955Putative DNA-binding domaincoord: 84..154

Blast
[Close]
BLAST of TCONS_00064949-protein vs. Swiss-Prot (Human)
Match: ZNT9 (Zinc transporter 9 OS=Homo sapiens GN=SLC30A9 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.204e-59
Identity = 116/284 (40.85%), Postives = 164/284 (57.75%), Query Frame = 0 
Query:   73 LRQIDYNVIYTKNTIISASRALSDYLLTVEDLDGMRKTAVRTAYNDSELPPDF-CYLKVDVEKRALERWGSIEALEREKERRKEALEEGERYRKDLSALIGHLKKTVKDQTKQEDLNRILGTKEQREG----MLKGSAKVVLYAIASNFTVSIMKFGAYFSTGSAAMLSEAIHSMADLANQVLLGFGIWQSIKQPSLDHPYGWERSRYVYALISGCGIFFLGCGFSVYHGIAQIIEPAPLEHLHTAYAVLAASFVVEGATMATALKQVQRSANEAGVSIREYGM 351
            L++ +Y   YT+N  I+  RA++++ L   DL+ +RK   R+ + D+E    F  YL+ DVE ++LE WGS EAL REK+ RKEA  E   YR+ L           ++Q    +    LG  + R        KG  KVV+ AI  N      KF A+  TGSA+M SEAIHS++D  NQ LL  GI +S++ P   HPYG+   RY+ +LISG GIF +G G S YHG+  ++ P P+E L  AY +LA S V EGAT+  A+ +++R+A   G+S  +Y M
Sbjct:  116 LKKREYGSKYTQNNFITGVRAINEFCLKSSDLEQLRKIRRRSPHEDTE---SFTVYLRSDVEAKSLEVWGSPEALAREKKLRKEAEIE---YRERL----------FRNQKILREYRDFLGNTKPRSRTASVFFKGPGKVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPSHPYGFSNMRYISSLISGVGIFMMGAGLSWYHGVMGLLHPQPIESLLWAYCILAGSLVSEGATLLVAVNELRRNARAKGMSFYKYVM 383
The following BLAST results are available for this feature:
BLAST of TCONS_00064949-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNT92.204e-5940.85Zinc transporter 9 OS=Homo sapiens GN=SLC30A9 PE=1... [more]
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