XLOC_038197 (gene) - C. hemisphaerica

Overview
NameXLOC_038197
Unique NameXLOC_038197
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_349:811467..816314+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038197 ID=XLOC_038197|Name=XLOC_038197|organism=Clytia hemisphaerica|type=gene|length=4848bp|location=Sequence derived from alignment at scaffold_349:811467..816314+ (Clytia hemisphaerica)
CTGGGTATTTCCCTTGGCAAGATGAGACGCTGATGGAAGGATGTTGCTTG AAATATGAAATGGAAGATGAGAGTGACCGCGCGACATTTGATGGAAAAGG AGATTCACATACAGgtaatttgaaacattttttctttgcaCGAGTGTGTC TTGAGTTTAccattagcctatttcatacaGGTAATCTGAAACATTGTTTT TTTGGTATGGGTGTGCATCGATGCAGGCTGCACGCCTCCcttctgatatg ttttgatgtagGGGATGATAGTCGTGTTAGAAATTCCCTatccgagagtt accccaatTTTTGGGTAACcggttttaattttcttaagaaggtttagaaa tccaatgattgtattaacctctagccattcaaatttttaattcagattta atgaaataataaagatctttcataaaaaactttctaatCATCTAATCAAG CAAATCCAAAAGATTTCCAAAACCTAAAAAACTAAGacgggggtaactct cggacgggaattttatacatgatgagaatcctctaaatcgcgttttttat aagaacatccaaaatctttgaagccttcggtTGTTCTTAAccattttaag ttttaagtctaaaaatgttcttaacatgttcttatagTTTTGTTCTTATA ACATAAAATGTATAGCTTTGGCGTCAGACCTGTTTATGAGAAAGCAGCAG AAATCTTGGAACTTGATCAATATCATCATTACGTTGACGCTTATGCAacc aaaaagttcatttttgatttttcttgaaaaatataatactgaatttgaat tttctcAACTTGCTCTCAACATTTTGGCTACCGAAGCCTTATTTTCTCAC ATAGTTTGTCCTTATATAAAATGTGATAGCGTGGATTTTTTATTCCTTCA ATCGATAAACCTATAAACAATATAATGACAAATCAAAAATTACCAGAATt ctacaaaaagaaattaaaaaaacccGTGCCAACCCATTGAACAGTtataa ttgttttattatcaaaCTTGGAATCAACAACACGCTTTGGCTTGCTTTCA AAgacttttcattttcgtttcgCTCTCTCGTTTACGTtggaattgacgtc aaaaggcATGAAGCCAATTACGTTGAcgacttttttgtttacaagttTCT TCGAAATTAGCattcaattatcattagaaatgtttttcaaataagAATAG AAAAAAGTCGTTAAAATGGTAATTCATGGTTAATTTTTAACGGTAGCATA CCTATTTATCCTTCGCACGCGTAACgtcatcccagctggcacaaaacgtt gtttcaacgttcatttaacgttaaatggacattgtgaacgttagataaac gttgaaacaacgttgtgtgccagttggaATGCGATACATTTACTTTTAAC CAATTAGATTTAATTTTTGGAGGGAAACACAAGCACCATGGTCTAACTTT CTAAAAAATCTTGTTTGCCAAAATTGCACATAGTCTTTTTAATGACCTAG CCCAAAGTGCAATGCTTTCACGAAGTTCTTTTAAAAGTTAAGTTGTGGTT GTGGAGTATTTTCTGCTTTTTTCGTAGTACAGTTTTTAATTTtcgacaaa tttttaaaatttaacattaatgattatttttcaagcttatttccaaaaat atataattttctcAGAACTTTGCACAATTTAAAGGAAAATCGATAATTGA ATCCTTGTTCAGTTCGACGATACAATCTTTAGGACATGTGGATtccaccc agctggcacacaacgctttttcgacgtttatctaacgttcacaacgttca tataacgttagacaaaggttgaaacaacgttgtgtgccagctggaacCAA ATTGCTCACAATCGGAAAGAAGGAAATTTTGGTGGAAATCTAAAAAGTTT AGAGCAAATAAATACgttaaaagttttgattttcttataaaaaacgatga AAAGCAATTAAAACATTCTCTTGTGTTCCGTGCCAGACAGGAACAGGGCG GGGCGTTCGAAACCACGAAGACGCCACATGGTCAATCAAAAAGAGTAATT TGTTACTATTTTATGAGAGAgatttcattttctaaaaattttcttaaatg ttCTTGTCTTCGgcatttttggtgtaatttcaTGAGGAATTGCATGTTTT AGAGCTTTTGAATTCCATAAAACCGTTGGCTTGCGCTGAAGACTTATATT CTTATATGGAAAAGAGACAATCGTTACACAACTTTGCTTCGACTAATGAT AGCCTTTGTATGCTCCGCCCTACCTCGTAAAGATAGTTTCGAAGCTAAAC TGGTCTCAACTTTTTGTTTACAGACTATTTCTATGGTgatgaaacaaaca aaaaacttgaaaaaagtaTGTTTGGGAAAAGTCATTGAGCTTAGCCAAAG GCCAAAGACGAATCTTTTAACCTCTTTCTCtctcaaaaaaaagtgaaagc cTTGAAATTTGCGTTTTATTTTGGATGGCGGATTGACTTTCATTGATTTT TGgccttaaattttttaattttctgccGGAATATGTAACTTTCAATCTTG TTATCTGGTACTCgaagtagaaattttcttccgacacgctaaagctctga aggtcgggaaaattataacatctggaacctttggaTTACGGAATTTCTCC TGACCGCGTtcgtaaaatttagaaagaGTCTGGGGACGGTAAAAAGTTAC TAGTGCCCCGAACTAAGAGTACacatgtaaaaaaaatttcccgtgCGATT TCTACATAGTGCTCCGAactgaaaaatgtaaataaagtgtaaggacagct agacacgactgtgatgcggtacatcaaacgatgactactataggtctccg atgtgatattggcccgctccttcagagctttagcgtgggcggccgccaat acaccatcggaatatcagataatcaATCTTGTATCTGGATGAGAACCACG CGGGCCGCGCAACCAATGTAGAAAATAAAAGGTTCCAAATCCTACATAGC AGTTTCGTCTTTAGCATTTCGCGATACCCTATTGGGAAAACTCGAATACT TTTCAATTCATTAACTGTAAtataatacagggtgtcccgaaaaaaagtat cgagctCGAACacgattctgagtagaaggttatcgcgtgtgtttaacaaa atgtaagaaatatataccaacacaataattgtttttacaacaatcatttt gattaaaaataattaactctctttacaattttcatgacgttaaagttatt gagaattgttttttgtaaaacttattcataaaagatgtctcatgacaatt aatatgacacagagagaaactttgataaacattgcaaatttagtgaaaca cacacaagaactttctttctatacaccttttcgaccaatgaagtataagc ccgaagggctagaagtcaatctccttggtaggatttgaagccaacaaatc ctaccaaagttgcgcggccttgagcggctcccCGCGTTTTTACACAAagg acagattgaaactaaaatttaccgcttaattttgaaaaaaNNNNNNNNNN NNNNNNNNNNNNNgttgcgcggccttgagcggctcgcctggtttttacac aaatgacagattgaaactaaaatttaccgctaaatttcgaaaaaaatatc aatcgtaaacaatagaattgctagattcaatctgtcttgcctgagaaagg ttagagattgaactctagcccttcgggctttaaactcaatgttttCGACC GTAACCGCCAATTGCcgcacgggcatttttttgtccgctttatcccacta aaactgtcccagtccttttttcgcacctatagacaatagaaaaatgtgtc aaaaaaggattggaccGAGTTTAGTAGGATAAAAGTGGCGCGCACCTGAC cgtgcgactacggtcgaaaaggtgtatagaagtggtacgactcaacactt tttttcgggacaccctgaaCACATGAATTAAACAAACTAAAGACACCCCT GAACTCCTCGaaaattaaaagtttcaaaagacACTCTCTTAGCCGCCTCA ATTTATAAAACTCTCGACTTAGAGGGGATGAGGATTTAGCacaacatttg ttttgaaattaatcaCAGTATAGGCAAACATCTTTCTACTAGACAATCTT TACCGATCATGGAAATGTTCATGGAAACTCTTACATAGTATACCGATTgt atttccaccattatggaaacatACGCTCGAATCTGTAGAAGCGATTCCTT ACGTAAAtcgcaaaaaaatatatatatataaatgcACATGCAACAATATT TCCATGTGTTTAATAGGGAAAATATTTACCGGTCACGGAAATGTAACTgt cttacaaagattgtttctAAATACGGAAGCCATAATTGATTTCTCCACAT GAAATTACATAGACAAACCACATTTACATAATCCATTCTAAAATCAACTT TCTCTTTTCCCTTCTCAGGATCAGACAGCGGTAGAACCTCAACATCGTCA CCTTCTGAGATTCAAATCCTGACACCCTTCCATTCAGGAATGTCCCCTCC AACAATGTTGGTATCATCGTGCTGTGATAAAGACCATGGGGACATTGGTT CCCTCTCACCTGCATCTAGCTGCCACCATGAGGTATCAAGCCCGTTCTTC TCTCGGTCTAGCTCCAGTCAGGATGGATTAGGCCCGATCTCACCTGAATC TAACCATCACAGAGATTTACCGAAATCCACCCTATCCGCACATAGCTACA ACCATATGGTAGCAGGTTCCCTCTCGCCTGCTTCGAGCTACCACCACGAG GAAGAAATGATACCATCCCCTTCCGGGCAACATCAACAAAAAAGCAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060805TCONS_00060805Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060805-proteinTCONS_00060805-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:811467..816314 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0.15 0 0 0 0 0.08 4.78 3.38 1.02 0.4 3.24 2.75 1.22 0.44 0 0 0 0 0.13 0.24 0 0 0 0