XLOC_037057 (gene) - C. hemisphaerica

Overview
NameXLOC_037057
Unique NameXLOC_037057
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:84327..91807+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037057 ID=XLOC_037057|Name=XLOC_037057|organism=Clytia hemisphaerica|type=gene|length=7481bp|location=Sequence derived from alignment at scaffold_314:84327..91807+ (Clytia hemisphaerica)
aaaatatgtaaatctATAATGAGAATATGATTTGATAATGATTTCTTGGA TAGTTTGATTGTAGAGTTTCTTGAATGATTTGACTTGCTGGTAAGTGTTT ATTTCCTTTATTTCTGATGtcttttttcttcatatttctTCATAACTCta ttatttctattttatttttcatcgaTTGAACACCTGTGATGTATTAATTG GACTGTAGTGAGCTAGTCTTATTATAAATAGAGCTCACTTGCTGCTGTTC AAGTTGACTCGAGATTTGATACCCTAAAAATTCAAACTCTCTcttgaaga gaaaaatattgcCTTAACCCTGGTTAATTATCCTTGGCTATGAGATATGT CTGTATTTACAGATCAGTTGTCGATTGTGACAATGAACAAcacttaaaat gaaaattctttaaCAGTGCATTAAGCCTCAAACTCAGTTTTGGCATCTAG GCTTTAACCTTAGACTTGCATATCAGTTCAAAGACACAGCTATTAGGCTC TAATGGCTTTTTTAACTGAAGTTTTTGAAATGTGATCGTTTTGAGGAGAA TGGGGCGAGCAGAGGGCTGAATAAAAATTGGAAGTAGTTACAAAGAGATG GAAAGTATAGACCTTTCTGCACAAGATTACAGTTGAGAAAATATTGCAAG CAGAAAAGGATAAATTCTTTAATTCTAGAATAAAAAGATTCTTATTAGTT ACAACAGAATAACAGCATAATGAAAACTTAATGAAAATAATCTTCCTGAA AAGATAATTAATTCACCCAAGAAAGATTTATTAAAGAGTTTTAATTCACC CAAGAAAGAGTTTAACAATCCTTTTACATATAAAATTTGCATggaatgat gatgatgatgatgatgattatttgatgaaattcatttttgacATCTAAAT GTCAACCTCATTAAAAGCTTTTATAAACTGTTCGCTATGTAAACAAAACT CCATGTTTTCTCTATGTTTGACTGTAAAAAAATTCACCAATGATGAACTT TTTAACGAACTAACTACATACATGTGTATGTAACTAGTTTTATCATGATT TTTGAGATTCGAGAACTTGAGTTTTGACTAAATTTACTTGGTCGAATTTA ACCATTGATTTGTAACCTTGTGGagaaaatatcgattttatttgttacaa acaaaacaaaatataattctcctgttcttatttttcactCTAGATTGAAT CCTTGTTTCCAAGAGAAGTATGGTTTAGCTTCATTAAAAATGCCACAAGT ATCAAGTAAAGTGAATTCCGCCCGACACAACAAACCAGGGCGTAAAGCAG GGGGCGGACGCAGTTACCACAGACAACCAGGAGACCCAGAAGCACAACTC ATCACCAGAAATGATGATAAAGATCACGATATAGGTTTACCAAGACTTGT GGCTCGCATTTGGGGCTTAGTTTCAGGaatttgtaagtatttttgcaGTG CACTCTCATCTAGGCCTTTTAAAAACACAGTttctttgtaaaaaaacttC TTATAAGATTCacaaggctcagatttgcaagatttttttatgaatcatGC TATGGAATGTTGTTCAACCTTTTTCTTcagttaaaatcttttgtttttca tttcattttatctATAAAGTAAGTCTCACTtgaccattttgaaatttgga gttattagtttttgtttccttgattCTCTTCTTCGTACGTTCAAGACAAT ACTTTAAGACAGATATTTCATTGCCCTTTTTTAAAATATAAGAAtcatta agaacattttaaggctcacttcgatttatgtaattcttataaaagaaaaa ctggTGTACTTTCTTGAAGCTAAACACTTCAAATGAGCAGATACATCAGG GAGCCTTTTTTATTGCTCTAACGTTTCAAAAGCAACCAAATCTCAACAGT CATCTGGAAAGCTTGGATGctatttttaggcaaaatatatatAGATAACT CAGAGAAATGGAAAGGGATAGAAAAAgcgcttcttgaaaacaatggaaac acGGCTCATCATATACCAGGTCCTTTGCACTTAAGGGAGTTTGTTTGGAg taatggatttcttttgttgtcgctttGAAAACTTTGTATAATTAGCGTGG TGtgacgaaattcttttgtttcaggtcAAATTATGCAGCAACTttagggg cttatattttggggacATACCATATAAAAAGtacctatattttcttgctc agaagGTTCTAGCGATTCTAATGATATAACGGCATCACGACTGCATCATT AGATAAGAAGCTAAAGTtcgagaaaaaaagaaagtaaatctgtttatgaa tttctttcaaatattctcGAAGTAACTTGATATCATCgtgatgagaattt ttcagactaTAAGTTAGTGTAAAATTTGTTCCTGTATACTGGAAGTTTAA GAGTACTGTAAtggatcaaaaacaaaaaatatcaatctaCTTTTATTAAC ATAGCCATATATAGAAACCAACCCTCTTCgcatgacgagccgttttttcT GAACCCTTTCTAATTACCCCCGGGGGGGGTGCACTCATATAATCTGGCCT ACGTcgtgtgccgcgcttaagggtggggtttttcagtatcccaaaatgca ctgtaagggtgtgtttctgtgagattgcactgcaagggtcgaattttaNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNGAAAgctttttacttctcgtttgtttgaaaaagtttctttt gtctgataattacagctgacaagaataattttctcagtttttctttgaaa cagaaaattttccaaacttcTTCTtccacgcagatttacagctgagaaat atagtgcactataaatcacactgaaagggtaccttttcagccatattgaa ctgcactgtaagggtaccattttgaaaagcagattttgcgcggcacatac cgtcgtctCGAAATCGAATgcctgccccccccccgggtaattACCTaatt aaagctaaaacaaaggaGTTTTCAATAGAAACGATCAGAACACTGGGTAA TCAGAGAAGCGCTTTTTCTATTCCTTTTCATTTCTCTGGATAACTGGATG ATTGTGCGCTTGAAGATGTAAacaatgagatttttttcttttacagcgTA TGTGAGTAATGGAGGATATTTATTGGTCGAATCATCAGCCGGTAACGAAA AATGTCAGGCTGCTGGTGGCTATATGATGTAAGTGAGTTGCGTTTGAACA ACTGACCTTTATATGCCCTGGACACAGTTTCTTGATCCCGACAATAAAAA TCTTTCATCGGAGTTATTTCAAAGTGATACCCTAATTGTAGCACTACCCT GATTGTAGCACTACTCAATGTTGGTAAAATCTCCATTGAATTACAAATTG ACCCATATTGGGTAATGTTTAGGGTGCCACTTTTCTAAGAACTCTGATCG CAGATGGCGGATAGCTTGATAGCTTGGTCCAGTGTATATAAAGTTCAGTG GTGTGACGCAGCTTTGAGCCATGGTGGAATGACTAAAATTGTTTCCGACT GGCTTCCCGACTGAATTTCCCTTGACTTTTCATTTCAcgatcaaaacatt gaaattaaaAAGTTGAAAGGCTTTATACTGTGCTGGCTTGAAACTAGACA TCATTCTCCTAAAATGGTCTCCTATTCTCTACGAAACCAGTAAACCCGGA AAGGCTGCTTTATTGGAATGCTTACTTTTGATAAGACTCGAATAATTTCT CTCCAAAACTGTCAATTAAAACTTCTGACCctataaattatttttcatga aaaaatattttgaaattgtaaGAAGTTGAAGGAAATCTCCCTCacgattt catttttcttcttgttttagATTCGCAGGGTTAGTGATGATCATCATGGA ATGTGGTTGTTGTATTATGCAAACCAAGAATAATTGTTGTGATGACTTCG AAAAGAAATTCCCCTTCTGGGCCAGAGGACTAATTTATCTTTTGTAAGTA CTAATTATCGcattacacccctgtatcagttaACCCGCGGCAATTTTTCA ACCAGTTAGAACGACAATCTAAGTCCTAGGCTGGGCGTggttttataaaa aagagtttTCAAATTCGAAAATCCGAGTTTTTCATGATAGGGTTGAAAAT CAATCTCTACTTTCTCAAcgtgaaaatatattttcttaggTAGAGTGCTC TTTTAATACGTGTATTTTCAGTGGGAGCCTATTACGCGTACCTATGGACC AAGAGTAAAACGTAAAAGCTTGGGCATGTCGATTGTGCAGACTCATTCTA TAATCTTCTCTTTCAGATCAACAATACCAGCTTTAGCATTATGCTTTGGT ACCAAAACTTTGATCACTTCAATCATTGTTATAACACTAGCCTTGATTTA TATCTTCTTAACGTGTTTAGTTAGGtaagttttctttgttttgtttttta attatttttaattttaaaaaaatctagtGTTAGGTCTGCATCCATCGCTT TTGAAGGACAATATATCTTTAGAAATAAAACCTCattagaaagaaatttt ttcaaaaaaatcaaaaatgaagagGATTTCAACTAGCTATTTAGATTTTT GATATCCCTCTAGCACTACAAAAAGGGTCCCATTTTGCATATTGTGCTGA ATTAACAAAAGCtcagtgtttttcttttcctctttctgaccgaCCTtact ccacattcgtgtcaattcaatgggatgaatctttaaaattaaaattgacg agtataAACAAAGatcactcttattaaaaaaaaacaacgcctttaatata ttttttgaataatttttttaaaactcatGAATTTATTcgctcaaaaatat ttttccgacAACCCAAGGTTTTGCCTTCAAGATGCAATATGTATCAAAAT GAATcaagttaaaaatttttcaagagCAAACTTTACCTTGAAGGACTGAC TAAATGTCTCCATACCTCGGGGTTCAAGGAAAAAATAAGGATCAACATTT TACCTTatgggaatttattttggcgagaacttattttggcgattgatgaa tttttttaattttggcgggacctaaatttggcgaatgacagcgtaaatct gttcttttttgcctttcattcatttttcactttttttgtgaaCTCAAGAA GCTATTTAGACAAGacaccaaaaaatttaattttggcgagtgagcaaaat atttaattttggcgggaactaattttggcgagtttTGTCTTAATTCGCCG AGTTTTCCAAAACTAGTTCctaccaaaataagttcccttcaGGTAGTTGG AAGTTGGATATTCTCAAGAAAGGTCCGTCAAAAACTCGTTACTGCTCCGT TAATTCATAAATGACAATTCTTTTCACAGGAGTAAGCGTTACGAACGTTT ACGTGGAGCAGCACGTGCTCGTTACGAGGGAGCTAAAAAAGACAGTAGTT TGACTTACAGTGCTATGAGTGGTGTAAATGCTACAGTTAATTATATGAAA ATGAACTCTCCCAAACATGGGAAACATGGTAGAGGACGGTCTGGAGGTGG TGGTCGATCCTCAGGTGGAAGGTCAAAAAAACCTAGGACTCATTCAGCAC ACACGTGAGCACTTCACACTTGCTGtagtttttaattcaaatttttctga tttcttattttttttacatttcgaATTGTGAATAGTAACGCATGACTAAT TATTTCTCCTTATTAACATAATTATTTACTTATACACCTCGTACAAACCC TAGAAGGATTTTTAGAACCTTTATCTGCATTATCTGGAGTTCTTTGTAGT ATTGTTAGGCGAAGATGTGACTCAGGCATGATGGAAATGGTGGGAATGAA CAAGCCTCAATGCTATACTTTGAAATAGGAAACCTTCTCGATACCGCATT GGCAGAGAATTCTGAAAAACCTCGAAACATAACATGACACTGTTTTATAT CTAATTTATACATTTGTATTTTTATGTTAGTTAGTTTTTAATATTCATTG GTAAACTTATAGATATTTTAAAGTATCGATAAACTTGTAGGAAACAAACT GATCTTTGTCTTTATATGTTTAAGAATTCACCTAAATTCacaatcagcgc cgaaatatattgggaaatttgggtattttaacgttttctaGAAANCCCTA AATTCACCGAGctacaatcagcgccgaaatatattggcaattttaggtat tttaacgttttctaGAATTTAAAGCTTGGCGAGAATTAtaatttcagtac ttccactatGTTCCAGTGGATTTCTCGATTTGGGAGGGgctaagtggctt ccaggctatgttCTCAGccatattggaacatttttgagcttttagatcct gaggtCACATCCTTTTTATAAAACTGTACTTTCTAACCGTACTTttaagc acttaaaaatcacttgcggttttaagagccagtttttctaAGAATGGGGC AATTTGGGGCAGGTTaggtccaatagtttgaaacttagattttcattttt ggatatgttattAAGTataatgaactgagtaaaatcccaaaattttttgg tctgaaaatccataatggcggatttatggcaaaatctaagtttcaaacta ttggacctaccccgctcttagaaaaactggctcttaaagTTTTGAGGTAA TTCgctagactggcacgccagtcgcgttatcacgcgggaaaagtgagcgt aggaagaaattttgtcggcggcaagggctgaaatcagcagcctctcacca acttttgctcgtttttctacgcagctcctattctagcaaacgcccgccgc ctttatgttcccgccctctgacatgaataattaacagactagtttgccaG TCTAgtaattccccttttgtgccaaatttttcggcgccgattgtagaTCC TTTTTTAACCGATTGATGGGAGCTCTGAACCTTCAAAAGAGACGAACTGA AATTTCAATTACAACTATGTACAATTGAATAAGATTAAAATTATTTGATA AATATTAGATCAAAAATGcttaaattcaaaaacaaatctATTCCTAGCAC TGGAAATTATCAGAATTTATTCGTAATAAAGTGCATATAATACAGCTTGT GCTTGCAATGTGGTATTAGTGAAAGTAGCATCCACCCAATTATCACGATT GGCGTCCCATAAGAAACGGCTTGCTTGTTTAACCCCTTGTCCTACATTTT GTGAACACGTGACAGTAACTACATACTTATATCGTTCCATTCTCAACTGC TTGACAGCGTCCTTGATGGCTGTACTTGCTTTCTTACACAATAGTCCACA CTCGTAAGGGTCATATGCTTGACTACCAAATATATCTTCCAGGATCTGCT CAATCATGGGTTTAATATTGCTCACTTCACATTTTCTATCAGGTTCTATT TTGAAAGTGTTTTCGTAGACCATTCTTTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058817TCONS_00058817Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058817-proteinTCONS_00058817-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:84327..91807 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.11 12.74 8.9 8 56.77 41.4 23.07 23.75 20.37 19.18 11.41 12.2 7.63 7.04 8.72 8.98 6.68 6.03 9.61 13.71 3.45 4.54 13.14 11.72 5.01 6.03 6.62 6.61 10.89 12.18