TCONS_00058817-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058817-protein
Unique NameTCONS_00058817-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058817-protein ID=TCONS_00058817-protein|Name=TCONS_00058817-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MPQVSSKVNSARHNKPGRKAGGGRSYHRQPGDPEAQLITRNDDKDHDIGL
PRLVARIWGLVSGISYVSNGGYLLVESSAGNEKCQAAGGYMIFAGLVMII
MECGCCIMQTKNNCCDDFEKKFPFWARGLIYLLSTIPALALCFGTKTLIT
SIIVITLALIYIFLTCLVRSKRYERLRGAARARYEGAKKDSSLTYSAMSG
VNATVNYMKMNSPKHGKHGRGRSGGGGRSSGGRSKKPRTHSAHT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037057XLOC_037057Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058817TCONS_00058817Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019365TVP18/Ca-channel_flower
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019365TVP18/Calcium channel flowerPFAMPF10233Cg6151-Pcoord: 83..164
e-value: 1.2E-6
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..244

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058817-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top