XLOC_033776 (gene) - C. hemisphaerica

Overview
NameXLOC_033776
Unique NameXLOC_033776
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_232:89988..96555+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033776 ID=XLOC_033776|Name=XLOC_033776|organism=Clytia hemisphaerica|type=gene|length=6568bp|location=Sequence derived from alignment at scaffold_232:89988..96555+ (Clytia hemisphaerica)
AGGAAAGACAAGAAAAACGAGAAAAGGAGATAGATGACCTTCGAAACCAA TTGAATGAATTAACTGAACGTTTTGAGAACACTCAAATTACTATCAAACA ATTGACAGCTCAAAAACAACAAGTAAGTAGAGACTTAAAAATATGTGATG TCACATCCCTTAAACTTAAATCCTCCTAGGGGAAAAGGGAATTTCTAGTT AATGAGTACCATAAAAACTCAAATACTTCAAAACTTCGTAGgccttatta tttttttcggtTTTCTTGAATCGCATTCTTTCCTTTTAGCAACGAGTTTA TTTACAACGACATTAACTTGTATTCAAAAATTAATTCTGGGTTTTGCACA ATAGAAACATAACATTTGTAAGTGACACAAACATCTTCATTCTTTGAGAT ATTGTTCAGTTTATTCGGGGTTTATTCCTGAAAGATAATTAATTCTCGGA TTCTTTAATTTAGATGGACGAGCAATCAGTGAAAATGGAAACTTCAAACA AAGATGCTGAAAATGCATACCGTGTGAAAAAGAAAACGTTCGATTTACTG CCCGAATCTGAAGAAAACCTCAACAAACTGATGGTAATAATATATCATAT GTACGGTCGGTACAGATTTCTCTTCGATCACTGCAAAAGTTTACCATTAA ATACCTTAGATTGGCCAATATGGTCTTAGCTGTAAGTTGGTGGGAGCTGA GCATAATTGCATATTGTTTTCGCTAAATAGACTTAGGTAGCGAATACTTT TTGTTGGTTTtattattcttaatattttaaaaactgTGCTTATCAGGGTC TCGTTTTATATGCACAGCCTATCAGTGTAAATTAGGTTTAAACTCAGAAA ATCATTTCCATGTTGATGTAGTTATCATTTCTGTTTCCTTTTTCTTCTTT AGCAACTTGTTGAGAACAGTTCCCAGAAGTTGGTCACTCTAAACGAGCAA TGGGAAAAACATCGTGCTCCACTTATTCAGAAATATCGAGAACTGAAGGA ACAAAGCAAAAATCGTCAAGTATAAAGAATTTAATTTCCATCATACTAGA AGATATTAATAGATGGGCTTTTCCTATCTTTTTGCTAAAAAACGAAGTTA TTATTGAGATTGAAGTTTAATATCTAAGATTACTTGTTACTTTTATCGTA ACTGATCTTGGACCATATTTCCAGATATATTTAGTTTTTTAATGACCTAG TTAAAAAGTCTGAATCAACAATACAGATTTCAGTTACGTGTAGCGCCGAT TtcattttatgactttattcTTTTCACTTCAGTCCGAAGTAGAAACACGA ATCGAACAAATTCGCGTTCTTCGTGAAAAGATGAAATCAGTGACTGACGA TACTAGAGACAAAGAAGAAATGCTGAAGCAattggtaaaaaaacttttca taaagttttaaaaTCCCCTTGCCCTGGCCTTGTCTCTCTCTCTGATATTG CGATTATTATTTTGACACTTTTGTCTCTAGTCTAACATGTTTGatttaag aaaaagtaagtaaTGGTAAGGAAAACTTAAGGGCATTattataccgggtg tgccacaaaataATCTGAACTTTTGAACTTTGACTTCTAAAAGTGATGGA TTGATTCCCTCCTTTTAACCAAGTAGCTACGAGATAACCAAAACTACCTT aaagttaaaggaagaaaatttggcgggaatttaataatttggcggatggt tgaaaaagttttttctcgaggagatttaatttggtgaatggacgaaaaaa ctaaatttggcgagaatttaatttggcgcttgctgaaaaatttatcctta aaatggcgtaaaaaagcaaaaaaaatgcaaaaacaccttaaaagagagat catgtttaaaaaaagtttaacttggcgggaatttaatttggcgaatggcg gaaagaagaaattttggcgggaacttaattcgGCGGATTTTGGCCAAgcc cgccaaatccgccaaattttctttccgccaaaatttcttcctttaagata TATGGATAGGACTTGCTTTTTTACCTCTTTTGGACACATGTGTATACATG CGTTTTATCATTACAATTTTTAGGTCAGCGAATATGAGAGTTTATCGAAA GATGTCAATCGTTCATCATACACCAAACGTATACTGGATATCGTTGCAAG CATCAAAAAACAAAGAGAACAGATTGCCAAGGTTTGACATTTTTACTtgc tgaaagaaaagaaagaagtaTTATTTTGGTACAATGCCATTTTAGAACAA CTCTTACTTTTATGAAAGATATCGATTTTTATAAAGCACTTTGAGGAGTG TGACGCAGCAGAAACACCATTTCACAGAAGACATCCAAAGTTTTTATGGT GTACACTTTATCTTTAGATTCTGCTTGATACAAAGACTTTACAAAAAGAC ATCAACTTCTTGACTGGCAAACTAGATCGAACTTTTACCGTTACGGATGA GCTCATCTTCAAGGTATGGTTTACTCCCCCCTCTTCCCAGTTCTCTTGCA AAAGCCATCACACTAAGACGATTCAATACTACTGATCTACATATATTCTT TGCAATGTGCTGCCTTTAAAAGACAGCGCTCCTAACGCCTTCAGTATTTG TAATGGTTGAAATCCTAATATAAATCTAGCAATCATCAACTCTTCTCTGC TCCACTGTGAAATAACATTTGAATGCTACACAATAAAGAGATAAAACACG AGTGAACGGTCAAAATCTTGGAAACTCAAAGACTCGAAGGAataagaaat caaacttttcgaatttagCATTCAGTCGTTTTGATAaacattaaaaatgt tttttttggacctaccccagaggtcctttaaattaactgatgttcgttcg tccgttcgtctgttcgtctgttaccaccttttctcaggattggatTTAGA ACATTGCCTGTAGTACGCCCGTAGCCTAACGctcacgccataatttgcgc cccaaaaattttctcgacacacacacacacacacgcACATAGAAAGGCTA TTGTAATACTTttgctatgcgaaattaataataatCATCTTCTCTGTTTT CCATTTTAGGATGCTAAAAAGAACGAATTCAGTCGTAAAGCTTACAAACT ATTGGCCAATCTTCACGAGgtttaaaaacttttgtttcAAGATAATACTG ATGAATTAATAGGCTtcatttctgaaaatatttgaaaccccCTATCTAAC AGGCAAAGTTATTTTGGTGTTCACCAATTGATGGTGATGAAGTTTTGTGT CAGCTTGATGTTTAAACGTCCTTCTATTACAGATATTATCTCATATCATG AATGTAACGAGAAGCTTTCTCATCTTTTCTGGAAGCTCTCTTGTATAATT TTGCAAAATCATAACGAGACATAATTACAGTTTACTCTCGCTAATTCTAA CTCAAATGGGGAATGTTATTTGTTCGAaatacagagagattcgaattatg gagagtttttaagagggtttctcttTTACGGgaactgagaattagttcga attataaatagaaagattccaaaaatataagtTTGAATTATAGTAGCAGT GGGCTATagagactttttttttcaaaattaagtttgcataatttttttgg tcTGTTGGGACCCAAATAACACAAATCtgagatattttttgattttttca attttgacggtTCTCCGGCCTTTTTTATGCCCGAAATGGGCCAATTTCGG GCATTTTTGCCTGGATAAAAAACCTAGAACCTGTTCTGTTGGTGCTACCA CCCTAccaaattaggcttaaaatattccttggaaaaaactaggattagaa tgtaacaattatatacctctaccATATACATAGACTTCAAATGATTAGGT ATTTAggccaaaattgaccgaaaCCACTAAAATCTGCTCTGTTGCTGCTA CAAgcctcaaattaggcttaaaatattccttggaaaaaagtaggattgga atgtaacaattatatacctctagcataaatataaaatttaaaaattcagg tatttaggccaaaattgaccgaaaaCAGGGGAAAACAGGGTTTGCTTGGG AATAAAAGCTAAAATCTTTTCTGATGGTGCTATAAACCTCAacttaggct taaaatgttctttggaaaaaagtaggatgagaatgtaacaattatatacc tctaccatatgtatataaaattcaaagaattaGGTATTTAGGCTAAAACT GACCGAAATCGGGGGAAAAcgaggttttgcctggaaataaaacctaaaat ctgttctgttggtgctacaaacctcaaattaggcttaaaatgttctttgg aaGAAAGTAGGATTGGAAAGTTACAATTATATCACTTGATCacctgaaaa aaattgtaaaaaaagggAATTTGTATCATAGGGCAAAAATTGCTAGTCAC AGGGGTAGCTTCTTCTTAGTCTAGGTGAAAGATAGCTTTAAAAAGTACAC AAgtctttaatttttcaagtctGACTTTTTGAAGCTATTGTATTGcatat atataaaaaagaagTTATTCCATTGCTAAGACTGTAAGATGTTCCAAATT GCAAATGATTCTTGACTGAATGAATTGATTGCAAGGCTTTTGACACAACA GTCTCTAAAACGGAACAGACAAAAccttttaaagttttctttgttGCATT GTAAGATTTTCAAgacatttcattgcttttattCATAAAGaatacattac attacattataATTTTAGTTAATTTTTTGACGTTGACAGTTCACAGTTTA TGTTGATTCTATTGTATACACATCTGAGACGAATCTTCATTTTGTTGATT TAGTAGTGAAGTCTTACAGAAATTGATATTgatagtttgttttgattttc atttcagatagaaaaatacaaagatttaaaagaaataacaaTATGAGACC AACAAAAGGATTGTACTTTTTAAAGCTATCTTTCACCTAGATAAGAAGAA GCTACCCCTGTGAATAGCAACTTTTGCCCTATGATAGGATACAAATTCcc ctttttcacaattttttcagGTGATCAAGTGATATAATTGTAAATTTCCG ATACTACTTTCttccaaagaacattttaagcctaatttgaggtttgtagc accaacagaacagattttaggttttatttcaAGGCAAAACCCTGTTTTCC CCCGATTTCAGTCAGTTTTGGCCTAAATACCtaattctttgaattttata tatatggtagaggtatataattgttacattctcatcctacttttttccaa agaacattttaagcctaagtTGAGGTTTATAGCACAATCAGAACAGATTT TAGCTTTTATTCCCAAGCAAACCCCGTTTTTCCATGTTTTCGGTCAATTA TGGCCTAAATAcctgaatttttaaattttatatttatgctagaggtatat aattgttacattccaatcctacttttttccaatgAATATTTTAAGCCTAG TTTGAGGCTTGTAGCAgcaacagaacagattttagattttttcccaggca aaaccctttttttttagtggtttcggtcaattttggccTAAATACCTAAT CATTTGAAGTCTATGTATATggtagaggtatataattgttacattctagt CCTAGTTTTTtccaaggaatattttaagcCCAATTTGAGGGTGGTAGCAC CAACAGAACAGGTTCTAGGTTTTTTATCCAGGCAAAAATGCCCGAAATTG GCCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNCATTTCGGGCATAAAAAAGGCCGGAGAAccg tcaaaaattgaaaaaatcaaaaaatatctcaGATTTGTGTTATTTGGGTC CCAAcggaccaaaaaaaattatgcaaacttaatttcgaaaaaaaaagtct ctatagcccactgctaattatagatttataaagcccgaagggctagatgt cgtgcttaaAGCCGTCGCaggtaaaaaaagtgaatatcgtaaaaaatatt gttcctattgttttcgaaaatcttctgatcggtcaagcgctgaaattcta ttgtaatatcacgtgacctaggtagaatttcctacctaaccacggcacac ttttcatcaaaagtacgccatctagcccttcgggctttataaatctatgg tttgAATAGGCAAGAGTCTACTGTGTCTTAGTTTTATGGCCGTTGCGAAC TTTATCACTttgttttacatattttttatagACATTTGGTAATCTGGTGC AGACGGTTGAGGAGACTGGGCTGATCATGCGTGAAACACGTGACCTTGAA GAGCAGGTGGACAACATTAATGAGGATGAAATTCACCAAAACTTGACCAA GATCAGCAAAGATTTGAAGCaaattaaagaagaaaacagtGAAATGATTT CCAAATTGAAGTCAAGAAAGtagaatgtttttttaatatatctaatcttg tttttttattagGCGAGGTCCACTTGATTCATTTTTGCTTTATCCTTTGA TGGGTTTGATTCTATGTACTTCATAATTTCTAGCTCTTCCTTCtcataaa tattttatttgataCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053504TCONS_00053504Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053504-proteinTCONS_00053504-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_232supercontigscaffold_232:89988..96555 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
49.29 49.93 14.22 10.23 29.95 21.98 34.12 35.94 30.77 29.56 29.2 22.77 24.84 24.45 36.96 46.46 41.18 46.08 28.34 30.4 29.11 26.77 41.58 39.58 22.46 23.67 30.97 27.27 46.07 37.91