TCONS_00053504-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053504-protein
Unique NameTCONS_00053504-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053504-protein ID=TCONS_00053504-protein|Name=TCONS_00053504-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
ERQEKREKEIDDLRNQLNELTERFENTQITIKQLTAQKQQMDEQSVKMET
SNKDAENAYRVKKKTFDLLPESEENLNKLMQLVENSSQKLVTLNEQWEKH
RAPLIQKYRELKEQSKNRQSEVETRIEQIRVLREKMKSVTDDTRDKEEML
KQLVSEYESLSKDVNRSSYTKRILDIVASIKKQREQIAKILLDTKTLQKD
INFLTGKLDRTFTVTDELIFKDAKKNEFSRKAYKLLANLHETFGNLVQTV
EETGLIMRETRDLEEQVDNINEDEIHQNLTKISKDLKQIKEENSEMISKL
KSRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033776XLOC_033776Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053504TCONS_00053504Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..163
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableCOILSCoilCoilcoord: 69..96
NoneNo IPR availableCOILSCoilCoilcoord: 3..58
NoneNo IPR availableCOILSCoilCoilcoord: 272..299
NoneNo IPR availablePFAMPF05667DUF812coord: 1..271
e-value: 2.6E-104
score: 350.2
NoneNo IPR availableGENE3D1.20.120.570coord: 168..302
e-value: 0.064
score: 12.2
coord: 1..167
e-value: 1.2E-5
score: 24.4

Blast
[Close]
BLAST of TCONS_00053504-protein vs. Swiss-Prot (Human)
Match: CCD22 (Coiled-coil domain-containing protein 22 OS=Homo sapiens GN=CCDC22 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 1.987e-82
Identity = 133/295 (45.08%), Postives = 200/295 (67.80%), Query Frame = 0 
Query:    7 EKEIDDLRNQLNELTERFENTQITIKQLTAQKQQMDEQSVKMETSNKDAENAYRVKKKTFDLLPESEENLNKLMQLVENSSQKLVTLNEQWEKHRAPLIQKYRELKEQSKNRQSEVETRIEQIRVLREKMKSVTDDTRDKEEMLKQLVSEYESLSKDVNRSSYTKRILDIVASIKKQREQIAKILLDTKTLQKDINFLTGKLDRTFTVTDELIFKDAKKNEFSRKAYKLLANLHETFGNLVQTVEETGLIMRETRDLEEQVDNINEDEIHQNLTKISKDLKQIKEENSEMISKLK 301
            E+E++ LR QL  +    E  +  +K L     Q + +    + S  + E A R+K +  +LLP+   NL KL  +VENS+Q+++ L  QWEKHR PL+ +YR L++    R+ E   R+ +I+ L + +++  ++ R KEE+ KQL+SE E+L +DV+R +YT+RIL+IV +I+KQ+E+I KIL DTK LQK+IN L+GKLDRTF VTDEL+FKDAKK++  RKAYK LA LHE    L+QT+E+TG IMRE RDLEEQ++     +   NL KI +D + +++EN+ ++ +++
Sbjct:  331 EQELESLREQLEGVNRSIEEVEADMKTLGVSFVQAESECRHSKLSTAEREQALRLKSRAVELLPDGTANLAKLQLVVENSAQRVIHLAGQWEKHRVPLLAEYRHLRKLQDCRELESSRRLAEIQELHQSVRAAAEEARRKEEVYKQLMSELETLPRDVSRLAYTQRILEIVGNIRKQKEEITKILSDTKELQKEINSLSGKLDRTFAVTDELVFKDAKKDDAVRKAYKYLAALHENCSQLIQTIEDTGTIMREVRDLEEQIETELGKKTLSNLEKIREDYRALRQENAGLLGRVR 625
The following BLAST results are available for this feature:
BLAST of TCONS_00053504-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD221.987e-8245.08Coiled-coil domain-containing protein 22 OS=Homo s... [more]
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