XLOC_033761 (gene) - C. hemisphaerica

Overview
NameXLOC_033761
Unique NameXLOC_033761
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_231:170301..172290-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033761 ID=XLOC_033761|Name=XLOC_033761|organism=Clytia hemisphaerica|type=gene|length=1990bp|location=Sequence derived from alignment at scaffold_231:170301..172290- (Clytia hemisphaerica)
TTCGAACTCAACATGATCCGTGGTGATTTTTTCGTCAATGAAAGTTATAA
TGGTTGATATAGTATCCGTATAATGGAGATTGTGAATATTGTATGCAGTG
ATGGTGAGGTTTACTGATTGGTCATGCTTCGTTGGCATTTCATGAAAATA
TACCTCTCCATGCTCATTTATGGTGAAAACAGTTTCTGCAACATTCGTTT
GTAAGTTATAAAGAACCAGGCAATTGTTTTCTGTTGGGTATGCTGCGATG
GTTTTAGAGAGTTCTGCTCTATCGAGTTCAATTTTCCGAGGATAGGTCGA
AATTTTCGGTTGACACGGGCTTTTTCTGGAGACCAATTTCATCGAAAGGT
AACCGAAAGTTTGTTTGGTAGGTGTTTGATGGTCGGTTGCGGAAATTGTT
AAGTTGATAAAACCGACCTGGTCTAATGGTAATGGTTTAGTCAGTAATAT
GACACCAGTGTATGAAATATTAAAATGATTACTAAGCATCGATGGAGCTA
AATTGTACGTAATATTCCCGCCGTCGCTGAAGTCTGTGTCAGTTGCGTGC
ATCGTGGCTACGTATGAACCTTCCGGAGATCGTACGTAGAATTCCGTTAC
GTAATTTTGCTGGTCAAAATTTGGTGGGTGATTGTTTATGTTTTCAACGT
CAATGAAAAGTTTAGCGTAAGCTTCATACAAACCGTCCGTCGCTTTTAGA
TTTAGCTCAAAATATGGATAACTTGTGTACTCGATTGATTGTTCGATGGT
CAAATAATATCGGATAGCCTTTTTCGATGTCTGGTCTATTTTTTTGTTAA
GTTGAAATGGTTTGACAGTGAAGATGGAGTTATAGTTCAGAAGCTTTAAT
GAGAAATTCCCTTCGACGGAATCTTCATCGTGTATAGTGACGTATGTTAA
GAATTGTCCGATAGGATTATGTTCTTTGATGGTGAGATGTTGTTTTGGGA
TGGAAATTGTCGATGGATGATTATTAGAGTCTGTGATTGAGATCCTGAGC
GATGCCGTGGAAGAGAGGCTTGGTGAGCCATGGTCCTTAGCCGTGATGGT
CAAATCAAAGAATGTGTTTTGCTCATACAACAGTCTCTGTATCAAACGAA
CAACACCGGTATGAGAGTCAATCATGAAATAATTATCTCCCAAATTTTCT
TTACTACTGGTTAACGTGTATAAAATCTCTGCGTTATCTCCATCATCAAG
ATCGGTAGCGTTCATGGAAATAAGTGACGAGTTGACTTCTGTTGCTTCGG
AGATGCTTAAGAACATATTAGTGTTTGGGAATACTGGTTGGTTGTCATTG
ATATCTTGGACGGTGATATTGATTATTGCTTTGGAAGAAAGAGAAGGTGA
ACCACAGTCTGTTGTCATCAGTTCGATCACGATGAATGGCTCATCTTCAC
GATCTAGAGGTTCTTCTAAAACTAAGCTGAAATATTTACTGTCTTTTTTA
TTGTAGACGATGGAAAAGCGAGATTCGTTGTTTTTCAATGTGACGTTTGA
GATCATTCCATTGTAGCCAGAATCTTTGTCAACTGGTGAGAGCAGGCTCA
ACGAGTGACCTACTTTGAAGTACTCCGAGATTGAGAGTTGTTTGGTGGAT
GGATGGAATTCTGGATAATGGTCGTTCACGTCGATGATGTCGATTATAAT
CTGACTGAGTGATTGTTTGGAGAATTCGTTCACAATGAAACAACGAATCG
ATTCAATTTCTTCACGGTCTATTGGAGAGATTGTAGATACAATCCCGGTG
GATACGTTAACGTTTACATATAAAGGGTCAATATTACGCACAAACACAAC
TGTTCCGTTTTCAATCGTTGGTATTCTCCCTAATGTCAATGGTAGTAGCT
CATGTTCACGGACTTGGAACCGATAGGAAAAGTAAGCTCTAACGATAGGT
AATGTCAGTGCTAAACAAAGGAGGATGAGAATCTGTTGTTGCGCCATTTT
GATTTCTCATGCCGATTTTTCTTATTACTTCTTATTTCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053485TCONS_00053485Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053485-proteinTCONS_00053485-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:170301..172290 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CDHR1cadherin-related family member 1 isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.02	0.07	0	0.07	0.05	0.08	0.08	0.12	0.16	0.03	0.7	0.82	0.32	0.59	0.63	0.36	0.44	0.73	0.47	0.73	0.05	0.22	0.53	0.61	0.03	0.06	0.18	0.15