XLOC_033562 (gene) - C. hemisphaerica

Overview


Name	XLOC_033562
Unique Name	XLOC_033562
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_226:582931..594321-

gene from alignment at scaffold_226:582931..594321-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033562 ID=XLOC_033562|Name=XLOC_033562|organism=Clytia hemisphaerica|type=gene|length=11391bp|location=Sequence derived from alignment at scaffold_226:582931..594321- (Clytia hemisphaerica)
CCCAAATGAAAATAACCATCATTTAAGTTGATTAGAATAATCAAAATTTA
TGTAATATAATATCGGCTCATTGTTTCTTGTGAAGAACTTTGAGTAGCGA
TTGATTTGACCCTGTCAAAATCGGGGAGCCTTATCGCTCATTAAGCTTGA
ATCTGTTTTTCTACTCGTTGTTTATAGTTAGGGATCTTATATCAAACAAT
CTACAAACCGCTTACATAAAATTTCACTGTAAGAAAGTCTCTATAGCTTG
GAAACACACGCGGGGTTGAGTTTTACAGACTTATAAGGATCTATAACCTG
GAGGTTACCAAACAACTTGTCCAGTTTAGAAGACTATTCAATATTATAGA
GACACGGGTTGCTACAAGTTCTCTCTAATTTTGGTAACTTGTTTTTGGTA
GAAAATTAACGAAAAATGGAGCTGGTTAAATCTCAAAGTACCGCAATTTC
TCACGGAAAGACATTATGGAAAAATGCAACGAAGTCGTTATTGAAAACGA
AGAAAATACAAGAAGGGTATACCAATCTAGATATGGGATCACTATCTGAG
GTAAGACCTACAAACCTTATCGAATATTGTTGAAGGTCCCATTCGTATGA
ATTCCCCACATGACTAACAAAACTTTTTGATAAAATAATGTCCGGTAGGC
CCATTTGCCGGACATTATTTTATCAAAAAATCTGTAAATAAGAGTATGGG
AAGTCTTGATAAGTTACGTAATTTCCCCCATTATGGAAACAAACGTTTGA
ATCTGTACAGGCGATTCCTTACGAAAATCGAACGTTTCCTTCTACATGTG
CACAATGGTGGAGATTATGTAGCTTAACAAAACAAGTGCAGTAGCGTAGA
CAGGGGTGAAGGAACATTCGCCTAGGAGAGCAGATTTAAACGGCACAGTA
ATTATGTTTTTCTACCACAAATAGGTAAGTGTCTTGTCGTAAAAGTCTGC
TCTCCTACGCAGATCGTTCTTCACGCCTGTCTACACTAGTGTTGTGCGAC
TTTTTTCCACGATTTTTATTGTTATAATTATTGTTATCATGCACGTTTCA
GGTTCTGTTGCATTCGCTACAAGAAGAATGGGAACGAAAGACGTCTTTCA
TGAAAGAATGTCCACTTTTCGGACAGTGGTTACCGAGAGAATTAAAAGCC
GTTGGTGCCACCGCAACCGTTTGTGAATTCCCAGAAAATAATGTAAGATA
TCAATGGATCAAATTTTCTTCCCGTGAAAGACCCTCACTAAGTAAGTAGT
TTAGGTATAAACTTATTAATTTCGCATAGCGAAAGTATTACAATAGGCTT
TCGCGGTGGCGGCGGTGCGGAAAAAAAATTAGAAAACGAAAGTAGTTGAA
ACTTCTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNTTTCGAGGTAGGGTCGGTCGGGTGACGGCAAACCAA
CAATTTTTTGGAAAATCTATCACAATTACAATTGATAGCCAATTGCGCTT
CCTGTAAAATCTTGATTATCGATTGTCTATCAATTATCAAAATCAAACAA
TATGCAATCCATCGATTATTTATCAATTAGTCATTGATTGGAAAAAGTTA
TCAATTGTATCGATTGAGAGTCTGGCATGTTGGATTGGCGCTTTGTACGT
GGGATAGTGGTCATTGGACCTTGGTTGCTAAGCAGGCGTCAAAGTTTGGG
ATTCCCACTCACAGCGGTTCACTTGGAAAGTGAATGAGCCTTCACCCGGG
TCAACCCAAATGGATGCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCA
AGACTGTCGTTGAAGTCTATATCAAAATCTTACTGGAAAATTTGTATCAA
CTTTGATTGAATACTGTACAATGGATTTGAGTTTTGATTGATCAGCTATA
TTTAACTCAAAAGACAAACTTTTGTATACAGTGCCAGACTCCCACTCAAA
ACAATTGATTCATTTCAATCAATTGACTGGATATCAATTGGTTCTGGTAC
CGTAAGTTGGTCTAATGTCGACATCCCTCTTCTAATTCCGACACCCTTCT
TTAGAGATACAATTATCCCTATCTTTAAAGAAGGATGTCAAAATTAAAAG
GGGGATGTTGACATTAGACCAACGTACAGTAATTGATAGGTATTCGATAA
TGTTATGCTAATTATGACATTAAGGAAGGCTCGATTACATTAGTTGATCG
ATTATTCAATAATTGCCTCTAAGATTATCAATCCAGATTGATTATTTAAT
GGTTGCAAGTTTAATCATTCAAATCCAATTAATGATCAATATTCAAAATT
TTCTAATAGGCTTCATTACCTATCGAATATTGGAACAAATTGATTGGTTA
TTGATCAAAAAAAGAAAAAGAAGTCAATCAAATTTGAAAAACATTTTTGC
AGAAAAAAAATTGGCCTTAAAATTTCAAATTTAAAATATTTATGTCATTT
TCCAAATTTGTGCTTTTCGAGCCTTGAAACAGTTATTTTTTTTATCTAAT
AGCAATATTTTGCCAGAAATAGCCCTTAATGGCAAAATTAAATTCTTTTT
ATATTTATTTTTCAAGGCATCGGCAAAATAAATGCCCGTCAAAGTTGATT
GTGTTTGATTTTGTTTTATTGAGATAGTATATATTATGTATCTGTCATTA
AAGTCTGTCATCTCAAAAGTATGTAGATACTTTAGTTACCTTTCAAACAA
ATTCTCAGCACCAAGTTATGCTAAAGTAGGAAGTTATATACCGTTAGAAT
TGGAATGATATATTAGAGGTGAACAATCTATATGACTATAATTTTGAAAT
ATTGAGAAAAACTACATGTTTTTTCTTTTATAAGCATACGCAGGCTCAGT
TTTTGGCACCTAAACAATGGCTCTTTTGTTTGAGAACAATAGAATGCTAA
GCATAATGCGAGCCTGGTATAGGGGCAGACACATGCTTATAAAAAAAAAC
ATGTATATTTTTTGATTTATCTACAAGGTGTAAAAATTTTAATATTTTTG
TAAATAGTCAAAGATATTGGTATGATATTGATATGTAACTTGGCCACACT
GGGATAGTTCACATTTGGGTGACAATAAAGCTCTAGCCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNGGTTTTTGACCTTCCCAAGTCTCTG
AATTATTTAAGGTACGAAAAACTTGAAAAGTCATAAAAATCTCTAGAAGG
TTAGAAATTTTTTTGAAAATGTGCTCTACGAGTCACATTTTCGCCTTGTC
TCTGTAAGGGTAACTTTATTCTCTGTTAGAGCCAGTTTTTCTCAGGTCCG
ATTGACATTCTCCAACTCTAGTACTCCCCGGTCGTTTTTAATATGATTAT
TTCATCTATGAATAATCAAATACTTTGCGAAATTTTCGACTCTGAGTCGT
CTTGTTTCTTTTCTTATGATTTTTGTTGACGAAAAATCATAAAAAAGAAG
TAAGTTTATACCTAAACTACTCACTAAGTAAAACCGCTGTTTTTTTTTAA
ATTTCGAAGGTTTTCTAACCAACGGGAAGCCGTTATGGGAGCGGGGGAGC
GCAATCAGTCGACCGTGAAAAACCTATTGAGTAAAACATAGCAAAGTTGA
CTTACCTTCATCCCAGTTGAATACCGTGGTTGATTGACCTCTATCCAGCA
CTTCCAGCTTACTTCAAGTTCTCTTCCTATAAGTAAAGCGAAGTTTGGTA
CACAAACTCCAGAGGACGGATGCGATTTAAATTTAAAATTCAATAAGCGA
TTGAACTCCCTCCAGTAGTTTAATATTGATATCTGCTTGAGGAAAAAGAT
TGGGACAGGGCCAGGCGAAAGGAGTACTATACCAAGTTTATGTATGTGTT
TGTTTTTCTGCGACGGAGACAGTAAGGTTCTAATTTGAATAGATCCTGAA
CAAGTGAGGACGACGGTAAATCAGCACTTTTACCGACCTCGATATTGCGG
GTTAGAACTGCGGGTTATTCCAAAACGCTTCAGGCACTCTACCGTCATCA
AAAGTGCAAATACATAAACTCGCTTATGTTTATAAGGTGACGGATATGTT
TCAGCTAGAAATCGAAAGTAATAGAGCACAATTTTTTCAACGTTTTCGGA
ATATTCTCTGGGAAAAATTGCTCGATTTTCTCGTTTATAAAGGAAAAAGA
TTTTGGAAGCTTTTAAGAGATTGAATAATGTTTACAGGTTATCATCAAAG
ACTTGTCAAAACATGAAGGAATTGTTTATGCTATCATAAGTGGGCGGTGT
CTGGTGGTCAGTAAAATACACGTCATGAGAGAATCACCGCCTTACGGTCA
GCGAAAGATGAGAATGATTTCTAGCGCCAGGGTGAGTAAGAGAAAATGGA
TCAGTTTTAATTATTCCAAGCGTTCTTACTATAAAACCGAAGTATTCAGA
GGTAGTAGGCTTGGTTAGTAAAATCATAGAGGTATAAAGAAAGACAGGAG
ATGAATTTGTCGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGTA
ATAAATCAAAAGAAATTCTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT
ATGAGCATGCATACCTCGTAATTTTTTTAATCGTAGGGCGAGCATGGTTA
CAATAGCATACTTCTCCTGTTTCTTTATACCTCCATGGTAAAATACACGT
CACGAGAAATAATCAACAGCCTTGAAATTAACACGCAAAAAAATTAACAC
GAATTTTATTTGCTTTTTCAAGAACACCACGGCTGGTTTTAATTAAAGGG
GTTTTGATTAATACGAGATTTCTTAATTTGTGTTAATTACATGTCTACTT
TTTTCGTGTAATAAGGTAGTTTCAATATTTTGGTTGTTTTAACAGGGAAG
TGTTTAGAGGGCAAGCCAAATAGGTGCTGGGGCAAGCATTAGTGGACTGC
AAAGTGAATACACCTGTCAAAAGCCAACTTATTTAGACGGAAACTTGCAA
ATGGTCAGTCGAGGCTCCTCACAAAACCCTTTCAGGTGGTAGGCAAAAAC
TAAACACTTCTTTCCGTTTTAGAATCCCTGCTGAGGTATGCACCATTTTT
AGAATTCGAACTACAATCATGGACAAATTATTTGAGCCTTGGATTTCCCT
GCGAAATTCCAAACACCACAAATGATTTTTAAGCACATTAAACTACGGTT
GCAAAATGGAGTTTTAATTCTTGATTTTTGATTTTTGACATAAGACTGAG
GACCTTAGGATCTCAGGATTTAAAAGCTCGAATTTGATCCAATAAGGCTT
GGAATTTAGCCTAGAAGCCACTGAACCCCTACAAAATCGAAATATTCAAT
AAAAGAAAGTTGAAGGGCTAAAATAGTAATTCTCGCCCGAACTTTATATT
CTGAAAAACGTTAAAATACACTAAAATCTCAACATATTTCGACCATGATT
GTAGTCCACGTTATTGCATGTATGCAGTGGTATCATAAATATGCAAACAA
ACGAGCGAGGAAGAATCTTGGAAAAATAAGAGAACTTTTTAAGTCTTTCT
CTTACTTTAGGCAAACGAGAAGAGAGATCTTAAGAAATGTGAGCAAAAAG
AAATCATCTTTTTAGTCATACGTAAACTGGAGAAAGGCGATTGTTTTGGA
TTTGGAGAAAAGCTACCCGACACAAGCGTTATCAGTGAAAAGCAGGTAAA
TGTTTCAGAAAATTATCTCTTCTTGTCCTATATCAATTTGTTGTCAAAGT
TTCTCTGTATCTCGAACTGTTTTTTAAATCGAACAAAAGATTTAGCTTTA
TGAAATACCTGTATATTTCGATTTGGCCTTGCAAGTTAAATTAGATCACA
TCAAAACGAATCAATGAGTACTTAAGTTTATCAATCAATATTGTGGAAAA
AAAATTACTTAGGCTTAAATGATGTATTGTGGCTCGGTTAGCTGCTTTTT
CGAAAGGAAAGACGTAGCCCTGTTTGGGACCGGAATGTAAATGGACCAGA
ATTTTGATAATTAAGTGCTAAAAACACTTCACATCATTAGAGTTTTTAAA
TCAAATTCTACATCACTCCTTACAAAACGATTCACGGATATACTTTTTTC
CAGGTCGAGCTACTCTCAATCCCAACTGTTCAATTAATACGGCACGGATC
AGACCGGTTTCTCCCGGACGCGCGAACGAATGAAATGACGAAATACCCGA
CGCTGAAAGAAGCATTTATGAATTACAAAACGAAACAAGACTGGGAATCG
TATAAAGAACAGATCAGAGATAATATTTTGCGAAAGAAGTATTCTTAATG
GCTGGCTAAAAAAATTTCTATGAAAGTTGTTACAAGTTGTTACGACCAAT
TCTATAATAATAAGTTGACTTAAACTGATATGGTTTTTTTTTCAGACATG
AATCGAACGTGTTCAGAATTTCATGGATTTTATATTCTGGCCAGCAAATT
ATCATTTCAAGCTTTATACTTTTATAGTAAAAATTTTTGCTTATTATTTC
AAAGGTTTTGTTTTTAAATCAAATTTAATTTACAAGCTTTTTGATATTGA
ATTGACACGGATGTGGAGTAAGATTGGTCAGAAAGAGGAAAAGAAAAACA
TTTTTTTGCATATATCAGCATAATATAACAATGAGCAGACACTGTCCTAA
TATGAAATATGTGTCTGATATGAAACGGGAACACTTATGTAAAAATAAAA
CCTTAAAGACTTTATTCCTTTTTTCTCCAAGAAATTATACATAAAAGTCC
CAAGCCCTACATGTTTTTGCGTTCTCTATGAGCATCAAAGGGCTCATATT
CAAAAATAGTCAATATCCACATCTGATACCACTCAATAATAAAATAGTCT
AAGATTGAATAGTGATATAATTTTTTACAGATTTGCAAACATGGGGTTCG
AACCTAATAGTCCCATATAATTACTAACACTCTACTTTGCTAGTGTAGCC
GGTCAGAGCATCTCACTAGTATACATAATAATTTTATAAATATAAATATT
TTTTCTAGACTTTGCACTTTACTATATAATATTTTCAGCCGAAGAGCCAA
ATGTAAATTTTGGAGATTGAAATATACCATTATTATTATTATAATATTCT
AGGCTCAAAAGGAAGGGACAAAAATAGATCAAAAATCAACTTTCTTCAAA
AAGCGGCGACCGTAGTGCCATGGTATAGCATCCGGCTACGGTGCGCAAGG
TTGTGGGTTTGAACCTTCTAGACAGGTCATACCAAAGATTTCCAAAATGG
TACTTGACTCTCTGCTTCATGCTCAGCACAGGATCAAGGGTACGTGGAGC
AGTCCAGGGAGAAAGAGTGCACCCTCTCCTTCCTTCGGGTAGATAGTAGC
GAGTTTATGTATTCGAGATAAATCGAGGGGGACGGTATAAAGCAAAGCTG
ACATGGGGTCGAAATCGCCGTCCACTTTGCTCGACGACGGTAAAAACACC
AAAATACCGTCGTCTGTTTAGTGAGCAAAGGCGACATAGAGCCGTACATC
AACTATCGACTTTGTTTTGTATCATTTCTCTTACCGTCGCCCTCGATATC
CTCCGATACATAAACTCGGTAGTTATCGAAAGAGAGATAGTTATTGAAAG
AGCCTTTGGGTCGCATCCGACTGCGGTCACAGACTTCAAATTTGATGAAA
TTTGTTATTTTGAAAAAGGGTACATGGTTTCTGCCCCCCTCCCTTAAAAT
AAGGGGCGGGGGTCAAAAAAATTGCCTTTTAAAACAGGGGGGATTTTTGT
CATTTTTTTTAAATAAGGGGGGATTCTTTATCAAGGGCTGCAAGAATCTA
TCATAATAAGAAAAAAGGGGGGACTAAAATATTTGGTTTTATTGATAATA
ATTTTCTTTGTCTAATAATATCTTCTTTCCCGTTTTTGTGCTCACAATCT
CATGCCCACTATTTTGCAGACCATGCTATATTGAAAGTTATGTACATTAG
AATGACCTTTAACAGACCAAATCAAACCATAAAAACTATTATTCTCCCCA
ATTAGATAACGTTTTAAGCTGTTTTGAGGGTGTAAAAATCTGATGTCATC
CAAAATCAATGTCATGAGCATGAAATCTTACTTGTGTTTTACTGCCTAAA
TTCTCTACTTGGGAAGACCACTTACTCGACCTAACTTAAACTAGGACTAC
AATTAGAAAACATTCCCAGTTCAAATCTAATAGATAATTTCCAAGGCCTA
AGATATGAACAAAACACAACTGTTGTACCAGGTACTGCATTTTTTGATTT
TATTCATAAAAAGTTTTATTTGTATCATTTGATTATAGGATCCAGTTTAT
TTTCAATGATTTCTTTTTATTGAATTTTATTTAGTTGGATATCATTATGT
ACCTAATATAATGTTGATGGCATTGATATCAAACCAATCGT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053179	TCONS_00053179	Clytia hemisphaerica	transcript
TCONS_00053178	TCONS_00053178	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053179-protein	TCONS_00053179-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_226	supercontig	scaffold_226:582931..594321 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.82	0.79	1.54	2.61	3.31	1.96	16.47	17.47	20.08	23.16	12.68	16.45	2.74	2.46	1.33	1.69	1.01	0.85	2.67	2.86	2.33	2.57	2.34	3.06	2.45	2.98	7.52	7.94	8.41	5.32

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XLOC_033562 (gene) - C. hemisphaerica