XLOC_029384 (gene) - C. hemisphaerica

Overview
NameXLOC_029384
Unique NameXLOC_029384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_104:274456..276265-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029384 ID=XLOC_029384|Name=XLOC_029384|organism=Clytia hemisphaerica|type=gene|length=1810bp|location=Sequence derived from alignment at scaffold_104:274456..276265- (Clytia hemisphaerica)
TTCACAGTAATTTGACAGAGCAAATCATATTATATATATTCATCATTATT
TCACAAACAGAAAAACAAAACAAAATTATGTTTTAAAAATTAGAAAGAAA
TAAAAAATACTAGTGCTTAATCTTAAAGACTGTCCGCTATCATCTGAGGG
TGATACCTACAACTTTTATCGCACAAAACAGAAGGATTTCAAAAGAAATC
CCAGAAATAGTTTTTTTTTCAATTTTCGAGCAGTTTATCAGTAAAGTAAA
CAATGATTACTTTAAATATTTCAGAATACGGAAGCAGGCAGATTTAAATG
ATGCCTTTTCTCGGCGGTGTAGTTTTATAAAAATTATCTACTATTTGTAT
TTTTAAAAACCAAAACTAGAAAATAAAATGAAAAATATGAATTATTTCTT
ATTATAAATATTCAAATACATAAATCCAAAAAATTGCTTTCAGTCGGAAA
AAAATACTCTTAAAATGTGATATAGTTGCTAATAAGAAAACTCTCTAAAA
CATAAAACAAAATCCTGCTAAGTCTACTTTTGGCGTTTGTAGATTTTCAT
TACAAGAAATAAGAAGAGTTCCTTCGGGAAACCATTTTCATGTGATTGAA
TCATTTGACAAATTGATTTATAACTTTCCTCCTCGTATTCGGAGTAGACT
TTCTCTAAATTTAATTCTTTATACAAGTCTTTGACAAATCTCACGCATTC
AGCGTCGTCTTTCCCATAATTTTGTTTCAAGATCTCTCGTTGTTCAATTG
TGGCGATTTTCAGTGCTTGAATGATAAGCCATGAACATTTAGCATCTTCA
ATATCTCGACCAATTTTACCAGTCACTGCAGGGTCACCATAACAATCAAT
GAAATCATCCTGGATTTGGAAATACTCACCCAGCTTCATTAACACTAATT
CGGCTTCTTTAAACATTTTGGGATCTGTGACTCCAGCGATATGCATTCCC
AAAGACACTGGTAGATAAAACGAATAGTAAGCCGTTTTATATTTCACGAT
AGCTTTGTATTTTTCCTCCGTAAACAAATCAATACTGAATTCTTGATCGA
TCGGTTCAGAGGCTAACATATCCAGCTCTTGACCCATTGCCGTTAAATAA
GTGATTCTATGAAAAGCTTTGTAGAGCTCAAACAAATACGGCTGGTCCTT
AAAATGTTCACCTATAAGTTTATAAATACACTGCTCCATAAGATACGTAT
CATTAATTGAAACTAAACCCACTTTCTTGTACCAACAAGGGCGGCCGCGT
CTCAATTCCGAGCGATCCATGACGTCATCGGCGATCAAGAAAACAGCTTG
AAGAATTTCAATACACCAACCCAAACAAATAGCTTTCTTAACTTCATTCT
CAGATGGGCTTCCTTTTCGTAAGAAATCCACTGTGCAGATGACCATTAAA
CCACGCGATTTCTTCCCATCAAAGGTGTTATATTCGAGCGCTTTGCGAAG
ACATCCGGCAGCCTGTTTTAACTCAGGTAATGCTTCATCTTCGCTAACCA
GCTCGTTGACAATCTCATTAAATGAATCATCGAACTGTTGACGATAGGTT
TCGATCTTTTGCTTCAAATCACTCATAGATTGTGCCATTATTGTTGTAGT
TTTATGCTTGTTTGTTGCTTTTGTTTTGTTTTGTTTTCTAAGGAAATATG
GGAGAAAGATCAGTAATATGGACAAATATGAAACTGCTGAAAAACAGACA
AGAAGATTTAGGACTAGGAAAATTACAAAATGTTCTTTAAATCAAGAAGT
TTATTCAAGAAGGATTGTCCATCCTTCCTTCCCCTGAATATTTTCTACAG
AAAAAGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045971TCONS_00045971Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045971-proteinTCONS_00045971-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_104supercontigscaffold_104:274456..276265 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FDPSfarnesyl pyrophosphate synthase isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
50.35	48.73	9.96	5.23	29.73	24.89	27.52	30.86	27.88	36.48	37.96	17.7	20.6	13.41	17.98	22.63	30.49	26.21	14.79	22.51	23.65	23.33	51.17	51.9	16.77	23.29	60.71	53.02	57.38	56.11