XLOC_029358 (gene) - C. hemisphaerica

Overview
NameXLOC_029358
Unique NameXLOC_029358
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_104:42105..51177+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029358 ID=XLOC_029358|Name=XLOC_029358|organism=Clytia hemisphaerica|type=gene|length=9073bp|location=Sequence derived from alignment at scaffold_104:42105..51177+ (Clytia hemisphaerica)
GGTGATATACATTTCAAGCTGTTTCCCAAAGAGTATGTCATTTTTTATAT ATGCATTGATTAAGGCACCTTTATATTTGTGCCTTACAGGAGTGGTGGAT CAACTGGCCATTTCACTGAAAATACGATAAAACCTCCTTTCTCTCCCCTT GTTAACTCTTAACCAAGATAAGtcgtaaaattgaaaaatcgggaaaaatt aAAGTGGTAAAACTTTCCTAAAATTTGCGAAACTAcggaaattttttaaa acaagaGTCTCCAGTGAGTCTCCTTCCATGTAGGTAGGTAGGGGAGATAG GAACTAATCTCAAAATGCCACAAGCCCTTCGCCACGTTTGTTTACGGtta gtttgaaaaatctcaaactaTAAATTGCGAATGGGAACAAACCAACGGAA ATAAACGCTTAAATTTTCAGTAGATAATACAGACAAGAGATGCAGGAAAT GCAGGTGTTTTCCTCCCTATCCTGTAGGTAGATAGGTAGGATAGGAACTA AGCTCCCACAAAAAAAGGTTAGTTTCTCAGGGAGTAGCGTCCCTGCCTTT CCCAGCTAGATCTTCGCCATCATTGCATAGTTTACACGGTGAATGATCAA AAGTAACGAGTAACAAGAAAAGGTTTTAGTCATGTTTAGCCCCGAAAACT GTCATTTTAGCCTACATTTTGATAGAATCAAAGAACTTCGTTATAGTTTA TAGTTTATTATAGTTTTGACTTAATTATAGTTCCTTAATAGAATTTAAGG GAGAAATGGTATAGAATTATCCTCGACTAACTATAAGCGAAACattactt tgcaaaaaagtgagaTGGCCACATGCTTCTAAAAAGCCAAGAGTTATAGG ATTTATGTCAAAGGACCAAAACCACACCTTTACCTTTAAAATGCTTTCAA TAAAGTAAATAAACGcacacttttttttaagaaagatttTATACTTTATG TTCCTGTAGTTGTAGAAAATAAGCGCTTCTTTTAATTCTCCTTACTTTAA TGAGAAAGCCCTCTTCAATTATATAAGATTTCTCTattaatgacgtcatt aattaTAACATTTCTCTTCATAGCGACAAGCAAATAAAGTCGTTAAAGAA AGCAAATGAAACGGTTAAACATAAATAACATCAGGGTGCAAGCATAACAT CATATTGTGATAATATAAGACAGTGAAATCTTAGGCTTTGATGATGAAGT TCTGTTTGTAAAGTTTGgctgtgttttgttttttaacttGATTTATCTCT TTCAATATCGCCAGAAAGAGAAAATTTCCGGATTCCAGCAACTGACAAAA TGAGAAAGTTTGCAGGGCGATTTTTCACTGATGAAAAGACTTGAAACCgt catttttgttttaatcgaaagtaaattttatcAACTTGCAATTTCAAAGC GAGTGAAAGGTTCTATCAGAGGCTATAAGGTGAAGAAGACGTCGTGCCAA TAGGAACGAATTTTGGCTGGGCGGTATCGAAAGAGTTAAGCACGACGATA GTTGAAAGGATAAATTCAAAAACTCGGTGCAGTGAAGAAGCGGATCACTA AGGCCGGTCCGGCCGCGCACCCGCCGCGCAGCACCCGACCTTTTTTGTGG TTGAAATTCCCTAGAGAAGATTACGTCATTGAAAAAAAGCACCGcgctca aaaaagaaaattgacaactgttctacttttttttcgaagtcGCGCGAACT GTAACGTCATATTTAACCAACCGAATGGCTTCGTTTATTTCTAGGCCAAT GGTGTTCTAGTATTACGTCATGTTACAAAAAAGTCGAGTGCTGCGCGACG CTGAATGGCCTTTAGTTCCTTGATTTTACTGTATATATATATTAAGATTA CGACACTTCCTCAGCAAGAATAGCGGGTTTAAATCATGATTCCGCTAGTA AAAGATACGATCCATATGaatattgtatatttttaatGAAGTAACTGTAG ATACGTAACGTTATTTTAACGTCAGAACATTATTTGGAATAGCGTTGTTG TGTGCCTCCCGAGGAACGATCCTACGAACTCTGTGTGTTTGTGGTTTACC AACACTGACACTTTGGAAACGTAAACTGCATCCATTGGTCATTGGtgcaa aaattcatgatatgcgtaAGTCTGATTTTGCCCCCTCTGACGTAATCTTT TTAGCATATATGGCGAAAATTATGATGTAACTGCTCCTTATATGGTAAAA AGATTGCGTCAGAGGGGGCAAAATCAGACTTACGCTTATCATGAATACAA GTGTCCGTCTTTTAGAGATGTCCGCATATTATAGAGAAATGAACTAAAAT CAGTTGTATTAGTCCTTTCGTTCCTAGGAATAGTGTCTGCAATACTTAAA TATCTTTTGcgtatcttaaaattttatcattttatcgaAGTAGTATATTT TTCCAAAGCAATTGGATTGTGAAAGCtaaaaaattgcctaaaaataTTTG TCACTATATGTAGCCTGTTGCGAAATGAttgcagtgccgtaggaagcatt tttgtttttgagggGGATAAATTtcagtgacaccgcgagggccaaccatg gtttgtcCCGAGGGggcgattttgaaaattggagcCTCTAGATGGTCTAA AAACGCATCAAAATAGCTTAATAGTTGTGatataggaagaaaaaaatatt attaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGACATTGCCCCTACC CCCGGTTGCTATGGCACTGGATTGTCAGTGATAATTGCTCCTATGTAGAA ACCAATTCTTCCGTGTCATCCTGGTTTCTACATTAACTGCTTTTActgga aatatttttgaactaCTTTAGTACTGCACCGACAAACTCAAGCGTAATTT ACCTTTGTGTAAATATGTTGCTTTGGGCTATTAAAGGCAGTCGATCGAGG TTTATAGCCATCTAATATCAGTCCGACTaccgattaaaaaaattgatgat gttGCAAAACTTTTGCagtttttttaatcaatcaaAATAGAACAATAACA TCAGTTTATTGTTTATAGCTAACAATGAAAGTGTTACTTTTGTTATCACC AAATTGCAGTCCAGAAAACTTGCAATGCTTTGGCTTAACATAGAATAACA AACATTGGAATAAAAGGTCAGTGTTTTTTCAACCTTCTTGCTTTTCACTG CTGACGCGCTGCTGACTCAGTATATGGAATATTAACCCGATCGATTGCCT TTAACTTTATGATAAAGAAATAACTGAGaagcttcattttaaaaattaag aatttatttatttaattataCCTTTGTGTATTTCCATAGGTAAGTGAAAC CACTTACGTGGCAAACTCTATTACAGTGAAATCTCTCGTCCCATAGAAAa caatataatataaaaagatagctGATAGAAGATGATGTTTTCAAGGCTTT GGTACTCAGACGAACTCGACGACGAACAGAAAACCAAATATCAAACTTAT AGAGTGTTAGATTCGTCAACAAAACATCTTGAATTACCACCGCCGACATC GTTGCCAGGCGACGATGTTTGTGATCAGAATGATTCTACTATCCAAGTAA CGGTCTACAATCTACCACCACCAACCGGACCAGACAGAGTCCAATTGATC TTCAAACGCCGATTTGACCAATCCAACCACACGTTCGATATCAAAAAACA CATCACCAAGGAGTTAGGTATACCTGCAGAAGCGCaaatcattttaaaat attaccAGCGTTCAAAGTCCTATAGAGCTTCACCGTTGCCAGAGAACATC AAACTCTCCTATCTGTCGGAAAAAGGAGATCACGAAGAGAGCTTGACGTT ACTGTTGGCTGTTTGCCAGCAGCGGAGTGAATGCAGGGAAAAGTTTGGAG AAAAATTAAACGAGTACAACATTGCAGAATTAAGTGGATTAACTGTTAGG GGTTTTGCCACCAAACATATTATGATGATGCTTGGGACAACGTTTTCTAT AGACTTGGTCAGACTCAACATTCTTAATCTTACCGGGTTACCAAGCGACG AGCAATTGATTTACGACCGTAACGGTTTGATAGTGACTTCAGATCTACCG AAAGATTGTGCGTTTAAAGACCTTTACGTAGCTACTACAAGTTTGAGGCG TGAGGTGCTTTGTTTCGATTATAGCatcaaagtcttcaagatgttCAAAT TAACCTTCTTGACTAAAATGGAGGAACTTGAATTAGGGAAGTATCCGACA ATCGCAGATGTGAAGAACTACTTATTTGACCAGCATCAGATACACAAGCA TAATCAGTCTTTAATGTTGCAAGGAACGGAGCGCCAAGATTCAGAGGAGA TATTGGCTTTGGCAGGCCAGGAATGGAGCTGTTCCAACAAGGAGTTGATT CTTCATTTGTTGGTGATTCGAGGAAAGTTTGACGTACTTTTTGCCCCGTG TTGGGAATCCGATTTCCAGTCTGGCACGAATTGGTCCCCAATTACTGTTC AAGATTCCAGCACTGTGGAGGAAGTTAAAACCAAGTTAGCTGAATATTTA AGAGTGGAAACTCTGTCGTTCAAATTGTCCTTAAAAGACGCTAAAACAAA AGGAGAGTTTCTACCGAATGATAAaacaatcaaagattttgactCAACAT TTCCGATACGTTTCAAGTATCACCCGGTTTATACGTATCGGGTTTTCAGT AACGAATCTGAAATCGGGGAATTGTTAGAAGAGAAAGAAATCATGTTAGA TACAGAAATCACAGGCTGGAGTCTTGTAAAAACCATCTTGAAAAAATACA GCCGGACCAAGAAAGACATCAGGCCTGTACCGGTTGGTAAAGCAGCTAGG TACACGTCACGGTTTCGGTATCCGGACGATTTGAATCATCATGGGCTGGA TGAATCTTTGTGGAGGAGATGGGAAGAAGGCCAATGTGTCCAAGAATTTG TCATTTACAAAAAGACTAACGACTGTGTGTTAATGTAGAATAGTTATTAT GAGATGGTCTACACTTGCGTTGTTAACCCTTTGACTCTgcagtgtttttg aaaaaagtgaaaagtttccacaattttttttacataaaattcaaacttta aatGGTTGTAGCAGAGCGGAGACCGGGCTTACAGACTGTATAttaaatat ataatatatacgTGGAATTCCTTTTCCTAAAGAACGGTCTACACTTGCGG AGTGAAACACTTGCGGTAACTTTGAAATGAAGATTACGTCATGCGTTTGC ACGACCATGACGTCAGATTAAACCAATAGAGTCGTTATATCTTTTTTTCG ACCAATGGCGTGACAGAACGATATTAAAAAAATCGTCACGTGATCTGTTC TATGAGTGCAGACCGGCCTTAAAATGTCGTATGTAATTTATACTTAGAAA AATGTGTAAAATAGATTTAATTATGTACAGATAATATACTGCCAaagcaa aatttcttcaaatacTGAAACTTTTGTGGTGTGAGCGTCAAAAGCAGACT TAATAGCATGAAAAACGTACCTCGCTTGTAAAGCAAACCTGAATATTGAG TCGCTTAAAATACGATAGATTTCCTAGAGGGTACACCAAAATATGGGGGA AATGATTGTAACTTTTTGCTgggaaaattgggaaaatgcGGAATTacggg aaaattttaaaatctcttGCATAATCAAgattgttgtaaaattttcccgC AATTCCgaattttcccgatttttccaGCAAAAATTACCGATTTTAGGAAA TATTTACCACTgtaattttcccgattttttcgatttttcccCCAATGTTC TGACCAAAAAGATTACAGGTGGTTAGGATGGGAATTAATagtacacaata gacagctgcAGGCTTTTAGGATTTCCTCTTGGTCTATAGGTTTTCCTACG TTTTTTTTAGCCAAAGCGCATATCCCGAAGAGAAGGAGTTTACGCTCTGA ACGAAGAAGATATGACGTAGGACTTAACTCTTCTTAAAGTGGCTATTTTC TCTCAGGGAGAAATTccgtcaaaaaaattttttttctttacttctTAGAT GTCCGAAAACAGTAGAGAATTTTGTCACTCATTGTCGAAATGGATATTAC AACGGACACGTCTTTCATCGAATCATTAAACAGTTCATGTTGCAAACGGG TGACCCTCTAGGTAAGTGAGTCTCGATTATTAGAAGATTTCCTTTACAAA ATATTATTAATAAAACTTACTGAACAAATGAGTCAAACACAACATAAACA GTTCATGTTGTAAACGGGTGACTCTCCACGTAGGCGAGTCTCGATTATTT CCTTTACAAAATCGTATAAAGACTTACTGAACAAATGAGGCAAACAGACA CAACATAAGTTTCCATCGAATCTCGAATGTATGATGCCTTGAATGCTTCG AAGTCGTGAGTCATTTTTGGCGTGTTCTCGATTACAGATGTTGAAAGTTT TTGTATAAACGAGGCTGGGATTGTCAATGGCATATCCTAGAATCGGATAT GGCATATAATTCATCTGTCAAATTGAGACCATGGCGTTCTTTAGTACAAA AGTCTCTAGAAATCGCTTGAAtaaaagagagaaattttttgtCTCGATGC TTCGTTCTCCTAACTAGTTTAAGGCACTTTAAAGACGGAAAACTTGAATG GCCAAATTGTTGGCAGCTCCACAACCTCGTGGTCAAACTTTTTGGCGCCA GAAAATCCATTACGTATTCTTCCATATATGGAAACATCCGGCTTTTTGGG TTGTTTCCGTAAAATGATTTGCGTAATGGATTTCTTTCATGACCAGAAAG TTCTGATCAGTTAAGGCCTTACTTATACAAATCAACCAAAACGCTAGACT TGAAAACAAGTCTGTTATAAAACACGTTATAATTAGGAAAAACTTCAATC GGTAAAAATATTACGCTCACGTGAGGaggaaaaacaacaaatttgacCAT TACGTTTCGATTGCTTTATGTATGTTGCTGGTCTCATTAAACGAATAGTT AACTAAGTCTATCAAAATGCCAGAAATTAATTTCGGCCGATAGGTTCTTG AGCCTGTACCAGACGATCTTGTATTTTCCTTGCACACAATGATAAAAAGA ACTGTAGATAGTTCTAGTACAGGCTAATGGAAACTGACTATTATTCCGAA TGAAATATTTTCCAATGATTTTTAAACATCTTACAGGTGACGGTACGGGT GGAGAAAGTATTTGGGGCGGCGAATTCGAAGACGAATTTCATCACACCCT TCGCCATGATCGCCCCTACACATTGAGCATGGCAAACGCAGGCCCGAATA CCAATGGCAGTCAATTCTTTATCACCGTTGTCCCCACTGtaagttctttt tcttttggaaatcctttttaaatttcgccATATGCATCTGCGATTTTAGA ATATATATCAGCCCCAAGATGAGTAATAGAAAGCCGTATGCGGTATCGTT TTTCTAACTAACTATCCGAAGTTTCTAACTAACTATCCGGTACTAAAGTC TAAAGTCTGTTGGAAAAATATTGTCTGTGAAACTGGTTAAAACCGTTAAT ATGTAGAAACCAGGATAGGAAGAAAGAAGCAAAAagtaagtaattgataa tgtccTGGTTTCTACATGGAAGAAATTTACACTGACAATATTTTTGCAAC AGATGTAACAGGTGTAATAGATTACGTAATGGATATcataattttcaggt tttaaaTATGTACTCTCAGGTGCCGAATAAACGGAGGGGGCAaaataaat ggggggggggggttggaaaatttcaattttttttaataaacggggggggg gtttggaaaaattcaattttttttaataaacggggggggggtttggaaaa attcaattttttttaataaacggggggggggtttggaaaaattcaatttt ttttaataaacggggggggggtttggaaaaattcaattttttttaataaa cggggggggggtttggaaaaattcaattttttttaataaacggggggggt cgaaaaaaagggggggggggtttggaaaatttcaattttttttaataaac gggggtggTCGAAATAAACGAGGGGTTGGAATCTCAACTgttaaaaacac tgaaaacagGCTAAAAACAGGGTTTtaatttaacagcaaaataagagact taGCTTTGGTACTTCAGAAACTttgtcaaaaattaataaacggtaGGGTC CTAACAAGGTCCTGGGGAGGtcctggggggggggttggaaaaactTTATG AACGTCCCGTTTATTCGGCACCTGTTTGGACAATAAACGTACGTAAGAGG TTACACAAAAGAATATTTAGGACGTTAGACGCGTGTATGGCGGCCTGCAC ATAGATTTTCGTTAATAAATTTTGTTTAGACGAATTATGTAGAGGCCGAC AAAAACGCGTTTagcgtttaaaaaaaatttaaaacttttttttctcaaat tttagccCTGGCTGGACAATAAGCATACAGTGTTCGGACGTGTCGTCAAA GGGATGGATATCTGCCAACAGATGAGCATGGTGAAAACATACGCCAGAAA CGATAAACCgtacgatgaaatcaaaattgtaaaCATGGTTGTTAAATAGC GCCAGATCTCTCATGACTGACTCATCGTAAATCGTCTGTCGATTTAGTTT TAGATCACGATTAACCATTACCTAaccttttatacggaaacatcCCAAAA AACCGGGTGTTTGCCACCAGTTTTTGAATTTGTAACAATAACACTTACTC TTTTGTGCCTAATTGTAGGGGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045935TCONS_00045935Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045935-proteinTCONS_00045935-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_104supercontigscaffold_104:42105..51177 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0.07 0 0.09 0.06 0.52 1.03 0 0 0.07 0 0 0 0 0 0 0 1.31 1.76 0 0 0 0