TCONS_00045935-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045935-protein
Unique NameTCONS_00045935-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045935-protein ID=TCONS_00045935-protein|Name=TCONS_00045935-protein|organism=Clytia hemisphaerica|type=polypeptide|length=146bp
GDIHFKLFPKECPKTVENFVTHCRNGYYNGHVFHRIIKQFMLQTGDPLGD
GTGGESIWGGEFEDEFHHTLRHDRPYTLSMANAGPNTNGSQFFITVVPTP
WLDNKHTVFGRVVKGMDICQQMSMVKTYARNDKPYDEIKIVNMVVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029358XLOC_029358Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045935TCONS_00045935Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR024936Cyclophilin-type_PPIase
IPR029000Cyclophilin-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 33..45
score: 65.71
coord: 104..119
score: 52.57
coord: 7..22
score: 47.72
coord: 76..91
score: 77.71
coord: 91..103
score: 67.2
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 1..144
e-value: 7.2E-51
score: 172.5
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 1..145
score: 35.252
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePIRSFPIRSF001467Peptidylpro_ismrsecoord: 1..146
e-value: 1.0E-63
score: 211.5
IPR029000Cyclophilin-like domainGENE3D2.40.100.10coord: 1..146
e-value: 2.2E-68
score: 228.8
IPR029000Cyclophilin-like domainSUPERFAMILY50891Cyclophilin-likecoord: 1..145
NoneNo IPR availableCDDcd01927cyclophilin_WD40coord: 1..143
e-value: 2.34261E-97
score: 278.576

Blast
[Close]
BLAST of TCONS_00045935-protein vs. Swiss-Prot (Human)
Match: PPWD1 (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.323e-81
Identity = 114/146 (78.08%), Postives = 125/146 (85.62%), Query Frame = 0 
Query:    1 GDIHFKLFPKECPKTVENFVTHCRNGYYNGHVFHRIIKQFMLQTGDPLGDGTGGESIWGGEFEDEFHHTLRHDRPYTLSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKGMDICQQMSMVKTYARNDKPYDEIKIVNMVVK 146
            GDIH KLFP ECPKTVENF  H RNGYYNGH FHRIIK FM+QTGDP G G GGESIWGGEFEDEFH TLRHDRPYTLSMANAG NTNGSQFFITVVPTPWLDNKHTVFGRV KGM++ Q++S VK   + DKPY+++ I+N+ VK
Sbjct:  501 GDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 646
The following BLAST results are available for this feature:
BLAST of TCONS_00045935-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPWD11.323e-8178.08Peptidylprolyl isomerase domain and WD repeat-cont... [more]
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