XLOC_029203 (gene) - C. hemisphaerica

Overview
NameXLOC_029203
Unique NameXLOC_029203
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_100:582180..593171+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029203 ID=XLOC_029203|Name=XLOC_029203|organism=Clytia hemisphaerica|type=gene|length=10992bp|location=Sequence derived from alignment at scaffold_100:582180..593171+ (Clytia hemisphaerica)
AGCCTTGTGTTTTTATGAAtttaatcttataaaaaaagcgttgaGCGTTC GTTTCATTTTCCCCTTGATATCAAATTCCAAAATACTAGAATTGATTGTA ATAACAAGCCTTTCATATCCAGTCAGGTGactctttgtttacttttcaaa caGTGAATTTTGTAGAGAAAAAGTGCaagttttgttgtttgtgagatgag taaaaaggcgttttgaaatgcatgtttatattttgttaaaagtgaaaTTG GTACAATGAAGTAGTAGGAAGCATgtattcttaaatttaggcTAACCTTT CCATTTGCATCTGCAAAGATGACTGATTGATTGGTGTTCTGTAACGCCaa tcaaaaatattcaagccTAGTGACTTTCATAAATATAAGCAAAAATGGCT GCTTCCTACCTCAAAGAATATGGGTTCGATGTCGAATTTGTTGAAAAACT GGATAGGGACGATATAAAGTGTGCCATATGTTTTATGGTTTTACGAGAGC CATTCCAAGGGTCAAAATGTGGTCATAGATATTGCAAGAAATGTATTGAA GAGTTCCATGAAAAAAAGTAAGTTAATATTTTGATTCaatcagtgccgta gcaactggggggggggggcaataattttttcaaaaatttttcagaaatct agagctcaaattttcaaaatttcccccctcgggtcaaaccatggttggcc ctcgcggtgtcactaaacttcagcccccccaatatgaaaatgcttcctac ggcactgattcAATCAAGGATTCCCAAAGGCAACCAGCGGGGGgaccttt ttttccgatatGTTCTAAGAGcatgtttcagctagaaattttgatctgtt ataatcagatcttcgaaaatttATCAGCTAGAAATCTCTAGAAACGATGA TGTGTTCTGAcaagacaggggtataatcaaggtcatctaatgtgttcttg ttgtctaggtaaccctagaaagcttcagaacacatcttttggagacaggg gtataatcaagaaaaaattgatgtaatcttgttgcctagtaaccctaaaa tttttcagaacacatctatcgtggagaaaaacaaatatcttacaagtttg ttttggcgaactgtttttcctagattttagaacacatcaaaccataaagt agtgataagtttagggagacaaatagtgcgataaTAAACTGTAATCGAAT ACTATTTAGTTctataataaagaaaaattggTTATCAAATGCGCATTATT ATTAAAAACAGATTTTAGATAAACACAGGATTTCATAATCatataaaatc aacttttcaaagttttcagaaTGTTGAGTACACCCCTTAAGCGTTCATTC AAAGATATTCTCTCCCAGATAGGGAATATTTCCCTCTTGAATACATGCTT TCCAAATAATTCTAAGAAGAGGAACAGAAGAAAAcagtgaggaacagaag aggaacaTAAGAGAAATAAAAGAGGAGcagtgaggaacagaagagaaaCA GAAGAGAAAcagtgaggaacagaagaggaacagAAGAAAACAGTGAGGAA CAAAAGAGGAACAGAAGAGAAACAAAAGAGTAatagtgaggaacagaaga TGAACAGAAGAGAAAcagtgaggaacagaagaggaacagAAGAGAAACAA AAGAGTAATAGTGAGGGATAGAAGAGTAACAGAAGAGGAACATAATAGAA ATAGAAGAGGAGCAGTCAGGAACAGAAGAGAAACAGAAGAGAAACAGTGG ggaacagaagaggaacagAGGAAAACAGTGAGGAACAAAAGAGGAACAGA AGAGAAACAAAAGAGTAatagtgaggaacagaagaggaacaaAAGAGTAa tagtgaggaacagaagagcAACAGAAGAGAAACAGTGAGGAACAAAAGAG CAACAGAAGAGAAACAAAAGAGTATtagtgaggaacagaagagaaaCAAA AGAGTAATAGTGAGGGATAgaagaggaacagaagaggaacagATGAGAAA CGGCGAGGAACAGAAGATGAGcagtgaggaacagaagaggaacaTAAGAG AAAcagtgaggaacagaagaggaacagAAGAGAAACAGTGAGGGATAgaa gaggaacagaagaggaacagATGAGAAACGGCGAGGAACAGAAGATGAGc agtgaggaacagaagaggaacaTAAGAGAAAcagtgaggaacagaagagg aacagaataggaatagtgaggaacagaagaggaacagAAGAGAAACAAAA TAGGAatagtgaggaacagaagaggaacagaagagaaacaatgaggaaca gaagaggaacagaagagaaacagtgaggaacagaagaggaacagAAGAAA AACTGTGATGAACAGAAGAGGAGCcgtgaggaacagaagaggaacagaag agaaacagtgaggaacagaagaggagCAGTGAGGGatagtgaggaacaga agaTGAACAAAAGAGAAGCAGAAGAGGAATAGAAGAGGAACAAATGAGGA ACAGAACAGAAATAgaagaggaacagaagaggagCAGTGAGGAACGGAAG AGAAACAGAAGAGAAACAGTGAGGAACAGAAGTGGAACAGAAGAAAACAG TGAGGAACAAAAGAGGAACAGAAGAGAAACAAGAGTGTAatagtgaggaa cagaagaggaacagaagagaaacagtgaggaacagaagaggaacagAAGA GAAACAAAAGAGTAATAGTGAGGGATAgaagaggaacagaagaggaacaT AAGAGAAATAGAAGAGGAGCAGTGAGGAACAAAAGAGAAACAGAAGAGAA Acagtgaggaacagaagaggaacagaagaaaacagtgaggaacagaagag gaatataagagaaatagaagaggagcagtgaggaacagaagagaaaCAGA AGAGAAAcagtgaggaacagaagaggaacagaagaaaacagtgaggaaca gaagaggaatataagagaaatagaagaggagcagtgaggaacagaagaga aaCAGAAGAGAAACAGTGAGGAATAGAAGAGGAACAGAGGAAAACAGTGA GGAACAAAAGAGGAACAGAAGAGAAACAAAAGAGTAatagtgaggaacag aagaggaacaaAAGAGTAatagtgaggaacagaagaggaacagAAGAGAA ACAGTGAGGGATAGAAGAGGAACAGAAGAAGAATAGAAGAAGAATAAAAA AGGAACAGAAGAATAATAATGAAGAATAGTGAGGAATAgaagaggaacag aagaggagCAGTGAGGGatagtgaggaacagaagaTGAATAAAAGAGAAG CAGAAGAGGAATAGAAGAGGAACAAATGAGGAACAGAACAGAAATAgaag aggaacagaagaggaacagaagaggagCAGTGAGGAACGGAAGAGAAACA GAAGAGAAACAGTGAGGAACAGAAAAGGAACAGAAGAAAATAGTGAGGAA CAAAAGAGGAACAGAAGAGAAACAAGAGTGTAatagtgaggaacagaaga ggaacagaagagaaacagtgaggaacagaagaggaacagAGGAAAACAGT GAGGAACAAAAGAGGAACAGAAGAGAAACAAGAGTGTAatagtgaggaac agaagaggaacagaagagaaacagtgaggaacagaagaggaacagaagag aaacagtgaggaacagaagaggaacagAAGAGAAACAGAAGAGGAACATA AGAGAAATAGAAGAGGAGcagtgaggaacagaagagaaaCAGAAAAGCAA cagtgaggaacagaagaggaacagAAGAGAAACAGAAGAGGAACATAAGA GAAATAGAAGAGGAGCAGTGAGGAACAGAAAAGAAACAGAAGAGAAAcag tgaggaacagaagaggaacagAGGAAAACAGTGAGGAACAAAAGAGGAAC AGAAGAGAAACAAAAGAGTAatagtgaggaacagaagaggaacagaagag aaacagtgaggaacagaagaggaacagAGGAAAACAGTGAGGAACAAAAG AGGAACAGAAGAGAAACAAAAGAGTAatagtgaggaacagaagaggaaca aAAGAGTAATAGTGAGGAACAAAAGAGTAatagtgaggaacagaagagga acagAAGAGAAACAGTGAGGGATAGAAGAGGAACAGAAGAAGAATGGAAG AAGAATAGAAAAGGAACAGAAGAATAATAATGAAGAatagtgaggaacag aagaggaatAAAAGAGGAATAGaagaaaatagaagaaaaatagCGAGGAA TGGTGATTGGGTTAGTAGGGTTGTAGCTGGTCATTTCAGTGTTTAGCGAG TTATCGAGGATATCTAGGGCGACGATCAGGGAAGCCGATGCAGAACatag tcgatagttgatgtacggttCTATGTTGCCTTAACAGCGAACggtatttt agtgtttttaccgtcgtcgagaaAGTTGGACGGCGATTTAGCGACGTGTG GACTTTGCTTTATTGAATATATAAACTTGCTATTGACTTTAAAACTTCAC AAGAGTAACAGTAGGTATTAAAAAGGTTTGGCAAGATATGcacctttttt tataacaacaagtatgttttggctcaggctggacTGCTCCTAATTATTTG AAATtgtcaggcttaaatgttcttaataagCTTAGTTACTTTacttaaaa actgaaaatagtgggaattttattcataaaatatGGCTTTAAATCAAGTT TAAATTTATTTCGGCTTGTACACCCCCACCCTAATCGATGCGGGCGCTCT AAAACGTTGTCATTCATCAGCTTGTGTGTCTCAACGGGAAAAGttcaaaa tctgttaaaattagTGGTTTCTTAGTAATAAATGGACCTtaaggctcaga ttgttctcaatttgttcttaggttttagttaattttcagcctcgtgttct tacagaattgtttttttaaaaagaagtatTGCGTGACATGAAAATGTCTT TTAATATAAGAGCAAAATAAAAGAGCCCGGGGGGATACTAGGGTTGctag ctgacggggggggggggctgcccgactttcgaccttcggacccttaccgg gaccaaaaaggagaaaacaaaggaaaattttgggaattttacgaccctta gcgggacaaatttgacaaatttttgaccaaatttccatCTTttcgggggt aaaaagttgaaattttcctatttcttcGACCCTTAgtgtgactgaaattt gatgttctgatttttctgacccttagcgggactttggaaattcaaaaaag gtacccttaagggcggcacataccgtaccctctaTTTGCCTAATACCCCC TAATAAGGCCCTTAGAGCAtgcaatttcttagaaaataaaaacattcaaa ataaagaacatcTTTAGGCCGAAATTCAGAAAGTTAAGAATCTTTGGCGT TCCACTTTTTCGTGTCAATGTCAAGTATATTTGGCATTTCAAAAACGTCC ATAACAAATAAATTGcctcaaaaatttcttttttcccgtTTTTCTTTTCC TGGTGGCACGGAAAGTGTTAATAAAACGTATATACTTTTTCGATCGTCTT TCAGCCCAAAGAAATGTCCGCAAGATTGGCAAGACAACGAGTGGTTTAAA GACTTGGGAAAGGAAAGAGAGATTCTTGATTTGAAGATTCGATGTAAAAA TCATCGCGATGGATGCACCTGGCAGAACGAACTTCGAGATCAAGAGGTTT GATTCTTTCCGTAATGTGACATTCACAACTAGAGTTTAGGTTAAAAAACT TTAATGGAGGGAGAGGAAGCTTGATTTAAAACtactgttttgaaaaaaaa aagattagggTCTCGAAATTGCAGAAATGGTCAGACCTTCTAAAATTTCT CccaaaaagctttttttcttcattttttacatCCTTACGGCCTTATGGCA CATTCTCTCTCAAATCAAGCCCTACTGTACACTTTGGAAAGCCTAAAAAC AGGGCTGCAGTTTTAGACACTATCCCTTCCCTCGTAGTTGTACGTTGTAC ACTGACTGGAATAATAATTTATCTCCCGTTCGATTgaatacagtggaacc tctaattagcggacaccatcggggaaaggggttagtgtccgctaattaga agtttccgccttttagaaacttttgatctcggagctccaattttgaaatt aggccatcccagggtgtcgaaaatacaaaattggggtctaaagtacttat ctgcagacactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccg ccttttagagtgtccgttaattggaggttttactgtacatgctttcttta taagaaccagtagcTTTTGGTTCAGGCTACgccgttcttaatttttgaaa tttcaggcttgatgttcttattaggatgttcttaatatgCTTAGTTTCTT TTCTTAActtaaaatctgtaaaaatcaattaaaatcaattgtcttagtaa tttctgaattccgaggctcagattgttcttaatttgttctttttgGACTA TTttcagcctcatgttcttataaaattgttcttataaaaaaagcgagCAC TATGATTTTACAACATTGTGTTCTTTTATAGGAGCATTTGAAGACATGTG ATTTCGAATCTATTCAATGTCACTTGCGATGCGGAGAAGTTGTGTTACGC AAAAACGTAAGAGCGACAACCGTCTTTATAGGCAGAACTTAAATTAATTC ATCTTTTACTGAATTTTTACATGCAACATTCCTAAGTCTTATCTGGATTT TTAACCTCGGGATGTTCTCAATTTCTTCTTAAAATTGATAAAGAACTTTC CTTTTGAcacaaacaaaaattatttattgattaTCAGGTACAGCTCTTAC TTGCGTGGGCTAATCAATTTCATTGACATTGGACCCAATAAACTGTGAAG GGGCGAACTTTAAATGGATATAAATTTTGAACATTATATTTAAATTTTAG CTTATAAATCACTTGGATAAAGACTGCCCATTGATCTCAACGTGCGAGTA CAGCGATTTTGGGTGTCTTTTCAAggtaattttcgaaaatcaaatACTCG AGTCTGGCCCTTAGAAGTGAAGGCTTCCACAAACCATAAACCCTTACACA TTATTTCTAGAAGGTTATATACCTCTTAGGCAAGAAGATTCTATTTCCCC CCTATTTGAGGAACACTGCCCCCCGTAGCAAATGCCTCCCTTAAAAGACC CTCTTAGAAAACAGGAAACCAAATGAaccctttaaaatatttttgaaaat ctcatAACAAAACACCCCATGCTCCCCAGGCTAGTGGAGGTGATAAAAAC TATGTTACAGAGTCTATTAGTCGAAAAATGGAGCCTATTTTTGTGTTATA ATTATGTGTTatcttaaagaagaaaaatttttctcaaatgcGTTTTAGTT TCTGTAAAATCATCGAATCACGACGATGTATTAACTGTTTACTCGTTTCG AGTTTTCAGGGTACAAGAGACCAACTGTACAATCACATGTCACAAGCGAT CAATCAACATTTCTCCCTCGAAATGAAGCATGAAattaaaaacgtcaaaa aagaattcAGTGACAAATTACAAGAAAAAGATCTCAAAATTCAAGAGATA ACAAATGAGTTTGATGCCCAACTGAAGGAAAAAGATGACGAAATCAAACG ACTTAGAAAAGATGTCAAGGGCACTAAAAAGGATCTCCAACGAGCTTGCA ATGAAAACAATGAGAACCACAAAGCCAACGAAGAAACCAAAAAGCATTTC ACCCGAGTTATCAATGAAACTAAAACTGAACAACAAACAGCCATCGAAGA AACCAAAAAGGATTTCAACCGAGTTGTCGATGAAACTAAGATTGAACAAC AAAAAGCCATTGAAGAAACCAAAAAGGATTTCACCCGAGTTATTGATGAA ACCAAAACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAAGATTTCAC CCGAGTTATCGATAAAACCAAAACTGAACAACAAAAAGCCATCGAAGaaa ccaaaaataatttcaaccGAGTTATCGATGAAACCAAAATTGAACAACAG AAAGCCATTGAAGAAACCAAAAAGAATTTAACCCGAGTTATCGATGAAAC CAAAATTGAACAACAAAAAGCCATCGAAGAAACCAAGAAGGATTTCACCC GAGTTATCAATCAAAGCAAAACTGAACATCAGAAAGCCATCAAAGAAACC AAAAATGATTTCACCCGGGTTGTcaatcaaagaaaaactgaacaACAAAA AGCCATCGCAGAAACCAAAAAGGATTTCAACCGAGTTGTCGATGAAACTA AGATTGAACAACAAAAAGCCATCGAAGAAACCAAGAAGGATTTCACCCGA GTTATCAATCAAAGCAAAACTGAACAGCAGAAAGCCATCAAAGAAACCAA AAATGATTTCACCCGAGTTGTcaatcaaagaaaaactgaacaACAAAAAG CCATCGCAGAAACCAAAAAGGATTTCAACCGAGTTGTCGATGAAACTAAG ATTGAACAACAAAAAGCCATCGCAGAAACCAAAAAGGATTTCAACCGAGT TGTCGATGAAACTAAGATTGAACAACAAAAAGCCATTGAAAAAACCAAAA AGAATTTAACCCGAGTTATCGATGAAACCAAAATTGAACAACAAAAAGCC ATCGAAGAAACCAAGAAGGATTTCACCCGAGTTATCAATGAAACTAAAAC TGAACAACAAAAAGCTCTAAACAAATCAATGGAAAATCTGTCTATGATGC TTTATATTACGGATGAAAACACCAATGAATTTATAAGCGGATCACTGAGG CAAAAGAGTGATCATGTTCataatttaaacaaaaaactagCCGAAGAAAA CAAACTGACATTGCAGATTTTAAGCTTACCACAATGCCCTTATTCTTTCA CCATCGAGAATTTCAAAACTCAATTCGAAGAggctaaaaaaacaaataaa agaatttcCTCTCCAAACTTCCTCACGGTAAATGGATACTTAGGACGTCT AGGTATCTTTTTAAATGGGTTTAGAGATGCTCAAGACAATCACGTGTCAG TATACTTTCAGAATCTAAAAGGACCATATGATAATTCTTTGAAATGGCCA ATACCTTGGAAATCGCACATAATGACACTTCTTGTTAACAGCAGACAAAT CGGAAAGATGTCATACCAAAGTTCAAGTGATGGAGGTAAATGGAAAGATC ATTTCATACGACCGATTGATGATGGATGTAAAAGTATGGGATTTCCAAAA GCTTTTGATCGTAAATTGATAGACAATCTTACTGATGAAGACGTAGTAGC TATCAAGTACGGTATGGATTGTGAAGTTCAAGAGCATTGAGCTTGAATTC TGAAGAGCTAGAAAGGaatctagatttcaaaaaaagtacCGCgctaaaac aaaaagaaattattagATTCAATCAATCGTCCGATATGTAACGCAAATGT CAATCATAAACATGATCATATAAGATCCCAGTCGTTTTCGTTTTTAAACA ATGTAGTAGTAGTGATGCGGTAATGCGGTTAGGGTAATAGGGTAATGCGG TTTGGAATGTTTTGGCTGAATAGCCAGATATGAGCGTGGTATGCGCAGAA TTGATGACTATTTCGTGTACCATTTATATATTCGCACTGACAATCTTTAT AGTAAAGTTTgtaattttggtaaatttactcatttgattttattcatttt tttttttgttcttgcAATACCTTATcgaccttatcggccctttttaccaT TATTTTAGTGTATGTAATCACACGATAACGAGTGCTATTCAAGAATTATT TGcacaattgtttttttttgttattaattaacgagtgcaattttcgaatt atATGAGGTATCATGTGATTAcaagctaatcgcacaatgggtttcactac tttttccccgtttgaaaagtaaattacactgaaagttttatatttttctg ttctcctgatgtttttcttttattgctgtttatagattttattttcatca aattgaATTTGCTTTTGTAGGTACAAAAGCATGTAAAGATAGAttttaag caagaaaaaaatgtttatacCTGATGCCAGACAGCCAAATCCTTTGCTTT ATCTTTTTCATCGGGTAGAACATCCATCACGAGCGCGAAATCGACCGCTG AGTAAGCACCAAAACCAATTCCTGTAACAAGATAAACGTATTTCTTATAA ATATCAACAAGAGCTGCATATGTGTAGATAAATGTTTGTCAAcattacca gtggataccccttaaaaccacataccccttaaaacccacaatgttgcatt tttggctttcataactaccagatttaattttatgtggtaTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045690TCONS_00045690Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045690-proteinTCONS_00045690-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:582180..593171 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.98 1.06 0.49 0.48 0.46 0.45 4.21 4.01 2.43 3.19 2.21 1.82 5.83 5.18 7.11 6.39 2.88 2.76 5.82 4.83 3.18 2.96 1.96 3.08 5.19 7.18 2.25 2.58 4.39 4.1