XLOC_029144 (gene) - C. hemisphaerica

Overview
NameXLOC_029144
Unique NameXLOC_029144
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_1:192042..202114-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029144 ID=XLOC_029144|Name=XLOC_029144|organism=Clytia hemisphaerica|type=gene|length=10073bp|location=Sequence derived from alignment at scaffold_1:192042..202114- (Clytia hemisphaerica)
GTCTTGGTAATTCGTTATTGATCTGTAACTGTAAAGCTAATGGTCTTATA GACATAGATGTTTTTCGACTTCTGATAAGTCAAGATGGATATATTTCAGC CACTGATAATTGTAGATATTTTGTTTTTTTAATTTAGTAGAATTTGAAAT GGCAAAGTTACTAAATACTCTTACTATACATACAAAAGATGTTAACTGTT GTGCTTTCTCTGCAAATAGTAAGACCCTTGCATCCGTATCTGGTGATAAA ACAGTTCGATTATGGAATGCTGATTCAGCAACTGAACTCTCATATTCACC TTTAAACCATCATACATACAGTGTAACATGTTGTGCTTTTTCGCCGTTTG GATCAATGCTTGCAACAGGTTCACAAGATTACACTCTGGCTATTTGGAAT GCTGAAGATGGTGAACTGATCAAAACAATGCTTGGTCATAAAGGTGCTAT TCGGTGTTGTACATTCTCTTCAAATTCTATGTTGTTGGCAACCGCATCGA GTGACGAAACAATTGGAATATGGAATTTGAAGAACTACTCATTATCCAGA GTATTGAAAGGGCCAGATTCTTCCTTAATGACTTGTAGATTCACACCGGA TGATTTGTATCTTGTATCTGGGTCGGGGTATGGAGATGCGAGGATTTGGG ATATAAGTACTGGACAATGTGAAGGGATGGTAGAGGGCCATGATAGTGGA ACAAGTGGTTGTGGTATCACTGGATGTGATTTCTCCCTCAAGTTTGGATC AGCAGGTAATTACTAAGGAGATTACTCAATCATATAAATTTTTTTAAAGT AATCAGAAAAGTGAATAAGAGAAGAAGTTAAAACTCCTTATGGATTTTAC TTTTTTTATTGTGCATAGTTTTCTATAAGACCTGGTGAAGATCTAGCTGG GAGACCCGTCTACTGTTTGTGTGATTTCGAAGTGTAACATTTAGTTAAAA TGAATAATAATATAGAAATAACAGAGTGGCCGGGTACAAAATTCAAACCA AATGTAAACAAATTCAAACTGGGTCAAAAATACCATACTCTCGTGGTGTA AGTTTGAATAGAGAATATGGATCTCCAGACTAGTGAAGATCATTCTTTTG GATAGTTTGACAATTAAATTTTACTACTGAAATACAGACAGAAATGTATT ATATATAGCAACTATACTGTTGATATTTCAGATACAGCGCAAAGTCTTTC AAAAGTTGGTGAGTCCCCACGATTTCTTCTAGCAACATGCGGTGGCGATA ACTTGATCAAATTATGGCATGTCTACACTGCTTCTGGTAAGTAAATACAA CGTCCAGTCATTGATTAATTCCCCCTTTTTCCAACCTCTTAGTTCATATT GTCATTTTTTAGATATGACTGTTCTCCTGCAAAAATCATAATTATCCAGC CTAAATGAACAGTTGTTTTATGAAACTTGTGACTTTAATTTCATGTATTT TCTCACTCTCTACACCATAGCTTATTCAATGAAATGTAATTTTGAGTTCG TGGTCAGTTTGAAAGGACACGGTGGGCATGTTTATGATTGCAAATTCTCT CAAGATGGAAAAATGTTGGCTTCATGGTATGATAGGATTAATAAATCTTT CCAATAGAAAATGTTTTAAATGTATAATTGTAAAAATATTGGTCTTTTTT ATGTTCTTTTTTTTCTTTTTATTTAGCACTTTCAGTACTTCCTACCTTTC CTTGATGTCTTGATCTTCGCCCTAATATACATCTTTTTTGTATCTTTGAC AGCTACATCATTCTTAAAAATTTCAAAACGAATTCAAGGCTACATCTTTG CAATTCCTTTTTTAGCTCATCAGATAAGACTGTCATCTTATGGGACCCAG TAAGTACAAATACCATTTCATGATTGATAAACTTTTAAACGATCTAAAGG TCTACTTAGACTACATAATATATTGGTAATTCGTGATATGCACCATTGCA ATGTCTTCCACCGACCTATTGACTAATTGGTTGCAAGTGATGTATTGACT GATTTTACGTCACTTACAACCAATCAGTAATTGGGTCCGTGATGTAGTGT TAAAAGACATTGCAACAGTATGCACCATGAACATGGTTTGAGGAGTAAAC GACTGGTGCTCTCTAATGAAGTGGGATTTTCTTTCTATATACTACAGTAA CCTAAATATATTTGGAATATTTCAAATGTAGCTTGTGATATATTGTTGAC AACTTTTCAATATATTGTGAGCACTTTACAGCATTATTAATTGCCAGTAT GTCGCCTTACAATAGTAGTAATTTTAGCCGATTGGTAGTGTGAATGTTTC GCTCACAGACTTACACCACAATGGACTCTGTTCGAACCACAAGCACTTCC AGACAGTGTGTTAGAGAAAGGGACTCTCTTCCTTCACTCAAAGTAATTTA TCCCTTCACTCTANTCAGGCAGTGTGTTAGAGAAAGGGACTCTCTTCCTT CACTCAAAGTAATTTATCCCTTCACTCTAATGGGCTTATAAAGGCACACA CCTCTTTCCAAGAAAAACCCGAAGTCATGTTGCCATATTGTTTTATTTTT TGTATGTTTTAGGTTAAATATGAAATCATTGCAAAATTGACTGGCCATAC AAGGTATGCTAAGATTTCAATTATTTAGTCCATTTAATCTCAATCAGAAG TTTGAACTTCTAGCTGTAAAGCTAAGAAGTCTTTATATGAGCACGCATAC TTACTCTCTTATTTTTTACTTAATTGAAGGCCAACTTCTGACAAAAGGAA GTAACTGCATTTTTCTTATTTCGAGATAATTGCATAAACGAGTTGACCTT ATTCAAGATTAATGGTATCGTTTTAAGATAAAAACTTTTGCTGATTGTGA AAGACCAAACCCTAGAATAGTATAATATTTAAAAGGAAAGAGTTAAAAGG AGTTTAACATCTTGATATTGGAAAAATCTACACAAGTTTTACTCTACTCG GACTCTTTCAAGCTAAAAATTTTAAAGTTACTTCTTTTTGTCAGATAATA AACTGCAAAATATTACAAGCAATTTTCATTTTCAGGCTATAAAAAGAAGT AAGTGACTTACTTCCTTTTGTCAGAAAATAAAATGAAACTTTAGTCAAAA AAAAAATTGATAAAAAGAAGTCTTTTACTAGAAATAAACTACTGGAAAAC ACAAGCTGGACTCTTAGGAGTTGAGTTTTACAAGAATATGAATTTTCAAA AATTGATGGTTACTTCCTTTTGTCAGATCACGGCAGACTTTTTACCATGG AAAGCGCCCTATGTTTTAAGGGCTCTGACCATATAGTGAATTTTTAATAT TTGCCACATACAAAATATACATTTCTACTTGACGTAGCACACAAAACTGT GTCATGTTATACATTTTCTGTTAGGCCAATTATTCTTGAGCCTGAAAATT TAAGAATCGCAATTAAAAAATTTGATGAAGAAGAAAACGAAGACTTTTGC AAAGAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAAC ATTTTGAAAATTTTTTTGCGGCAGATGGTTTATCTTTTATAGAAGTAAAA TTATATTTTCGGAAAATTTTTCTAAAAGCTTATTTGCTTTAAAATCTTGA AAATAGTGCTTTTTGACCAATTTTCCATCCCAATTTTTCATAGAAAAACA GCCATAACTTTTGATGTATTAATTTAGAAAATTTTTCCGAAAAATTTAAA CAGTTCAATTCTTTGCGGACAGTTTGAAGAAACTTCGAAACAAAAAGATT AATTACCCATTAAAACTTGGCACTTTTTATAGAAGAAGGTGATGCAGCAT ATTATTAACGTTCATTAAAGTTCATAACGTCATTTTTGCAATTAAATTAT TAATTACTCTTAAGGGATTTGATTAAAAAGCAATTTATAAAGGCAATTCT TTGTTAAAAGTGTTAAAGAACCTAAAGCATAACTTTTATGTTCAAATACT TAAATCAATTTTCCGACTATGGTCAGAGCCCTTAAGTAGAGCGCGTTACA TAAATAACAGAGCATTCTTCTTGTTTTTTTTATAGATACATCACTACAGT ATGTTTTTCACCAGACGGGAAATATTTAGCATCAGGATCAAATGATAAGT CTGTTCAAATCTGGCAAATTGATGACATACGAAGGACTGAAAGCACTGGT GAGAACATTTTCATGCATTCAAGATAGGTTATCGATTTTATCACGCTCCT TACCAAGTATGAGTATACTCGTAGTAGAGTAGAGCCGTCAAATTACCAGC AGTATTTCAAAGATCCATGACTTTTGATACAGAAACTTTTGCTTGCTTTT CTAATACATTCTGAAATTAATACCAAGAGGTCAAATTTCCGATTTCTGCA AAGGGTAGTGGACGTGTAAAGTGATATTTTTATTTTCTGAAGTTTTCAAT TGAGTCTTGGAATAATTCTATTTTCACTTCATTGAATCTAAGGCAAGCAG TCAAACTACTTTTATTGATGTATAATGACTCCTACTTTTTATCCAGGGCG TCAAAATCCAACTCATGCTATTGGTAATTCACCAGCGGATCAAGTGAGTC ATTAGTCCCGAGGTTTTGAAATTTTGAAAATACTTTGGGCGATTTTTCGA CCTTGCGAAAGTTTCTGCCCGCGAAAGTTTATACGCCTAAAGTATATACA AATAAAACAAAAATTCTGTCTGTACAAAAGGGTATTAAAGATGACACTAC ATTGTATATTGCTTCAGGTGTAAAAAGCTTGAAAGTTTATGCTTGCGAAA AATTCTTGACAAAATAGAAAACCTGTCGAACTTCTAACTTAAACTAAAAT GTAAGATTTATGACACTTTTTAGCCTGTTATAGCCTCATAAGTCAGAAGA CAAAAGCTTTAATAGCGAAACTTTGTACGCCTAATTTAATCTGTATGTCG GTTCATTTTACTTTGATCTTTTCAGCCCAAACGGAAACTGATACGGAATT GGTCGATAGATGATGTTTGTGATTGGTTGAAAGAGTTGTCGCTCGATCAA TATTGTGAAGTGTTCCGCTACAATGCGATCGATGGGATCGAACTTGCACA ACTCACTGATCACACCCTCTTGAATGCGTTGCAAATTGGTAAGAAATTAT TATAGTATTGTTATCACCCTGAAATCGATTTAATTTTTTGCATGAATTAA TTACCTTCTTTACCTAATTAGTTTTTGCAGATTTTAGTCCACATTGTTTT GTTCAATTTTTTCTGCCTTTTTTGTTTACTAAAGCAGTTTAAAATAAAAG ACTTTTCTATTTCAACTAGCTACAGTATACAGACGTTTGAAATATTTTAT GACACTTTTCATATTCGTATAGGTCTTCTCTTCTTTTTGACGGAGGTTTT GAAATCCACATTAATATACATTTCCCTATTAATGATTTTGGTATACAAAA AGAAATCCTACAAAACATCTGCTTCAGAAAAAAATACAAGTCGGACAACC ATTTCTCAATGATCACAAGAACATTCAAAACTTTTGATACATTATGTACA GAGGCGATTCTATAGCCTCTGTACTACGCCCAGAAACCACCCTCCACACC CGTAACGCCCTCGTTACGGTTGAATGAACTTGAAAGTGTTTTGCTCTGCT CAGATCGCCTGATCTGGGAGTCTAGTTTCGGATAGGAAATGGAGTGGTGG GTTTCTGTGGTGTGTGTATAAGGTAAGACTTTTATGCAAATGTAAGATAT AGCCAGTACAGAAATACGTACAGTCTCCCCTTCTCTGTTTGATGTTTGGA TTAGTCCTCCACCCGTTAATAGTGTGGTGTCGACCAAGGCCTGGGCCGGC ATCACATTATTACAATTATATTACTCTTTCAACCACTCTTGTCAAGATAA CTCTAATCTTTGTTTTATCAATCTTTGACTCATTCAAGACGACCCAGATA TGTACTTATGTTCTTGTTTAGGTTCTTCAGTTTTTTCGTTTTTCTATTTC GAAAGAGTTTATTTGCTTTCTCATTTACTACTTTGTAAGAGAAATTCTTC ATTAACTTTCATCAAGAAACCTGTAACCTCCACCAAAACTCAATCGTTTA GAGTGTTCTTACACTGTTGTATATTGTTGGAGATGAAAATTCAAAGGATT TCTATTTCTAACTAGATATTAGATCATTCATGAGATCTCAACTGTCGTCT TGTTGATGTTGGTTAGCAACAGAATACTACTATTCTTAGCACATTAGACA TTTTTCATATTCAATAGAAATTGTGCAGCTCCTAGATTAAAATATTTTCG TTGGTATTAATGTGGCAGTCAGTGCGATGGAAGTTTTAACCCCTATTGGA ATACTCAACTTGTTCGTGATTCTCATCTCTGCATTTTTACACATCAATGT GTTGGTCTGTATCTACAAAAAGAAGAACTCGTCATTCGATATTATCTTGG CTAACGCGTATATCAATAACGTTTTCGTTTTGTTTATCATTGTTACCTCT TTTGTGTTATTTTTCATAAGGGTAGACTACCTCATAACTATTCTAGCTGA CCTGACCGTCGTTTTACTTATGTTCAATCACAACCAAAGCACTATTCAAG TCTTCTTGGTCATACAGTTATATTTAGCAACTCGTTTTCCACTGAAATTG AAAATTTGGATTACCAAACGGAAAACTCATATTGGAATCGTCATCATCTA TATCACCTTGTTGATTTTATACACGATAGCATTGCTGTGTTCTAGAATGA ACCTAATTAAGCTTGAATCTATTTTGTTTGTGGCATCAATTGCCATGTGT ATTAACTTTTGCGTGAGTCTCTCCACTTACGTCTACTTATGCACAATCTT CATTCACAAACATATTACTTTTGCCAAGAAAGAGAATAATGACCGTCGGA TGATGAAATATCGAAACACTTTTCTAATTATTGGAATGACTGTTGTTTTG AAAGTGATCAGCTATACACCAAGTGTCCTTTTTTATTTGAAGATCAATTT GGTAGTTGGTGAAGATTTCATTTTCCTTTTGAGCTTTATCGATCAAATTA TTTCACCTTTGCTCTATGTTTTTTACTATCAATAGTCATCAATACAACTG TTGTATATACCAATACCTAACAATATCTTCAATCTTAAACTTTTCCTGTG GAAGGAGGCTTTAGACGTGATTACGTGATGAAAATTAACATTGTAAACTA TATAGTTGAACCCCATAACAATAACAGTAACAAATCTCTGGTCTTCTTGT TTCAAACTAGAGTTTTTTAAGGAAAAAAGGTATGATAAGAATTAATACAT TTTATTAAGAAAATATTTGTTGAATGGATTGATTCGAGCCTATGAGAATT TTCTGAACTTTTGAAAATGAAGATGAAAATGAAGACTTTTAGGAAACATA ATTGCCTGAACTTTAGTTAGATAATTTTGTATAATATGATGTCCAACTTC CATTATTTTACAAAAGCGTGTATAATTCGAAGTGAAATGATAGTCCTTTC CATTGCAAACTCTCTCTAATTCGAAAAAATTTCTCTAAACAGAAAAAAAG TTTTGATCCCTTTAAAGACGAGTACATCCTTTTTTATCAGCATTTCTTCT ATAAGAATGTCAGGGTGAAAATTGGCCAAATCGTAAAAATACCCTAAAGA ATACCATCTAGGGTGAGTTTCACATATTTTAATAAGAATACAGTCATTTT ATGTTTGGTTAACAGAAAAAACAGGGTTTTTTATTAGACTGAAATTGAAT TTTTGAGGCAGAAATATAATTTTAGCTGTCAATGTATGGTTGGTTTTCGG TAGCAATATTCAATAAAAAAATATCCATTCAACAACAACAAATTTATATT CAACAATCTCATTTTTATATTTAAGAAGAAAAAAAATCATTCAAGAAAAG AAATATTCATTCAAGTAAAAGTTAATTACGATTCTAGAAGCATGGCTTTT TATATTCAACACTATTAAAATTTGTACGAGAAAATGAAATGAGGTTCAAG TCGCGGAGTGGATAGATCTTCATATAAGTTAGCATATTAGCGACATACCT ATAATAGTTGTAATAGAATATTAAAGTGTAATACGGTGTAATACTATGAT ACTGTAGCTTATTCTATCATATTATAGAAGAAAACTCTTTTTCACGCCAG GATTGGGAGAAAGCTACAATGCGAAAGGAAAGCTAAGCATCCACGAAAGA CCTTTTTCAATAGTCTGTCTGGAAAATTATATGTTCCCTAACATTGAGTA ACCTATTTTCCGGGTTCAAAAACCAAAATATTTGCTAAAAGAGAGTTATG GAGACTTTTTCCACAACAGCGCTTATTAGGGGAGAATTTACCAAACATTC ATATCTGTACCACTTTTCAACTTCAGTAGCCCTACCGGCCGTCAAGGTCA GTGCCCTCTTTAGCCAGGGGGCCACCTTCTTCTTGACATTTGATTTAGTA TTATACTAAAAATTGTTAGGGAGTTTGATATAACGAACCACTACGCTTAT ATTACGTACTTGAACAATGTCCTCAATATGTAGAACTATATGAAGACCAG GCCACTTAAAATCACTAGCACATATTTTTTCAAAACATGCATATATATTA TTTCTTGCACATATAATTATCATTCTTGGATAATTTTTTTATCTTGTTGA ACCAATTTTTAATCTCTTGAATATGAAAATGAAATTGTTGAATATAAATT TGCTTTTGTTGAATGAATATTTTTTTTGTTGAATATTGCTACCAAAAACC AACCATATCAATGTGACCTCAAAGTCTCAAACTCTCTAATTGATCATTTC TCATGTTTATATAAAAGTCAAGTCTAAAAAAGTTAGAATACTTTAAGAAT ATTTCACTCTCAATTTTGTTACTTTCTTAAGAATACTTGATTCTCATCCA AAATACATATTTATATAAAAAAAGGGTCAACATTACTTTGCAAACAAAAG CCTCTTTCAGCAGTATCAATTTATTTTCTTTTTTTAGGACCATTGGGCCA CCGTAATAAGATAACACGAGAATTGAACGAATTGAAGCGCATTGAAAGCG AGGGGAACATACCTGATGAATTTTTGTGCCCCATCACAAGAGAACTAATG GCTGATCCTGTACTTGTTGCTGGTATGTTAGATAAGAATTTCTTCGTCTA CGTCCAAATAAATTTTATTACAAGCCTGTAAAAGGGTCGTTTATGGGGTT TTATTAACCATCCAATTTTTCAGAAATATAGGCCAAACCCCGAAATTACA TGTGTCATTACAGGCTTGGGAAATAGACACTTCAGGTTGAATTTTCATGA ACGAATTTCAGAACATTGTAAAATGGTAAAAAATAAAAACTTTATAAACA CTCACTACTTAACTTCTCGCTTTCAGATGGTTTCACGTACGAGAGATCGT CCATTGCATCTTGGTTCGACTCTGGTAATATTACCAGTCCAATGACAAAT AAACCGTTGCCTAGCAACCAACTCGTTCCCAATCGTTCACTCAAGAATGC TATCATGAGATACTTTGGACCTGTTCCACTAATACCATGAGATATTTCGA AACGAGGTTGGAGTTTGAGAGGAGATTTCGCACTTTATTTTGCTAACAAA CGGATCGTTGATTACATTTACCGAGATGTAATACAAGTTCAGAGATAAGC CCAATGAAAGCCAACAATGACAAATATATGCAATATTTCAGTTAGTGCAG TACTTAACTGTTAAGCGTTTTAGCCCGGGCTACTACCCTTACCGATCGAC TGGTGTGTTCCGCTGAAGTTAAAAAAAACCGGGCGTTTTAGCTTCTAGTG CTATTCGTATATTCATGACTTGTACTGGAGAGTATTGAACGAAGTTACGA AAGATTTATGGATATGGATTGATATTTCTTGTACTTAAAATCGTACCATC GCTTAATTCAAGACTGATATTTTATCATCGAACCAATGTTTTGTAGAGCA CTTTTAATGAACAAAATGACAGATGTTTAAAAATGATTCAACTTTAGAAA TAATATGTAAATTATTTTAGTGTTCAAAATTTAAAAATCTTGTAATATAC TATATAAATATGAAAAATCAAATTGAAAAATGTAAATGTACAAAATAAAT TATAATTTTCAATAAAATTAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045583TCONS_00045583Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045583-proteinTCONS_00045583-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:192042..202114 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WDSUB1WD repeat, SAM and U-box domain-containing protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.91 7.17 2.62 2.05 7.45 6.42 7.77 8.05 7.1 7.58 7.31 6.95 7.36 8.13 4.73 5.95 7.67 10.33 8.39 6.86 11.65 11.31 9.49 9.82 10.08 10.28 5.3 3.93 7.56 7.37