XLOC_027181 (gene) - C. hemisphaerica

Overview
NameXLOC_027181
Unique NameXLOC_027181
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004281:1211..7494-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027181 ID=XLOC_027181|Name=XLOC_027181|organism=Clytia hemisphaerica|type=gene|length=6284bp|location=Sequence derived from alignment at sc0004281:1211..7494- (Clytia hemisphaerica)
TAAACATTTTTATTCGAATCGTCTGCGTCTGTTCGAAATCATCAAAAGTA AACAAATGCAAAAATCTATAAAGATGGCTTGTTGTTGGATCTTGGTCAGT TTTGATTTGTTTTCTTGACAAATTCGACAAATTTGATTACCCCCGTACCT CTTTATCATTGAATATCCACTTGGTTTTGCAAGGTGAGTTTAGTTCACTT AAAAGAGCACTTTTCCCGCCTGCGCGACCACCAAAAACTTCTCTTTATTG ATCTTATTTGATACTTGATGGTTACTTTTAAAAGTCAAGGAATGATGAAG ATCCTTTCTGTCATCTTTCAAACGATTTTTTTCCATTTAACAGCAAAATA AACATTTAAAACCGAAGAACCCATAGCATCAGCCCCCCCCCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGCTAAGAAATATTT TGGCCTTTAAAGAGCCTGAGGGCTAAAATTACCAAAATATTTGGGGGGAC CTGGATTGTTGGGGGGGACCTAGATGATCTGACTGAGACTCAGGGGGCTG TTCAGCTAATTTTAAAAGATCTCTTATCTTACTATTAAATCAAATATAGC TAAAAAGCAAAAGATTTGTAAACATAAATAATAATACAAGTAAAATTGAG TTTTCATTTTCAGTACTGTACTCGCATATATCTTTTATTGACTTCTCTAC AGGGGCGGGAGAACAATGTTTTTTTTTCCCAAGTGTTTAAGGGGACCTAG CACAAGGCAATTTTTTGGGGGGAGCTAAATTATTGGGGGGACCTTACTTT GTTGGGGGGACCTAGAAACCTGGCTGAAGCTATGGAACCACTGTTTAGAT GCGTGCCGCCCGCGCGGCAATTTGATCAACTTCAGATTTTAAGTCCGTGT TTCGGCTTCTGGTAATTTTTTTTGCTGTTCACTGCTAGGGTACACCATTT TAAAACGGCATTTTTCGCAGTCATAGCTACCAAACCGAGAAAATTTTCGT GGCTTTAACCCAAACCCTTTAAGGTCATTTTGATAAAATCATCGGTTTGA AGATGTGATTTATATAGCAAATTTTGGGCCAATTTTCGCTTGGGATAGAA GTTAAAGGTACACACAATGTAGCAAAACTGCTTCGCAAAAATAAGGGGTC ATAGACCTCTCAGAAAAAAGCGGTTCGGAAGATATGCCATTTTTTTTGGC TTAAAAAACAGCTCTTTCGGTAACAAATGTCTTAGGCTAAATGGGTAAGA GCTAACGAGTCTGCTAAATGACGCGCCTTACGCGCCCACGCGCCCTCATA TTTCTAACGCGCCTTCGCGCCTGACGCGCCTCAAAAATTTGACGCGCCCT ATGATTTCTACGCGCCTTGAAAATTTGACGCGCCCTAGAATTTCGACGCG CCTTGAAAATTTGACGCGCCCTAGAATTTCGCTGCCCCTTAAAAATTTGA CGCGCCCTATGATTTTGACGCGCCTTGAAAATTTGACGCGCCCTAAGATT TCGACACGCCTTAGGGCTTTGATGTGCCTTAAGTTTTCAACGGTTTTGAC GGACGGAATAATGGGACACCGGTCTAATCATACATGGTTGGTATATAAAA GAATGCCGGTGTTAGCAAAATGATCATTTCTTAAGAGATTAGCCTAAAGT CGACCCGTTCCATTCATCGGCTGTACACTTTATGTACGCTTTATTAGTCT ATTTCATAGAATTTGTACATGCTACACGTTATANGCAAAATGACCATTTC TTAAGAGATTATAGCCTAAAGTCGACCCGTTCCATTTATCGGCTGTACAC TTTATTAGTCTATTTCATAGAATTTTTGCATGCTATACGTTATATCTATT CAATTTACAGGGGAAAATGCACAAATTTGTCCCTTCACAGAAAACCCAAC TTTTTGTAATCATCTTTGACTTGGGAATTTTTGAAAAGGTTTCCATTGTC GCTGTCTTTGTTAAATGTACATCTCAATTTGGAAAAGAGTGATTTAAAAT AATAATTTGATTACTGCAGTGACGTAGAAAAAAATTATACGGCTAACGAT TTTCGCTCAATTGTTATCAGGGGGGGGTGAAGCAGTTAGTACAAGACATC ATGCCGGTTAGTACCGTGGTGGTGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTTTCTAAAATGTTGTTTTTTCCTATTGAAAGCTATGGAAAATTGAATCA TTTTTAAGATATTAAATTTTATTTGATTTGATTTTATTGAATTTATGAAG GCTTAAGGCTAAATTCAGTTAGTACTAACTGTACTAAGTGTACCAAGGTG GTGGTGTTACTAACTTCTTCCGAGAAAGCAGTTAGTAGGCATGATGTCTT GTACTAACTGCTTCACCCCCCCCTGTTGTTATAACCTTTTTATAACCATA ATTTGTTTTTCCAAAACTTGTTCTGCTCAAACGTATGAGCCAGTTTTCTA TGGTATGGTAAGACAAATTTTATCATTTACTTTTTTCAAATTTTTTTGAT TTGTATGTGACGTCATTTGACGTTCGAACTGCCTTTTGATTGGTCTTTTT TTTTCTCAAAATGGCAGAAAATATATTTTTGGGATGTTAGCTCCAACAAA GTAACATAAAATGATTTGTCTCAGCTTATTTATTTTTTGGATAAATCTGC TCTAAATTCCCAATCTCTTGCTACTGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTACTGCCTTGACAC TTTTGTGTCCTCCCGAGACAAACGTTTCTTCTACCAAAATAGGAAAGCCC TCAAATTTTCATAGGAAAATGAAAACTTTCATTTCGATTTAAGTTTGATG TGGTTCGACGATTGTGTCGGATTGATTCTACTTTTCTTTACCTTTCAGAA AATAACGAGGTTGTTTAATCAAAACACAGGCACCGTATGCTTCACTGCAC TCATTCAGTTACATCAAAATGCCTCGAAAATGTCAAAATGAAAATTGCGT AATCAGAGAACGTATGTCTCGCTCATTATAAAAAGGCCGATACAAACTCT CAATAATTGTAACATCGAGTTAAGTCTCTTTTGTTAAGTCACCAGGGGGT AAATAAAACAGACCTTGATACATTTATCGTTCGTTTCAACTTGACGATTC GTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTAAAATATGTACAAAGAAATTCATACTTTTCCAACC CGGCAAATCTTTAAAAAAGAAGCGAACAATAAAATATAATTACCCTTTCC AAATAAACCTCTTCAGTGGCGAGCGTAGTTTGACATCGCTCTGTGTATTT ACATTCGTTGTAATGTAATGTTGTTTGGGGAATTATGAAGTTCTTTGGAA TTTCGATTGCATTTATTCAGGTTGATTTTTTATGACTTCTAATGGTACTT TTTCTAACGAGTTTGATTACTCTGTTTTCACACGGGCGCACTTATGTCTT TTTTTTTGCGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAAGACA GGTAAGAAGGCATATTCTGCATATTGATGTAACTGTCATTATTGTTCATT TGAAATAATAGAGATGACATTTTCTTTAAAGAAAGTAATAAAAATTAAAA TCTTTTTTTTACAAATTAACAACCAAAGAGATTGTAAAAGCTCCAGCTTG TCCCATCCGATGGGATAGATATAGGATGGCCCGCGAGAATGGCCCGTGGG CGGGGTGAAGGCTTCTTCATAAAGACGAAAGACATGTATCTATTTTTCGG ATCCAGCATGCGGGAATAGTGTCAGGACCTGCAGGCGACCTGGTAGGGTT GGGCCCGATTTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAAAAA ACAGCTAAAAAACGGGTTTTTTGGACTTTCTGAAATATTGGATCATTGTT TTTTTCTGATATTTTGCTAGAAAGTAGGTAAAAGATTGCTCAAGCAGATT TTTGTAAAAAACGAATTTTTCAGCTCAAAAAACGCATCTTTATCTATAAG AATCACTATTAATAAGCGTACATCAATGTTCTTAGCCAAATTACTCAATT TTTCGATGAGATAGATGTTTGTTTTTGCTCACAAAGTCTTGAATATGAAA GAATATTTCAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTTATAAG AAACAAACAACTAATTTTGATAGATCGTCNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT CTGAATGATTGTTTAATGGTCACGTCACGTAGATATCAATTATAAATGTG TTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTTATTTATT GGTTTACAGATCCGCTAACGTTATTTTTGCCAAAACAAAAAAAAATAAAA TAGAGATTTAAAAAACTTTTATTTACTTTTTCTCCTCCGACCTTCAAAAA AGAAGAAATAAATGAAAAAAACAAACAAAAACACAGATGTGCCCTATTCT GCCAATGTAAAGATACTTTAATAATCCTTCCCTTAATGTCAGGGAACTTC CCCATGGAATTTCCCTATCCACAAAAAACAACTTCAAGAGTACATTTTTT CTGCAAATGTGCTAAGAAGGAGAGTTGTCAAGAGAGTCTTATTCAAAAAA CGATACTTAGGAAATTTCATAAAATTTTCTTTTATTATTTCCTCCAGTTT CAGATTTTGAAAAATAAAACAAAAAGAATTCAAACATCAATTTTATTTTT ATTTTTTTCCATTCTCCTGTTCAATACTTTTCCTCAAAATGTCTGTAAAC CAGAAAATAAAAAAGTAATTGCCTTAGCAAAGTAAAAAAAAAAAATTTTT CAGACACTTTGAGATTTGACCCAGCAACGATTTATATTATGAAAGGTTGA GGTTGTTGTTTCAGCTTTCTGTATTATAGTGGTTGCACAGTGTCCTCCCC TCCCCGTTTCCATTGGGGGAACTTTTTGAAAAACTAGAAAAGAGGGGGGA AATACTTTTTAAAATTTCAGGGGTCAAAGAGGGGGGGGTTAAATATGTCC AAAAAAAGCAGATCGTGAAGAAAATCTAATGTTCAATCTTGTCTGATGAA ATATTTGTTCAATAAAAAAGAGGGTTTGTAATTTACACTTGAAAGTTTTT TCTTTACAGGGACTCAAAGTGACTCTAAGGCTTTTTTAAGAGGGGGAACT AACCCTACAAGACACACTGGGTTGTTTTATTGTTCCAATTCTATTTTCAT TCCTTAAATTACAAACTATTTTAGCTTTTCCTTTTGCCTTTATTACAGTC CAAATTTATTAAATTTGAGCAAAAAGAATACTGTCACTGTCAACAGAATA AACAAAGACATTTTTCTCATCCTACAGACGATCAAAGATCATGTTTGAAG TAGAGATGGATGGTCATGAAAATGTGGAAATCGAAAGTGAAAGTGACTGG GATAGCGAGGGTGAAAATCCTTCTGAAAGTGAATTGGACAGTGACGTCGA AATCAAAAACTCACTTGCCACCTCTGCAGTAAGTTAAAATATAATAAAAA AGGTGTTAAAGTGATTTGACAGCATTGATAAAAGATAACAAAAGACTTAT CTTTTGCTTTGTTACGACATACAGATTTTTTTCCATTTTAGATGGATGGA TTTGGGAACTTGTTATCTTCAAATACAAAGAATAATGAAACCATAGATAT TATAAAAGAAATCCATTCAGCTCTTCTACTGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043485TCONS_00043485Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004281supercontigsc0004281:1211..7494 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.95 3.99 1.33 2.56 5.73 7.55 9.59 6.95 4.4 3.75 6.48 4 5.4 3.15 2.63 3.23 2.65 3.03 1.47 1 1.32 2.74 2.32 3.06 7.8 7.18 1.09 0.43 2.46 2.94