XLOC_026863 (gene) - C. hemisphaerica

Overview
NameXLOC_026863
Unique NameXLOC_026863
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003951:2918..8878-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026863 ID=XLOC_026863|Name=XLOC_026863|organism=Clytia hemisphaerica|type=gene|length=5961bp|location=Sequence derived from alignment at sc0003951:2918..8878- (Clytia hemisphaerica)
CTGGCTTGGACTGACTGGAAATTGTTTTTTAAATTCCATTACTGGATAAC
CCTTTTCTTTGCTCCTCTCATTGCTCTACTTTACGATAATATCTCACAAA
ACACAAATCCATGGCTACTTCCTCCTCTGAAACTGAAATTGGCCTTGGTC
AAAAGCGTAAGTCCACTTCAATATTGCTGTTGTCAGGTCTCGGTCAGAAG
TGTAGTCGTGGAACTGGTACTTGTGATAAGTGTTCTAAACAATACACTAA
TCGTTCTAAGCCCAAATTTTGCCAATGTGGAGCTCATCTTGGTGGAATGT
TTGTTGCTAAACCAAAAAAAAACAGAACCAGAGCCTGAGCTTGTGGAAAT
AGTTAACATTTCATCTGTTGGCACATTTATGTCTGCAAAGGTGTCAGTGG
CTGGAGACCGTGCTTTTTGTTTTATATCCACAGACAACTTATCTGTCTGC
CACAGCAAAACCTGCCTCAAGTTAAGGTCAAGCTATGTTTCTTCCAACAA
AGTAGAGGAATTTACCTGTGAACATTTACGCAAAATGCCAGCAAGACAAC
CAGTAAAAGTGTTTCACAAATTTGATGAAATAGACATCAATATGATAAAT
TTCTCTTTGGATATCAAGAATAAGATCAAAGAATTGCAAACCTCTATGGA
AGTCTACCCATCTGTAGTTCAAATAAGTAGCAAAGCCTATGCAGTCAAAA
CTATGGAGAACAAAACTTCTTGCCCAATGAAGTATGTTCATGTCATGATA
AAAAATAACAAGAAGACCAATAAGAATATGGTGAAGTGCACCCAGCGAAG
CTGTAATAAAAAAATTACAAAGACAAAACAGGTATCATTTTTAATTTTTT
TTCAAACCAATTTTAGTTTAGACTAGATGGATAGGCCATTCTTTAAAAAT
TGCTTGGTTCCCGTCATCTCAACTTTTAAAAAGTGGGTCGGACGGTCGAT
AAAAAAAATGTGTTCAAAAGATATGAAGAGGGGAGTCGGGCGGGATTAAA
AAATGAGCGTTTATGTCCTCTTCCGCCATCTTGTTGAACCTACCTGGAGG
TCCTATAAATTAACCTGTGTTTGTTTGTTTGTTCGCCTGTTACCTTTTCT
GTTAACTTTTCGCAGGATTGAATCTAGGAATCTTTTCAGTTTTGGTACGA
ATGTGCGAAATGGCGGTGGGCAAAATGTGACGGAGCTCAATTTTCAAAAA
AAATTTTTTGGCAAATTTGGGCCAAAAACCTGCTAAAAATAGGGTTTTAT
GCACTTTGTGAAAAATTAGATCAAAAAACGCATGTTTGTCAATAAGAATC
ACTATTAATAAGCATACATCAAAGTTCTTAGCCAATTAGTCAATTTTTTT
TATGAGATAGATGTTGTTTTGCTGATGATTGCTTACTTTTGAAGAATATT
TTGTGTTTAAACTTGAAATTTTGGCTGCTAAACGTGTTTTTATAGAAAAA
TTAGCCAAATTAGATATTCTTTTATAAGTACATTGACAATTATTTAGTCA
TTACAGTAACTTCTCTTGAGATTGGTTATTTCATCTTTTATTATTTTTTG
CACAGAGCTGCATAACTATAAATCCTCCAATGTGACAGATTTTCGTAAAA
AAATTTTTTGGTTTAAATTTCGGCTAAAAAGAGGGTTTATTGGTCTTTGT
GAAATATTGGATCATTAATTTTTTTGCATGAAAGTAGGGTACCATCATAT
ATCATAATATTTTAACAAAAATAACTTTGTTTATTCAAACAATCTAACAT
AACTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTGAAAGTAAAATGGAATCTCTACTGAGCAGAT
TAGATACGGTATTTCAATATTTCAAGAAATTCAATTCTGGAAATAGTAAA
TGTTTGTTTTGAATTACCCAAGTAAGCTCTCAGCATTCTCTCCTATCACT
TGTTCTGCTCCTACACAAACCACAAAAAATGTAAAGAAAATGTAGAAGCA
GGAATCAAGAGCCACCCAGTCTGATCCAGTAAAGTGCCAAGAAAATTGAA
AAGGTTCAGGCTGAAAAAAAAGAAATTAAGTGTCTGAGAGTTTCTCTTCT
TATATTTTCCAGTCAGCTCATCCAACCTATGGTAACCTGATAACAGATGT
TTGTAATTTTCTTACGCGCACGGTAAACCTCTGAAGGCGCTTGAAAATTG
TTTTCACACATCCCTTTAGAGCTTCAGCGTGGTGTGCAGAAAACATTCAC
AATCTGATCTCAGGTTAACCTATGGAGAATTGCAATATATTGTNCTGCTA
AGAAAATTGAAAAGTTTCAGGCTGAAAAAAAGAAATCAAGTGTCTGAGAG
TTTCTCTTCTTATATTTTCCAGTCAGCTCATCCAACCTATGGAGAATTGC
AATATATTGTTGAGTTACTCTACAATGGTTATTATGGTTTTGAAGCCCTT
ACCAAAAGAGATTTGAATGATGTTATTTGTGGACTTTGTGGAATTGCAGG
GAAGATTTATTATGGTGATGGAAAGGAAAAAAAAGTTGTACTATGATGAA
TGTAAGTAGAATTAATTAGGTTCTAAAAAATCTAAGTTATTAAATTTTGT
GTTCCTGGTTTCACATCAGATATGTCTGCCCTTTTGTTACCTATGTTATC
AACTAAAAAAAGTGAAAATATTGAAATATTGATTCTAGAGCAAAAAACCT
TCCTGTTGCTCAAAAGTAAATTTAGAAGGAGGAAAGGATTTTTGAGAACA
ATCAGAAAGAGAGGAGTTCTTTCCTTTGTAACCTAGTTGATTAAGCAAGC
ATAAAAAGAAATAAAGGCCTGTTCTATGGATCACTCCATTGTACATCTTT
CGATTTTTTCAATTCCCTGAACTTTATTTTTGACCTATTTCTGCAGTCTT
AATAATACACTCCTAACAATACTATACCGCTTCTGTTTTAAAGAAGGGGA
AATCATTGCTGTCTATTATTAGGAAAGTATGTATCCAAGAGGGAAGTATT
TTTAATTTTTAGATCAATATCAAAGAAAGCTAAAAAAATGCCCCAACTCA
AGAAATNAATTTTTAGATCAATATCAAGGAAAGCTCAAAAAATGCCCCAA
CTCAAGAAACCCAGGTCCAGGATATTGAGGAGGATGCTGTATCAGAGAAT
GATGAAAGTAAACTTGATTTGTGTTTGGATCGCATTGAAAATCAACTGAT
AGAGAGGTGTATTTATGTTTCAAAAAGAAATGAAACACTTACAATGAATA
TTGAGGATGTCCCCCTTCTTATACCATCATTACAAAGGAAGCAGGAACTG
AATACAGAGATGAAAAAAAAGCTGCTATCTGAAAGATACTGATAAAATTG
ANAGCAGCTGGAATTTGACAAACTTGTGAAGCCATGTAGCTATGATTGTA
TTTTTCTAGGACTATTCAATGTGTGTAACAAGATAATCATTTCATTGGAT
ATATTAAATGAATGGAGAAGTGAATTCAAGCGAGGGTTGAAAGTAAAATG
GAATCTCTACTGAGCAGATTAGATACGGTATTTCAATATTTCAAGAAATT
CAATTCTGGAAATAGTTAATGTTTGTTTTGAATTACCCAAGTAAGCTCCC
AGTATTCTCTCCTATCACTTGTTTTGCTCCTACACAAACCACAAAAAAAT
ATAAAGAAAATGTAGAAGCAGGAATCAAGAGCCACCCAGTCTGACCCAGT
AAAGTGCTAAGAAAATTGAAAAGGTTCAGGCTGAAAAAAAGAAATCAAGT
GTCTGAGAGTTTCTCTTCTTATATTTTCCAGTCAGCTCATCCAACCTATG
GAGAATTGCAATATATTGTTGACTTACTCTACAATGGTTATTATGGTTTT
GAAGCCCTTACCAAAAGAGATTTGAATGGTGTTATTTGTGGACTTAGTGG
AATTGCAGGGAAGATTTATTATGGTGATGGAAATGAAAAAAATTGTTGTA
CTATGATGAATGTAAGTAGAATTAATTAGGTTCTAAAAAATCTAAGTTAT
TAAATTTTGTGTTGCTGGTTTCACATCAGATATGTCTGCCCTTTTGTTAC
CTATGTTATCAACTAAAAAAAGTGAAAATCTTGATTCAAGAGCGCAAAAC
CTTTCTGTTGCTCAAAAGTAAATTTAGAAGGAGGAAAGGATTTTTTGAGA
ACAATCAGAAAGAGAGCAGTTCTTTCCTTTGTAACCTATTTGATTGAGCA
AGCATAAAAAGAAATAAAGGCCTGTTCTATGGAACACTCCATTGTACATC
TTTCGATTTTTTCAATTCTCTAAACTTTATTTTTGCCCTACTTCTGCAGT
CTTAATAATACACTCCTAACAATACTCTACAGCTTCTGTTTTATAGAAGG
GGAAATCATTGCTGTCTATCATTAGGAAAGTATGTATCCAAGAGGGAAGT
ATTTTTAATTTTTAGATCAATATCAAGGAAAGCTCAAAAAATGCCCCAAC
TCAAGAAACCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043138TCONS_00043138Clytia hemisphaericatranscript
TCONS_00043137TCONS_00043137Clytia hemisphaericatranscript
TCONS_00043136TCONS_00043136Clytia hemisphaericatranscript
TCONS_00043135TCONS_00043135Clytia hemisphaericatranscript
TCONS_00043134TCONS_00043134Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043137-proteinTCONS_00043137-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003951supercontigsc0003951:2918..8878 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.09	1.54	0.65	1.02	10.76	14.75	10.08	9.86	9.08	7.74	7.91	4.65	6.55	10.04	1.35	1.3	1.09	2.02	1.6	0.87	1.18	0.76	0.78	0.85	6.04	9.23	0.95	0.64	0.5	0.84