XLOC_026305 (gene) - C. hemisphaerica

Overview
NameXLOC_026305
Unique NameXLOC_026305
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003445:6542..11757+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026305 ID=XLOC_026305|Name=XLOC_026305|organism=Clytia hemisphaerica|type=gene|length=5216bp|location=Sequence derived from alignment at sc0003445:6542..11757+ (Clytia hemisphaerica)
TAGGGTATGTCATCTTCTTTACCAATCTGCTTCGATTCAAGAAAGTTGGA AACAAGAAGATACCTAAGAGCACTATATATATGAATGCCGTCAATATGAT TTTAAAGGAgggataaaatttatttttagccTTATTGTGGCTAATTTGAC TAATTGGATCCTTTAAtaagtaaaaagttgaaatcttCCTATTTTCCCAA TCCTTGCAGAGACTTTCAGATACCAAAAtggcacccttaagggcggttCA TACCCATACACTTGCCTAGCTATCTCCCGGGCTTTAAAAAGGGATTCAAG CATCACTGGTGGGCCTGGTGTGTTATGTTGTGgcttttaaagatttaaat tgTTAATAGTATTTAATATTTATTCTGAATATTTTACTTGCAAATAAAAA TCATACAACGCTTTTTTAAAtgagaatagtgtactttggatgagggtcaa gtattcttaagaaattgctaaaattgagggtgaaatattcttaacttatt cttacgtttttagacttgacttctttacaaacatgagaaataatcaatct gagagttttggacttttgagtgaacatttgggttaaaattaaaTTGCTTC CTCAAGGTTCAATTTATTTCTAACCAGANAAATAATCAAtctgagagttt tggacttttgagtgaacatttgggttaaaattaaaTTGCTTCCTCAAGGT TCAATTTATTTCTAACCAGactccgtataaaaaaccctggtctggaagct tattgttttaactttttgttagctttttcctttgttaatatcaaaagata gaAATCGACTTGCTCAGtatttgatcacgttaccaaatactcctcttggg attggtttaagatttaatcacgtgatcaaaaaatgagcaaaacaaactaa tttctcaacacaagttcaagtaagtaacaatggaaagaaacaaaaggctt ccagaccagggttttttatacggactatgctctaacaaaggaagcagttt ttctcatcctagagggtattcttacgatttggccaattttcaccctgata ctctcatagaagatattcttataaaaaaagcgtgtatttattTTTCAGCA GAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGGATATCCCGTTG TTATTAGGTGATGGGTTTGaagaaaaagttgagaacaCCTTTGCAGATGT ACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGGTAAGTAACGCT CTGCTGTGGGCCACGGGCTGTACATTATTAACGTTTCTTAAACGATACAA TTATGGATATTCCGAGCTTTAAGTTCAAGGCAAAAAGTATTAAGATTACG TAAGGCATAATCgagaaaaagagaaagacgAGTATAACTTATAATTAACA AAGGAGCTCTACACAATTCCGAAGAATCAACCTTTGAAAGTACTTACGCT AAAAGTACTCTCACTAATCTGAACTCGAAGATGGAGTcaaacttgtttga gttaaaTGAAATTGGGTAATTAAATTTCTATTATAGATAATAGACGAAAC ACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGCTTCCATAAA GTTTTATCATCTCCCTGAAGCGTCGGAGaggccaaaattcaaaaatctcg aTTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGGTATtcaatct tattacttttagaTACAATagtgtcaaaaaaaaacaagaatctTGGTCAA ACGTTAAAAAATCTTTCTATTGATTTACCCAAACCAATTTGACAATCTtt ttacttttgccagaaagcaAAATATAGATTTAGCTCCCAAAGCTATACAG GTCTGCATTTTTGacgatttctaaaaaattattttcaacaacACTCTTAA TCCTTCAAGCATCTCGTCAAGCACTTAAaacgaaaaacttttttaataac ttttgaaatatttatccaattgACAAGTTTGTCAGTATGCACCAAATATG GATTGACATAATTGGTAAAAATCTCtgtattaccttatcggccaaaatta GTCGGCCTCAATTTTAGTCGCCccaaaattttagtcggccctaattttag ttaccgagccaaaatttagtcacttagagCCGagtaagttttggccgata aggtataaaaAACTTCATCGtcacttgatgacgtcatctattttactaaa ttttgtgatataccttatcggggggaAGAAACTCGGGGATAAGTGACTAA TTATCTAATTAACTAATTAAGTAactaattaaaattaaaattttccccga cTCAAAAAAATACCGGCTTTTTTTTCCTCGATAAGGTAGTGTTCTCGTCT CCTGATTCACCCTTGCGTTTCTGTAGCTTATACATAGATGATGTTCTTTA CCTGTTATAAATTGCTTTAATCTCAGGTTATCCGAAGATCTGTATTGACG ACAAAGGAAAGATAAAGGCGGCGTCAATACAGATCAATCAAACTGAAGAG GAGCTTAATGAATTTTTCGTACAAAACTTTCCAAATTTGAGGCGGTCAcc gatatatttttttaaaatcggCAACCATGGAAAATATGTGCCCCTCCAGA TCAAAACCCCTCAAGACTTGAGAAATTTAGCAAAAGACGGGAAACGCTAC CAAGGCATTGTTATTGTTACGAATCACGACCTTAGTCAAGGTTAGTTTAA TGACAATCTTATTTTTTCCCTTTCCTTGTAGCAACTAATGATTCTTACat ctcgttgaaaagataattcagagcactataatttccgagaaaaattatta aaaaaaaatgaaaatgaagatgaaaaatgaagaaaaaaaaaagaaatttt tatcctttgGTGCTagaaacttaatttttggtGCATAAGTACTTATGAAG CCTCCTGATAATCctggttttaaaattttcgcgagcATTAAATAATTCGT TAATCTTCGAAATACTGGCAGGGGTAATATAATTCTCGCGTAAATTAAGT AgccaacaaaactatgacatGNagaaaaattttttaaacgacttgaaact ttttgacttttaagaaaatcttattaagcgtacttgtgcaaaattttaag ttcatagatggtccagatcaggttttatgactttattgtgaaacatgact tAAAACCCAGCTAACATCgcttttaaaactcaaaatcttaaagtgctgat aacttctgaactatttattcaatcattgtcAAACATTGACAATataagtt taaaaaattaaaaatcaaaaaaatcaaaatgatgacgtcatcatttatga cgtcatcaaattttgaaagttttactcATCTTCATCACATATTTTAAGAA AGAATCTTcatgaaaaatgcaaaaccggcaattatgttaaagggCAACCT TTTATCTTCAGAATCTTTAAtcagaatctaaatatctttattggttcgac tatAATAGACATCTTCCTGGAAATTTATGTCATAACTTTCCTAGATCAAT AATAaccgagggtggtagattctacccctccctggggatacaaaaatcaa aaaaacttggggctaatagggttaagaaaatttttccgcaAACTTTCAAA CAGTTCAATCCCtggttcaattctttgcggaaaatctgaaaaaatcgaaa caaaaaggcTAATTACTCATTAAAACTTAGAAtcttttgtaaaagagggt attatgacgttttattaacgtctttttaaagttcataacgtcatttttgt aattaaattcttaattactcttcaCATAGTAAATTAGCAAACAATTTGCG AAGGTAGTTTTATGTTAAAAATGTCAAGGAACctgaaacaaaagttttat cttcaaatcagGCATAACcgattttctgactatggtcagagcccttaatc cTCTTACAGTAAGGTACAACTATTTTTCGCGCAAAGTTCATGAAATTTCT AGCACCAAAGGATTTTTTGAATTACTTTTCTCGGAAATTAAAgtatattt caaattagctgtcagtaaaatttgaaatgctcataacttttgatatactT TCAGCTAGATAGCAAATATATGCGCATTGAAAAGATACTTGTGAGCACGG AATTCCGTGTTATAAAGGTGTTTCTcgttataaagaaaaacagcgtgtaa ggaatttaaaaaaatcaaacattgcAGTGATCCGCAAGCTAGTATTTCAA ATAACGCCCAAGATGGGATACTCGTGGTACCTGATAAAATTTTCTACTTA ATggtgtaaaaaaataaatttcagtgTGTAAATTTCACCCTCTCAAACAA ATATACCTATTTTCAATTTAGGCGTTNACTCGTGGTACCTGATAAAATTT TCTACTTAATggtgtaaaaaaataaatttcagtgTGTGTCTATTACACCC TCTCAAACAAATATACCTATTTTCAATTTAGGCGTTCTTTCAGATAGTCA AATGAaagaacagaaagaaagaaaacaagtAAAGATAGAGACACAAGATA CAAGTAATGAAACAAGCTTATTTCTCGAGTGTTTTCTTTAACTTGCACGT CGACAAGGACTTGCCGGGAGTTCGAAAACGAATCttgtcaaatctttgtt ttaaaaagaatagCACCCAACTTGCAaagtttttaataattttatcaaaa agaagaaaaagtcgAACGTGTGTGCATTTTTCCAACTATTTGGGGGGGAG GTCTCCAATCGAGTTCATAGTCTTACCagtcctcaaaaatcaaaattttg cttttcatttcaaataatttcaaatttactttttttagattcatCTGAAT TGATAAAAGATACATTCATACCGATACCAAGACCCCGTCCCCCACAGAAA CGTCCCGAAATGAACAGCGGTCCATTTCTCCCACGTTATGGTGGAGTAAT ACACAATTTCACGCTGATAAACACGTGCCCTCTTGATACATGGTTCAGTA TTTTGATATATATTAACTCGACACACCCAGGATTCATCGACGATATACCA AAGTCAAAAGAATTCCAACGACTTTGGTCGTATATTACTGTTGGTGAATT TACTGGCGCAAAGCTCAACGTCGCCAAAGACATGAATTTACAAGCAAACC TACGAAAGACAATATCCTTCTTTTTTAGTGAGGTGGAAATCGTTTACCGA CCCTATCTGTGCGATTACATGTCGTGTAACATGGTATCCACCTGTACTAA CACATCATGCAGAATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042472TCONS_00042472Clytia hemisphaericatranscript
TCONS_00042473TCONS_00042473Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042472-proteinTCONS_00042472-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003445supercontigsc0003445:6542..11757 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.12 0 0 0.49 0.52 0.3 0.68 0.46 0.43 0 0.71 0.31 0.32 0.57 1.02 0.75 1.07 0.81 0.67 0.59 0.52 0.51 0.79 0.08 1.07 0.67 0.49 0.37 0.5