XLOC_025605 (gene) - C. hemisphaerica

Overview
NameXLOC_025605
Unique NameXLOC_025605
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002965:11513..15446-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025605 ID=XLOC_025605|Name=XLOC_025605|organism=Clytia hemisphaerica|type=gene|length=3934bp|location=Sequence derived from alignment at sc0002965:11513..15446- (Clytia hemisphaerica)
TCATTAATTTACGTTACACGGTTTTTACCCATTAGGTTCAATAAAAAGAA
ATAAATACCCCAATTGCAGCAATCTGCAAGTGCCAATGCACGGTAGGCAA
GATCTGCTATTTTACCTAATATGCATAGTAAATTTTGTCTGCTCGTACGT
TGTTTTGGTATGTTACTTTTTTCTCTAGTACCCACTACAAAACAAGACAT
ACATCTAGTAACTGTAAATGTGGTCAGTTTGTTTTATGTTTCAGTGAATT
ACAAAGAATGCATGAACGCACAAAACGGACCTCGTGAAATAGTTGAGGCG
AGTGTCAGGACTTCATTCTTTATATTGAAGCAATTTTTTTGAATTAAAAC
AGTACAAAGAAGGCATGATTGCACAACGGACCTCAATTAAGTTGAGATGA
GTGTCAGATCTTCGGTCTTTGTTTCCCAACCCCCAATTTTTTTACCGAAA
AACTGATCATTAATTTACGTTACACGGTTTTTACCCATTAGGTTCAATAA
AAAGAAATAAATACCCCAATTGCAGCAATCTGCAAGTGCCAATGTACGGT
AGGCAAGATCTGCTATTATACCTAATATGCATAGTAAATTTTGTCTGCTC
GTACGTTGTTTTGGTATGTTACTTTTTTCTCTAGTACCCACTACAAAACA
AGACATACATCTAGTAACTGTAAATGTGGTCAGTTTGTTTTATGTTTCAG
TGAATTACAAAGAATGCATGAACGCACAAAACGGACCTCGTGAAATAGTT
GAGGCGAGTGTCAGGACTTCATTCTTTATATTGAAGCAATTTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAC
AGTACAAAGAAGGCATGATTGCACAACGGACCTCAATTAAGTTGAGATGA
GTGTCAGATCTTCAGTCTTTGTTTCCCAACCCCCAATTTGTTACTGAAAA
ACTGATCATTAAGTTACATTATATACATGGTTTTACCCATTAAGTTCAGA
TACCTTTTTGATCAAAAGAAATTAAACACCCTTTATTATGAAAACCTGAA
AAATTTGTTAGTATGACATGGTTGATAACATTGCCTGGAAATATTGGGGA
AAATTAAACAATTCTTCAATTGCAGATTGGCATTGTAGGCAAAGTCTGCT
ATCTTACCTAATATGCATAGTAAATTTTGCCTGCTGGTACGTTGTTTTGG
TATGTTACTCTTTTCTCTGATACCCACTAATAAACAAGACATAAATCTTG
TAACTGTAAATGTGGTCAGTTTGTTTAATTGTTTCAGTGAATTACAAAGA
ATGCATGAACACACAAAACGGACCTCGTGAAATAGTTGAGGCGAGTGTCA
GGACTTCATTCTTTATATTGAAGCAATTTTTTTGAATTAAAACAGTACAA
AGAAGGCATGATTGCACAACGGACCTCAAATAAGTTGAGATGAGTGTCAG
ATCTTCAGTCTTTGTTTCCCAACCCCCAATTTTTTACCGAAAAACTGATC
ATTAATTTACATTACACGGTTTTTACCCATTAGGTTCAGATACATTTTTG
ATAAAAGGAAATAAATACCCCAATTGCAGATTATTGGCATGGTAGGCAAA
TAAATTTTATCTGCTGGTACCTTGTTTTGGTATGTTACTTTCTTCTCTAG
TACCCACTACAAAACAAGACATACATCTAGTAACTGTAAATGTGGTCAGT
TTGTTTTATTGTTTCAGTGAATTACAAAGAATGCATGAACGCACAAAACG
GACCTCGTGAAATAGTTGAGGCGAGTGTCAGGACTTCATTCTTTATATTG
AAGCAAATTTTTTGAATTAAAACAGTACAAAGAAGGCATGATTGCACAAC
GGACCTCAAATAAGTTGAGATGAGTGTCAGATCTTCAGTCTTTGTTTCCC
AACCCCCAATTTTTTACCGAAAAACTGATCATTAATTTACATTACACGGT
TTTTACCCATTAGGATCAGATACATTTTTTATCAAAAGAAATTAAACACC
CCAATTGCAGATTGGTATGGTAGGCAAATATAAATTTTGCCTGCTGGTAC
GTTGTTTTGGTATGTTACTCTTTTCTCTGGTACCCACTACAAAACAAGAC
AGATCTAGTAACTGTAAATGTGGTCAGTTTGTTTTATTGTTTCAGTGAAT
TACAAAGAATGCATGAACGCACAAAACGGACCTCGTNTTTTTGATCAAAA
GAAATTAAACACCCTTTATTATGAAAACCTGAAAAATTTGTTAGTATGAC
ATGGTTGATAACATTGCCTGGAAATATTGGGGAAAATTAAACAATTCTTC
AATTGCAGATTGGCATTGTAGGCAAAGTCTGCTATCTTACCTAATATGCA
TAGTAAATTTTGCCTGCTGGTACGTTGTTTTGGTATGTTACTCTTTTCTC
TGATACCCACTAATAAACAAGACATAAATCTTGTAACTGTAAATGTGGTC
AGTTTGTTTAACTGTTTCAGTGAATTACAAAGAATGCATGAACGCACAAA
ACGGACCTCGTGAAATAGTTGAGGCGAGTGTCAGGACTTCATTCTTTATA
TTGAAGCAATTTTTTTTAATTAAAACAGTACAAAGAAGGCATGATTGCAC
AACGGACCTCAATTAAGTTGAGATGAGTGTCAGATCTTCAGTCTTTGTTT
CCCAACTCCCAATTTTGTACCGAAAAACTGATCATTAATTTACAATAAGT
GCAGATACCTTTTTGATCAAAAGAAATTAAACACACTTTACTATGAAAAC
TACCTTAAAAAGGAATGAAATCACTCTCTGCAAAGATCAGGAGTGTGAAT
ATGATTAAATACTTAGTGCGCAGCAAAACATACGGTTTTCATTTAAAGCT
ACGATATTTAGAATTTTTTACTGTTTGTAATGGTTTTTTCTATTGATTTT
AGAAGAACGACTAACAGCTTGGCCTGAATTGGGCTTTTTAAAAAAAAATT
TATACAGGCGTATTGACGAACTTTTTCAGTAACCCCCCTGGAAATTTTGA
ATAACAAGTTATCCCCTGGAAATTAGGGGGTAGACCCCTCTGGGAAGTGA
AATCTTGTGAAAAAGGGGCTGGAAAACAACTATTGATGTCAGTTTATGAA
GAGAGAACCCCCTGGAAACCTTCAATAACCCCAATGAACAACCTTCAATG
AACAAAAACCCCTTGGAAATAGCCCATTTTTCCCGCATACATGACCCAAA
CTGGCCGCCTATGTCCACAACATGTTTTTGAAAGCGAAAATGTAAAATTT
TGGTGGCCAAAGATTGGCCAATACAGTGGAACTGTATTGACTACATTGCA
GAATTCTTAAACAATGAGAAAAGTCCTCAGAAGTCCTTTTTGAACTGCAA
AAATATAACTGTGATTGTAATGCTTTTTAATCATTGGCATAGCAAGATCA
TAGTGGAATCAGGGGAAATTTCACAAAGACGATATGAGATACAGTTCAAA
AATATTACAAGGAAAAGAAATATTAATAAACTTACAACACTCCAACTGTT
GATATCTTGTTTCTTTTACACAACAACTGCTTCTTTCTGTAAATCTCTGC
TTTTGTCAGCTTCCACTTTTCGCTCTGAATTTTAAATTCGTGAGAACTTT
TCGGCACATGTGCAGAAATGAAATATTATTATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041679TCONS_00041679Clytia hemisphaericatranscript
TCONS_00041678TCONS_00041678Clytia hemisphaericatranscript
TCONS_00041677TCONS_00041677Clytia hemisphaericatranscript
TCONS_00041676TCONS_00041676Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002965supercontigsc0002965:11513..15446 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.14	0.76	0.97	2.32	4.57	3.45	3.27	1.55	1.95	0.88	1.14	3.01	1.69	1.08	2.25	1.3	2.1	3.24	1.14	0.72	2.63	4.04	0.15	2.56	2.11	5.14	2.68	1.02	2.1	0.57