XLOC_025537 (gene) - C. hemisphaerica

Overview
NameXLOC_025537
Unique NameXLOC_025537
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002931:288..5648-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025537 ID=XLOC_025537|Name=XLOC_025537|organism=Clytia hemisphaerica|type=gene|length=5361bp|location=Sequence derived from alignment at sc0002931:288..5648- (Clytia hemisphaerica)
TTCTAAAACAATGGAAAGACAATAGTTCGCTCTCCACCGTTTTATTTGAT
GTTTATCCAGAGTTCTATGATAAATCCATGCTTATAGGGGAATGTCAAGG
AACTGCGACAGTGACCCGACGACCAGAAAACAGCCATGTGTTTCCATACA
TTATGTCCTTAGAAAATATTCCTTTTGTTTGTTTTTTTGGAACTCGTAGA
TCATAAATAAATTTTGTCTTCTTTTCCCTTTGCAGACGTCACCGTCCTTT
GATCTGTCAATTGTACCGTTTGAACACTGATACAGATGTTGAAAGCTCAT
CGGAAGTCGAAGGACAAACAACATACAATCCTTCGTTTGAGGGCAAGCAG
TCAAGCTCCGCCCAGTCCAGTCAAGCTACCAATATTCAAGTGTCCTCTCC
TCTACATCAGATCCACCCTCGCCGCCCACTGGGTAACCTCCGGAACATAC
CATCTTGGAATCGAATCGGATCCAGCTTTCTATCAAATCCCCCAAACAAC
AACAGCTGACTTCCTTCTTCTCACTTGGCATTATGTTTTGGTAAGTATTT
GATATCAACTTTATCCTGATTAGATAAGTCGAGAAATCATTCTCTTGACA
TTAGCTCGTCCAACCATCTTTCTCTCTGTGTGACCCGGTAATTATTCCCG
TCCCGTGTGTACCTCATCATAACATTTGAAAATTTGTTCTTTTGATAAAA
ATGTATATTATTTGGTCCTAAATTGCATTCCTAATGAATGTACCCGACAA
GCTAATTATAGAGGGCGCTGAGAAAACTGACTTGAAACGCAACCGTTCCT
CCATTACATATCTCCTACATAGGATTTGAAGCTGCTAAATCCTACCTAAG
CTGCCCGACCCGGCTCGTCGTCAAAGCTAGTGATGTATATCCTAAGGCTT
CACTTTTTCTTGCCTAGGAAAGGTTCCCTTCTACAATTAGTGCCATAACA
TATTGGCACTTTTGGCTAATTTACCATTCGAAAATTGAAGTTCGAGCAAG
AATGTCAATTTCGGGCCTTCAACTTGATTTCAACGATTATTTCGATCTGG
GAGAGATTTATTGTTTTTTAGGCTATATTTCAAGCCCTACTGGACCATTT
TTGAACTTTTGGATCTTGGAGTCTTAAGTCCAGCGTTAAAACTCAGAGTT
AAAACTCTACCCTTCGAACCTACTTTAGAGCACTTGCAAATCGATTGTGG
TTTCAAAACACCCCGGTGGATTTCCTTTTTGTGCCAAGTATTTCGTCACC
GATTGTAGTGCTTGGGGCTTTTACTTCATTGGGTGTGACATTTTGCTCGA
TATTCCTTGCAATAAAGTTCCGAAATTCATATTTTTCTAGGTCAAGGGGA
CGCAAAGAAGAACCAGTCCGAAATATTCCGAAGAAGAGTTTGGTAGATTG
ACCAAGAGATTCTAATGGTGAGCTTCATGTGTTGCTTTAGAAGATTTGTT
TTTTGTGATGAGGTATTATTACTTGTGCATCCAGAGAAATTGGGTGGGTT
TACATCTAGGAGAGAATCGATTAAGAAATACAATAGAAATACCACGATTT
CTTTTGATTCCATCACGATTCCTTTGTAAATCATAATTGATTTTCCCCAA
GCTTTCTGATTGGTTCAAATTTTATTACAGAACAGGTTTTTCTATATTCA
ACCGTCTATACGTTTCAACTTTACCATACAAGTTCATGATGCGTAGTAAA
GCTTGATCAAAAAAATCATTTGCGTAGTTGTCATCATCGGCTGCGTTTAG
ACCTTTTATAAAATATCACATCATCCAGTATCCAACCAGGATTACTCCCG
GTAGGATAAAGTTGGTAGGCATTTGTAATTTGGCATTTGCTCACGAGGGA
TTCGATTTTAATAGCTTTTCCATTGTATTTTCTGTCATTGCATTTAAGGA
ATCGTCTTTTTNAGAGGCTGCGTTTAGACCAACTGGCATTTGTAATTTGG
CATTTGCTCATGAGGGATTCGATTTTAATAGCTTTTCCATTGTATTTTCT
GTCATGGCAATTAAGGAATCGTCTTTTTAGAGTCATTACTGAAAAGGTAA
TTCCCTCAACTTTGACAGATCAAACAATGAAAAGCATGGAATTTCTCAAA
AACTGCAGTCATTAAGACTGAAACTTTTTGCCGTAGGTCTAGGCTATGGC
AAATTTTGCAAATTTTACAATCTATAGAAAGAACTGAATAAAAACGTGCA
AATACTTTAAAAAATCAAAAATGTCATTTTTTCTCTTTGTTTTGGTTCCT
TTGTTTTATTTGAAATGCCAGAAAAGGGAATTCCTTTGCTCAAAATTGCA
TTTCAAATGCCAACGAAATGCCAACACGCTGGCATCATTAGGCATTTGAC
AAACCGAACAATTGCGCGGAACAATAGAATTCAAAAGAATACTGCAAGCA
ATTACAAATGCCAGGCTGGTCTAAACGCAGCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGAAAAATGTGTACAAATCTGTACTAGCTTTAAGCTAATAGAGT
TCGACTGCCTATTTTACAAAATGAATCATTCATCATCATCTGTTAATGCC
CAATCGCTGACAATTTCTTCTGTAGAGCATTTTGGTTTACAATTTGAAGA
TATTTTTGTTCGGTTTTGTAATTTTTTAACGAAGCGTAGTTTTGTTCTTG
GGCTTCCTCTTACGCACCAGTTGAATCCTTTATTGTTATTGTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAGGCGCTTAATAAT
CATCACGGTTCCTTAAATCTCATTAGATGTATGCACCTTACCCAATTTCT
ATGATGTCATTCTTTCTTTTCCAGTCAGACGAAATGAACTAAAAGCGTCG
CAGCGCCCTTTGCCATATGTTGCATATTTTGAGTAAATGAATATCTATGC
TCATAGCATCAAGCATGAAGTTTAGAGCTCAATGGTTACTTGACTGACGG
TATTTATCAGGTAAATAACTTTGTGATCATATTAGATTTCAACAATAACC
TACTAACGCGTGGTTACTGGAGAGTGATCGAGTTGATACCCCGACGTTGT
CCCCACGAACCAGTGTAGACTTCATAGCCCAGTCGGTAGCGCAGTTTAAC
TAGTAATACGAAAGTCGCGAAATTCCACCCTTTTGGTCTTTAAACATTTA
AATACAAGATTAAATTTCAAGGCAAATTCATTTCACTTCTTTAAAAGGAT
TTTAAATTTGAGGTACCTTACATAGGCTGTGTTTTTGTATAATAGACCTA
ATTAGAAAATGGCAAACAAATATTGAAGAAGAAGATGAAGACTTTCTTAA
CATAACTGAAAACTCAAAATTTTTCGTTTTAAATCACCAAAATCTTTCTT
TTGATACAGGGTGATTAAAAATCAATAAAGGGTATACAATCCAAAGCAAT
CGTCAAGCTGTCATGCGGGCGGGAATGCTCTTCGTCGATCTTGGAATGAT
CTCTAGCAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041602TCONS_00041602Clytia hemisphaericatranscript
TCONS_00041601TCONS_00041601Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041601-proteinTCONS_00041601-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002931supercontigsc0002931:288..5648 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.5	3.09	1.45	0.51	2.01	1.4	1.78	2.23	2.13	2.2	1.82	1.91	2.19	2.58	0.87	1.6	0.75	1.28	0.82	0.51	0.69	1.59	2.75	2.26	3.18	3.28	0.21	0.35	1.76	2.11