XLOC_025272 (gene) - C. hemisphaerica

Overview
NameXLOC_025272
Unique NameXLOC_025272
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002782:11608..17628-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025272 ID=XLOC_025272|Name=XLOC_025272|organism=Clytia hemisphaerica|type=gene|length=6021bp|location=Sequence derived from alignment at sc0002782:11608..17628- (Clytia hemisphaerica)
CAGATATTTTACGCCAATCGGGGCATGGCTTTGTTGAAAATGGAGAGGTA ATGTTTCAGTGAATAGACCTTTACATAAATTACGTCATGAGTGAGCATCA ATTGCCTCATATTCAAACAATTTCCATAGCGATTATGTCCCTTGGGACAT TAAATGATTTTTTTAATGAATAGAAAGTAGTTTTGATAAAATCCGCTGGG AGTTAATCACCATGGCAATAATTTCAAAACGAGGCAAGTAATGTTTGTGA CGTAATTTATGAAAAGGTACAAACGAAGAAAGTTTGAGGCTGCAGTATTT TTAAAAATCAAGCTGAATAAATTTTTATCATTATNAAGTAGTTTTGATAA AATCCGCTGGGAGTTAATCACCATGGCAATAATTTCAAAACGAGGCAAGT AATGTTTGTGACGTAATTTATGAAAAGGTACAAACGAACCATATATCGGT CATTAAGTAAGCCATTAAAGGTTCAATCGGCGGGCGGTATTGAAAGGTTT TGTGACTCAAATTGTCATGCCCAAGCTGAGGAAACTAAAGCACCAGGGTA TATAATTTTTATTTACGGATTCTCAGGGAAAAAAACAAGACGTTAATTTT CATACATACACTTTCATGTCGTCTAGGACGGTAATATTCAGTGAAAAAAT CTTATTAACTTTTTAAATTTTCTTCACTTCAAAATAAGAGTTTTTGAGCA ATCCCAGTTACATAGTTACTACTACTCTCTAAACATAAACAGAACTCCAT AAGTCGAAATTTCCATAAATCGTTCCCTAATTCTTGTTCGAGTTATGGAA ACACAGCCGGAATTTCTTTTTCAAATAAATCTTCTAACAGTGTCTTGTGA GTTTATATCTTTTCCAATTCTAATTTCTTACAGGTTTGGAGCGGCCGAGC AGGATTGCACTTTCGCTTTACAACTGGATCCGAAATACACGAAAGCTTTG TTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAAAGTGGAAGATGGCTTT AGAGGATTTCAACAATGTTTTGGAAGAAGAGCCGAGCAATAAACAAGCTG TCACTGAGATAAAGAACATCCAAAAGGTTAGAAAACATTCTTTCTCTCCA TGTTTATGGATAACCAAAATATGAGTTTCCATTTTTTAAATTACCAAAGC TGGCGAAAGTAAAACAATGGAGATACTATCCGAAAGTTTGAAATCATTAG GCTACCATTTAAAAAATTATGCTATAGATGTTACCAATTATGGCCAAGGT CCAAGTCAATAGCGCACCGCGCTGAATCTAAAAATAGATTTCCTTTTTTG ACATAATCATTACTCTCGATGTGTTTGTACGAGTTCCAATCCCATCAACC TTTGCGTTAATCTCTTTTGCACGTTAATTGCGTCATTTGACAAAATATGA TATATAATAACTTGCACGTATCTTTAATTGAACCGCATCAAATTGTGGGA TGGCAACTCGTACAAATGTCAAAAAAGTGAAAAGTAATAATTATGACGTA TGCATTGCTGAGTGTTTTTACTTTTTCTGTATTGGAATCAAATTCGACAT GAGTGTGAATCTAAACCGGATATCAAAGGATTGATCCTGTAAAGTGTCAT AAAAAATAAATGATTTATCCATGTTGAATGAAGGGTTGTGAAAAGATGCA ATATTTCTTTCTCATTAGATGATGAAAACCGACCAAGATTCACAAAAGCG AACACACAAAGAAGAACAGACGAAAACGAGAACAGAAAAACAAGAAAAGC GAAAGAAAAGATCTACCGTCAGTAGCATTTCACATCATGGTTGTCCCGAA CTTTTCATGTTTCTTTTCGACTACAGTCTCTTTAACTCGAACCTCTATAA CTCGATGTCTCCTTTCCTCGAACAAGCCTTCTCGTCACTGCAGTTAGCAA TGCCTTATAAACCAATCTCCATAACTCGAAACTTCCCTAACTCGAACAAA TTTGTGATCCTCGTGCGGGTTCAAGTTATAGAAATTGCATTAAAAAATCC TTTCTCTAACCCTATCTAAAGTCTATTCACGATAAGTGTGCACTCTTTTT TCATTTACCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGT ATCATTGGAAAGATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCTTAACAAAGACATCATAAACCACGTGTGGTT AACACCAGGTTGTGCCATATCGTCGAAATTACTTGTTCTAGCTCTCAAGT ATTTAATTTTGCGAGTAACGCTACTACCTCTGGTACAGTTCCTCGTATTC TCCCTCATACCTTTTTATCAGTGTTACCTTCGAAAGGGATGGTACATTTA CCTGCCTGGTGGATTCATGTACTCTTTTCGTTTTAGAAGCCGTTGAAAAG AATTTATATACAGGAGGTTGGAGGATCAGAAGACGAAAGTGAACAACCGC AGAAAACGAACGAAAAGTCACCTGCATATAGCAAACATGAAGAAACTCTT GAGAAACGGTATTTGTTATCTTGAAGATTCTTCCAAACATCAGCCAACAA GAAACAAACAAGAAACAAACAAGTCAACTACTTTATCACTTTATACTGAT TGTAATGAGTTAAAAAGTGTAATAGCATATGTTTTGGGTGGCATGCTCCG AAAAATTAGAAAGCTTTTAGGCAGCTGAAAAATTGTTTCCACGAAGGGCC ACTATGAACAGAAAAAATGGTTCTATCAGCGTGCTGGGAAAGAAGTCTTT TCACTAAATCTTTAGACTAGAGCCTACTTCCTACTGCTTTCTGATATTTT TAGATGGGACTGAGTTTGTCGAGTCCAGTGAAGTGGTGGCCCACAGGCTA CTAAATGCTGAAAAGATTCCGAATGCAACTTAGGCAACCATTCCCTTTCT ACCCTTTGGTATTTTTTTCCAGCGTTCCAGCGCTTCATGAGTCATCAACA CTCTCCAAACATTCAACGTCTCCACCGAAAACAACACGTGATGATGAAGA TGTAAAGAATGTTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGAAA CAGAACTGAAACGACTGAAAGATCAACCGGATGTCTTCTACCAGTATCTG AGAGTAAGGTTTTCTGGTCTGTAAAATACACAAGTGTCCGAAAATAAAAT TGGAAACATTCTATTTTCGATTTCGAGGGATGTACTTTCCAAAAATGTAC TCTATAATGAGATAAACTTTCACGGGGATTAAATTTCGTGGTTTAGCTTA TCCGCGAAATCTTAAAATTTCGGACTTAATTTCGCGGTATACAGTAGGTA TTGGGAGATAAAGTCATCCATGTTGGTTGTTGGAATACATATAAAAAATA GATATTTGACATTTGTTGAGTTTTGTCGATTAAAATATTTTGTGGATAAG TCCTTTCCAAACTTCTATTGGGACTTATTTTCGCGGATGACACTCAAATC CGTGAAATCTAATCCCCGCGAAATTTTATCCCATTAAAGCATAACAAGTG CTTTGACTAAAAAATCTAACGGTATAAAAAAATTGGAAAAAATCCCCTCG GCTACCGGTATATGGGTTGGTTTGACAAGAGTAGAAGATGAGATTTTAAG TGAGGGTAATGTCAAGTCTTTGTGAATTTTCTAGTTCTCTAGAAAGAATC TGAATTAAAGTTTCTATTGCTTCAAGGGGCTATGATCGAAATGAAGACAT TTGTTAAACTCTTTCATTCATTGAACAAAAAAACTTTTAGCCTTGCTCTT AAGTCTTGTTATTTTTACTGATGGCAAACGATAACCACCGCCTCTATCTT TTCTTTTCTAGATGATACCATGTGCACAATACACGAAATTGTTTCGACAA TGCGTTGACAGTTTGATATCCATCTTCCTCAGCACTCTCCATGGTTACTA TATCAGGTGAAAATTGAGTAAAAGTCTATTGAGTTTAAACCCGAAAGGCT AGAGCGGAATCTTCAACCTTTCTCAAGCAGAAATACGTAAAGCTTTAAAG ATCTGTTACGGTGGCGATGGGTTAAATCTAGTACTTGCTTTGTTTTCAAG GGGTACATTTTTCGAAATCACTCGATAGATTTCGCTTTCGATCCGGCGTT TGTGTAACAAATCTTTAGGCTTTTCTTTTTTCTGACATTTATTACGAAAA CCTATGCATAAATTCCCTTTCTTATGAAATATGGTTAAAACCTCGCGGCT CACGCGTTTCACATCCAAGAGATTCCACTCTTGCTTTCGAACTTTAAGCT CAACGGTCGCAATGCTATGGAACGCCCGGGTGGAAGGAATTTTGGGATGT AGTGAGAAGTTGACAATGAACAGTAATAGTAATTTACTTGAAACTTAACA CGTTCGCTGCCGAGCCTTTTTCAGAAATCGAAGATTCGACCTCTTGAAAT GTTATCGCAAGTTTGACTCTCAAATCAAAGCCTCCCTTTGGCCTGGGTTT TCTTCAAACGCCTTCAAGTATCCGTGCAGTTTTATTGACGAGTGGTAAAT TATAGTGTGGAAGTTCGACGCTGTTCATAGTACATAGCGGTTCAAAATAC CGCGAGGTGTCTTTTTGCAAGGCCTTTATCGTAAGGTTTTCGTTGAAAAA ACTTTTTCTAGTTTGCAATTTGTGATCTTCTTTCATTTTTTTTGTTATAA CTTACAACGCTATTTTTTTATTTCTTCTTTCTGTAGAGATAAGCTCTGTG TTCATTTGGAGTTGGAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGCA ACCATGTTTCTATCCAAAAACGACAAAAAAGGTTAGTGGAGTAGGGAAAT GCTATCAGAGTTCGTTGCTATCGCATCTATCAGAGTCAGGCTAGTGGAGG GAAGGAGTCGCCCTACTATTCCTTTCTAAAGCCGGGTCCAGCTTAAGCCA CTGCCCATATATTCTACTGTCGTTCTAAAATACGCCACTTATTTTTTTTA CTAACTTTTTCAAGGCCCGTAGCTCGTCCCAGGCCACCCCCAAAAAAAAA GCATCAACCCAAGAAACAAGTGCGTATAGTTTTAGCAAGATCCGACTATT TCTTAAGTCTCTAAGCTTACTCAAACTTTACTTTAGCCTCGTTTGGGAAA ACAGACCCTTATAATCAGATGCAGGACATGAAACTGTTAGTACATATGAT TTACGTTTTCGATGTATTGAAAGAGTAATTTCACATCCTGGTCCTCCAAT GCTCATTCGATTTCAGAATTGAGATTCAAGAGTTTTGGCCATTGTGTAGG TTTGCAACATTGAATTCAAAAAGTACCCTGATCAGCAAGGTAAAATGGAA TACCAGACAATCTTTTCTAATCAAAACTTTTTTTTCTGTTTTCAGTGATC GTAGAGTTGTTGAATTACATGGAATCAGCAGAATACCCGGTGAAGTTGAC GGAACAACAAATTGCGAGTTTGCGGAAAAGCTACAAATGATTAGTTTTAG GTTTTTGTTGCAAGACTGTTATTGAACGGAAAAGAAATCTGGAGAGAATT GAAATTATATTGTCTTCGTTTTTTTATCCATACATGTACATGTCTTTTTA TAAGCATATCTAGGCTCAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041277TCONS_00041277Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041277-proteinTCONS_00041277-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002782supercontigsc0002782:11608..17628 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.58 27.05 11.59 10.49 6.81 5.24 7.33 8.95 11.05 10.76 14.64 13.29 14.55 19.45 26.12 22.66 15.25 18.73 16.86 12.65 15.6 15.12 31.31 24.38 16.94 17.48 10.7 13.77 19.06 22.29