TCONS_00041277 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041277
Unique NameTCONS_00041277
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1058

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041277 ID=TCONS_00041277|Name=TCONS_00041277|organism=Clytia hemisphaerica|type=transcript|length=1058bp
CAGATATTTTACGCCAATCGGGGCATGGCTTTGTTGAAAATGGAGAGGTT
TGGAGCGGCCGAGCAGGATTGCACTTTCGCTTTACAACTGGATCCGAAAT
ACACGAAAGCTTTGTTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAAAG
TGGAAGATGGCTTTAGAGGATTTCAACAATGTTTTGGAAGAAGAGCCGAG
CAATAAACAAGCTGTCACTGAgataaagaacatccaaaagATGATGAAAA
CCGACCAAGATTCACAAAAGCGAACACACAAAGAAGAACAGACGAAAACG
AGAAcagaaaaacaagaaaagcGAAAGAAAAGATCTACCAAGCCGTTGAA
AAGAATTTATATACAGGAGGTTGGAGGATCAGAAGACGAAAGTGAACAAC
CGCAGAAAACGAACGAAAAGTCACCTGCATATAGCAAACATGAAGAAACT
CTTGAGAAACGCGTTCCAGCGCTTCATGAGTCATCAACACTCTCCAAACA
TTCAACGTCTCCACCGAAAACAACACGTGATGATGAAGATGTAAAGAATG
TTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGAAACAGAACTGAAA
CGACTGAAAGATCAACCGGATGTCTTCTACCAGTATCTGAGAatgaTACC
ATGTGCACAATACACGAAATTGTTTCGACAATGCGTTGACAGTTTGATAT
CCATCTTCCTCAGCACTCTCCATGGTTACTATATCAgAGATAAGCTCTGT
GTTCATTTGGAGTTGGAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGC
AACCATGTTTCTAtccaaaaacgacaaaaaagTGATCGTAGAGTTGTTGA
ATTACATGGAATCAGCAGAATACCCGGTGAAGTTGACGGAACAACAAATT
GCGAGTTTGCGGAAAAGCTACAAATGATTAGTTTTAGGTTTTTGTTGCAA
GACTGTTATTGAACGGAAAAGAAATCTGGAGAGAATTGAAATTATATTGT
CTTCGTTTTTTTATCCATACATGTACatgtctttttataagcatatctag
gctcagat
Run BLAST on NCBI

protein sequence of TCONS_00041277-protein

>TCONS_00041277-protein ID=TCONS_00041277-protein|Name=TCONS_00041277-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
QIFYANRGMALLKMERFGAAEQDCTFALQLDPKYTKALLRRATARLKLKK
WKMALEDFNNVLEEEPSNKQAVTEIKNIQKMMKTDQDSQKRTHKEEQTKT
RTEKQEKRKKRSTKPLKRIYIQEVGGSEDESEQPQKTNEKSPAYSKHEET
LEKRVPALHESSTLSKHSTSPPKTTRDDEDVKNVDSVIPTTSFMFETELK
RLKDQPDVFYQYLRMIPCAQYTKLFRQCVDSLISIFLSTLHGYYIRDKLC
VHLELENFCKVERFAMATMFLSKNDKKVIVELLNYMESAEYPVKLTEQQI
ASLRKSYK
Run BLAST on NCBI

transcript from alignment at sc0002782:11608..17628-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041277 ID=TCONS_00041277|Name=TCONS_00041277|organism=Clytia hemisphaerica|type=transcript|length=6021bp|location=Sequence derived from alignment at sc0002782:11608..17628- (Clytia hemisphaerica)
CAGATATTTTACGCCAATCGGGGCATGGCTTTGTTGAAAATGGAGAGGTA
ATGTTTCAGTGAATAGACCTTTACATAAATTACGTCATGAGTGAGCATCA
ATTGCCTCATATTCAAACAATTTCCATAGCGATTATGTCCCTTGGGACAT
TAAATGATTTTTTTAATGAATAGAAAGTAGTTTTGATAAAATCCGCTGGG
AGTTAATCACCATGGCAATAATTTCAAAACGAGGCAAGTAATGTTTGTGA
CGTAATTTATGAAAAGGTACAAACGAAGAAAGTTTGAGGCTGCAGTATTT
TTAAAAATCAAGCTGAATAAATTTTTATCATTATNAAGTAGTTTTGATAA
AATCCGCTGGGAGTTAATCACCATGGCAATAATTTCAAAACGAGGCAAGT
AATGTTTGTGACGTAATTTATGAAAAGGTACAAACGAACCATATATCGGT
CATTAAGTAAGCCATTAAAGGTTCAATCGGCGGGCGGTATTGAAAGGTTT
TGTGACTCAAATTGTCATGCCCAAGCTGAGGAAACTAAAGCACCAGGGTA
TATAATTTTTATTTACGGATTCTCAGGGAAAAAAACAAGACGTTAATTTT
CATACATACACTTTCATGTCGTCTAGGACGGTAATATTCAGTGAAAAAAT
CTTATTAACTTTTTAAATTTTCTTCACTTCAAAATAAGAGTTTTTGAGCA
ATCCCAGTTACATAGTTACTACTACTCTCTAAACATAAACAGAACTCCAT
AAGTCGAAATTTCCATAAATCGTTCCCTAATTCTTGTTCGAGTTATGGAA
ACACAGCCGGAATTTCTTTTTCAAATAAATCTTCTAACAGTGTCTTGTGA
GTTTATATCTTTTCCAATTCTAATTTCTTACAGGTTTGGAGCGGCCGAGC
AGGATTGCACTTTCGCTTTACAACTGGATCCGAAATACACGAAAGCTTTG
TTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAAAGTGGAAGATGGCTTT
AGAGGATTTCAACAATGTTTTGGAAGAAGAGCCGAGCAATAAACAAGCTG
TCACTGAGATAAAGAACATCCAAAAGGTTAGAAAACATTCTTTCTCTCCA
TGTTTATGGATAACCAAAATATGAGTTTCCATTTTTTAAATTACCAAAGC
TGGCGAAAGTAAAACAATGGAGATACTATCCGAAAGTTTGAAATCATTAG
GCTACCATTTAAAAAATTATGCTATAGATGTTACCAATTATGGCCAAGGT
CCAAGTCAATAGCGCACCGCGCTGAATCTAAAAATAGATTTCCTTTTTTG
ACATAATCATTACTCTCGATGTGTTTGTACGAGTTCCAATCCCATCAACC
TTTGCGTTAATCTCTTTTGCACGTTAATTGCGTCATTTGACAAAATATGA
TATATAATAACTTGCACGTATCTTTAATTGAACCGCATCAAATTGTGGGA
TGGCAACTCGTACAAATGTCAAAAAAGTGAAAAGTAATAATTATGACGTA
TGCATTGCTGAGTGTTTTTACTTTTTCTGTATTGGAATCAAATTCGACAT
GAGTGTGAATCTAAACCGGATATCAAAGGATTGATCCTGTAAAGTGTCAT
AAAAAATAAATGATTTATCCATGTTGAATGAAGGGTTGTGAAAAGATGCA
ATATTTCTTTCTCATTAGATGATGAAAACCGACCAAGATTCACAAAAGCG
AACACACAAAGAAGAACAGACGAAAACGAGAACAGAAAAACAAGAAAAGC
GAAAGAAAAGATCTACCGTCAGTAGCATTTCACATCATGGTTGTCCCGAA
CTTTTCATGTTTCTTTTCGACTACAGTCTCTTTAACTCGAACCTCTATAA
CTCGATGTCTCCTTTCCTCGAACAAGCCTTCTCGTCACTGCAGTTAGCAA
TGCCTTATAAACCAATCTCCATAACTCGAAACTTCCCTAACTCGAACAAA
TTTGTGATCCTCGTGCGGGTTCAAGTTATAGAAATTGCATTAAAAAATCC
TTTCTCTAACCCTATCTAAAGTCTATTCACGATAAGTGTGCACTCTTTTT
TCATTTACCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGT
ATCATTGGAAAGATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCTTAACAAAGACATCATAAACCACGTGTGGTT
AACACCAGGTTGTGCCATATCGTCGAAATTACTTGTTCTAGCTCTCAAGT
ATTTAATTTTGCGAGTAACGCTACTACCTCTGGTACAGTTCCTCGTATTC
TCCCTCATACCTTTTTATCAGTGTTACCTTCGAAAGGGATGGTACATTTA
CCTGCCTGGTGGATTCATGTACTCTTTTCGTTTTAGAAGCCGTTGAAAAG
AATTTATATACAGGAGGTTGGAGGATCAGAAGACGAAAGTGAACAACCGC
AGAAAACGAACGAAAAGTCACCTGCATATAGCAAACATGAAGAAACTCTT
GAGAAACGGTATTTGTTATCTTGAAGATTCTTCCAAACATCAGCCAACAA
GAAACAAACAAGAAACAAACAAGTCAACTACTTTATCACTTTATACTGAT
TGTAATGAGTTAAAAAGTGTAATAGCATATGTTTTGGGTGGCATGCTCCG
AAAAATTAGAAAGCTTTTAGGCAGCTGAAAAATTGTTTCCACGAAGGGCC
ACTATGAACAGAAAAAATGGTTCTATCAGCGTGCTGGGAAAGAAGTCTTT
TCACTAAATCTTTAGACTAGAGCCTACTTCCTACTGCTTTCTGATATTTT
TAGATGGGACTGAGTTTGTCGAGTCCAGTGAAGTGGTGGCCCACAGGCTA
CTAAATGCTGAAAAGATTCCGAATGCAACTTAGGCAACCATTCCCTTTCT
ACCCTTTGGTATTTTTTTCCAGCGTTCCAGCGCTTCATGAGTCATCAACA
CTCTCCAAACATTCAACGTCTCCACCGAAAACAACACGTGATGATGAAGA
TGTAAAGAATGTTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGAAA
CAGAACTGAAACGACTGAAAGATCAACCGGATGTCTTCTACCAGTATCTG
AGAGTAAGGTTTTCTGGTCTGTAAAATACACAAGTGTCCGAAAATAAAAT
TGGAAACATTCTATTTTCGATTTCGAGGGATGTACTTTCCAAAAATGTAC
TCTATAATGAGATAAACTTTCACGGGGATTAAATTTCGTGGTTTAGCTTA
TCCGCGAAATCTTAAAATTTCGGACTTAATTTCGCGGTATACAGTAGGTA
TTGGGAGATAAAGTCATCCATGTTGGTTGTTGGAATACATATAAAAAATA
GATATTTGACATTTGTTGAGTTTTGTCGATTAAAATATTTTGTGGATAAG
TCCTTTCCAAACTTCTATTGGGACTTATTTTCGCGGATGACACTCAAATC
CGTGAAATCTAATCCCCGCGAAATTTTATCCCATTAAAGCATAACAAGTG
CTTTGACTAAAAAATCTAACGGTATAAAAAAATTGGAAAAAATCCCCTCG
GCTACCGGTATATGGGTTGGTTTGACAAGAGTAGAAGATGAGATTTTAAG
TGAGGGTAATGTCAAGTCTTTGTGAATTTTCTAGTTCTCTAGAAAGAATC
TGAATTAAAGTTTCTATTGCTTCAAGGGGCTATGATCGAAATGAAGACAT
TTGTTAAACTCTTTCATTCATTGAACAAAAAAACTTTTAGCCTTGCTCTT
AAGTCTTGTTATTTTTACTGATGGCAAACGATAACCACCGCCTCTATCTT
TTCTTTTCTAGATGATACCATGTGCACAATACACGAAATTGTTTCGACAA
TGCGTTGACAGTTTGATATCCATCTTCCTCAGCACTCTCCATGGTTACTA
TATCAGGTGAAAATTGAGTAAAAGTCTATTGAGTTTAAACCCGAAAGGCT
AGAGCGGAATCTTCAACCTTTCTCAAGCAGAAATACGTAAAGCTTTAAAG
ATCTGTTACGGTGGCGATGGGTTAAATCTAGTACTTGCTTTGTTTTCAAG
GGGTACATTTTTCGAAATCACTCGATAGATTTCGCTTTCGATCCGGCGTT
TGTGTAACAAATCTTTAGGCTTTTCTTTTTTCTGACATTTATTACGAAAA
CCTATGCATAAATTCCCTTTCTTATGAAATATGGTTAAAACCTCGCGGCT
CACGCGTTTCACATCCAAGAGATTCCACTCTTGCTTTCGAACTTTAAGCT
CAACGGTCGCAATGCTATGGAACGCCCGGGTGGAAGGAATTTTGGGATGT
AGTGAGAAGTTGACAATGAACAGTAATAGTAATTTACTTGAAACTTAACA
CGTTCGCTGCCGAGCCTTTTTCAGAAATCGAAGATTCGACCTCTTGAAAT
GTTATCGCAAGTTTGACTCTCAAATCAAAGCCTCCCTTTGGCCTGGGTTT
TCTTCAAACGCCTTCAAGTATCCGTGCAGTTTTATTGACGAGTGGTAAAT
TATAGTGTGGAAGTTCGACGCTGTTCATAGTACATAGCGGTTCAAAATAC
CGCGAGGTGTCTTTTTGCAAGGCCTTTATCGTAAGGTTTTCGTTGAAAAA
ACTTTTTCTAGTTTGCAATTTGTGATCTTCTTTCATTTTTTTTGTTATAA
CTTACAACGCTATTTTTTTATTTCTTCTTTCTGTAGAGATAAGCTCTGTG
TTCATTTGGAGTTGGAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGCA
ACCATGTTTCTATCCAAAAACGACAAAAAAGGTTAGTGGAGTAGGGAAAT
GCTATCAGAGTTCGTTGCTATCGCATCTATCAGAGTCAGGCTAGTGGAGG
GAAGGAGTCGCCCTACTATTCCTTTCTAAAGCCGGGTCCAGCTTAAGCCA
CTGCCCATATATTCTACTGTCGTTCTAAAATACGCCACTTATTTTTTTTA
CTAACTTTTTCAAGGCCCGTAGCTCGTCCCAGGCCACCCCCAAAAAAAAA
GCATCAACCCAAGAAACAAGTGCGTATAGTTTTAGCAAGATCCGACTATT
TCTTAAGTCTCTAAGCTTACTCAAACTTTACTTTAGCCTCGTTTGGGAAA
ACAGACCCTTATAATCAGATGCAGGACATGAAACTGTTAGTACATATGAT
TTACGTTTTCGATGTATTGAAAGAGTAATTTCACATCCTGGTCCTCCAAT
GCTCATTCGATTTCAGAATTGAGATTCAAGAGTTTTGGCCATTGTGTAGG
TTTGCAACATTGAATTCAAAAAGTACCCTGATCAGCAAGGTAAAATGGAA
TACCAGACAATCTTTTCTAATCAAAACTTTTTTTTCTGTTTTCAGTGATC
GTAGAGTTGTTGAATTACATGGAATCAGCAGAATACCCGGTGAAGTTGAC
GGAACAACAAATTGCGAGTTTGCGGAAAAGCTACAAATGATTAGTTTTAG
GTTTTTGTTGCAAGACTGTTATTGAACGGAAAAGAAATCTGGAGAGAATT
GAAATTATATTGTCTTCGTTTTTTTATCCATACATGTACATGTCTTTTTA
TAAGCATATCTAGGCTCAGAT

Coding sequence (CDS) from alignment at sc0002782:11608..17628-

>TCONS_00041277 ID=TCONS_00041277|Name=TCONS_00041277|organism=Clytia hemisphaerica|type=CDS|length=7416bp|location=Sequence derived from alignment at sc0002782:11608..17628- (Clytia hemisphaerica)
TGATCGTAGAGTTGTTGAATTACATGGAATCAGCAGAATACCCGGTGAAG
TTGACGGAACAACAAATTGCGAGTTTGCGGAAAAGCTACAAATGAAGATA
AGCTCTGTGTTCATTTGGAGTTGGAGAATTTTTGTAAAGTGGAACGTTTT
GCCATGGCAACCATGTTTCTATCCAAAAACGACAAAAAAGATGATACCAT
GTGCACAATACACGAAATTGTTTCGACAATGCGTTGACAGTTTGATATCC
ATCTTCCTCAGCACTCTCCATGGTTACTATATCAGCGTTCCAGCGCTTCA
TGAGTCATCAACACTCTCCAAACATTCAACGTCTCCACCGAAAACAACAC
GTGATGATGAAGATGTAAAGAATGTTGATTCGGTCATCCCAACAACTTCT
TTCATGTTTGAAACAGAACTGAAACGACTGAAAGATCAACCGGATGTCTT
CTACCAGTATCTGAGAAAGCCGTTGAAAAGAATTTATATACAGGAGGTTG
GAGGATCAGAAGACGAAAGTGAACAACCGCAGAAAACGAACGAAAAGTCA
CCTGCATATAGCAAACATGAAGAAACTCTTGAGAAACGATGATGAAAACC
GACCAAGATTCACAAAAGCGAACACACAAAGAAGAACAGACGAAAACGAG
AACAGAAAAACAAGAAAAGCGAAAGAAAAGATCTACCGTTTGGAGCGGCC
GAGCAGGATTGCACTTTCGCTTTACAACTGGATCCGAAATACACGAAAGC
TTTGTTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAAAGTGGAAGATGG
CTTTAGAGGATTTCAACAATGTTTTGGAAGAAGAGCCGAGCAATAAACAA
GCTGTCACTGAGATAAAGAACATCCAAAAGCAGATATTTTACGCCAATCG
GGGCATGGCTTTGTTGAAAATGGAGAGTGATCGTAGAGTTGTTGAATTAC
ATGGAATCAGCAGAATACCCGGTGAAGTTGACGGAACAACAAATTGCGAG
TTTGCGGAAAAGCTACAAATGAAGATAAGCTCTGTGTTCATTTGGAGTTG
GAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGCAACCATGTTTCTATC
CAAAAACGACAAAAAAGATGATACCATGTGCACAATACACGAAATTGTTT
CGACAATGCGTTGACAGTTTGATATCCATCTTCCTCAGCACTCTCCATGG
TTACTATATCAGCGTTCCAGCGCTTCATGAGTCATCAACACTCTCCAAAC
ATTCAACGTCTCCACCGAAAACAACACGTGATGATGAAGATGTAAAGAAT
GTTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGAAACAGAACTGAA
ACGACTGAAAGATCAACCGGATGTCTTCTACCAGTATCTGAGAAAGCCGT
TGAAAAGAATTTATATACAGGAGGTTGGAGGATCAGAAGACGAAAGTGAA
CAACCGCAGAAAACGAACGAAAAGTCACCTGCATATAGCAAACATGAAGA
AACTCTTGAGAAACGATGATGAAAACCGACCAAGATTCACAAAAGCGAAC
ACACAAAGAAGAACAGACGAAAACGAGAACAGAAAAACAAGAAAAGCGAA
AGAAAAGATCTACCGTTTGGAGCGGCCGAGCAGGATTGCACTTTCGCTTT
ACAACTGGATCCGAAATACACGAAAGCTTTGTTGCGGAGAGCGACTGCTC
GTTTGAAACTGAAAAAGTGGAAGATGGCTTTAGAGGATTTCAACAATGTT
TTGGAAGAAGAGCCGAGCAATAAACAAGCTGTCACTGAGATAAAGAACAT
CCAAAAGCAGATATTTTACGCCAATCGGGGCATGGCTTTGTTGAAAATGG
AGAGTGATCGTAGAGTTGTTGAATTACATGGAATCAGCAGAATACCCGGT
GAAGTTGACGGAACAACAAATTGCGAGTTTGCGGAAAAGCTACAAATGAA
GATAAGCTCTGTGTTCATTTGGAGTTGGAGAATTTTTGTAAAGTGGAACG
TTTTGCCATGGCAACCATGTTTCTATCCAAAAACGACAAAAAAGATGATA
CCATGTGCACAATACACGAAATTGTTTCGACAATGCGTTGACAGTTTGAT
ATCCATCTTCCTCAGCACTCTCCATGGTTACTATATCAGCGTTCCAGCGC
TTCATGAGTCATCAACACTCTCCAAACATTCAACGTCTCCACCGAAAACA
ACACGTGATGATGAAGATGTAAAGAATGTTGATTCGGTCATCCCAACAAC
TTCTTTCATGTTTGAAACAGAACTGAAACGACTGAAAGATCAACCGGATG
TCTTCTACCAGTATCTGAGAAAGCCGTTGAAAAGAATTTATATACAGGAG
GTTGGAGGATCAGAAGACGAAAGTGAACAACCGCAGAAAACGAACGAAAA
GTCACCTGCATATAGCAAACATGAAGAAACTCTTGAGAAACGATGATGAA
AACCGACCAAGATTCACAAAAGCGAACACACAAAGAAGAACAGACGAAAA
CGAGAACAGAAAAACAAGAAAAGCGAAAGAAAAGATCTACCGTTTGGAGC
GGCCGAGCAGGATTGCACTTTCGCTTTACAACTGGATCCGAAATACACGA
AAGCTTTGTTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAAAGTGGAAG
ATGGCTTTAGAGGATTTCAACAATGTTTTGGAAGAAGAGCCGAGCAATAA
ACAAGCTGTCACTGAGATAAAGAACATCCAAAAGCAGATATTTTACGCCA
ATCGGGGCATGGCTTTGTTGAAAATGGAGAGTGATCGTAGAGTTGTTGAA
TTACATGGAATCAGCAGAATACCCGGTGAAGTTGACGGAACAACAAATTG
CGAGTTTGCGGAAAAGCTACAAATGAAGATAAGCTCTGTGTTCATTTGGA
GTTGGAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGCAACCATGTTTC
TATCCAAAAACGACAAAAAAGATGATACCATGTGCACAATACACGAAATT
GTTTCGACAATGCGTTGACAGTTTGATATCCATCTTCCTCAGCACTCTCC
ATGGTTACTATATCAGCGTTCCAGCGCTTCATGAGTCATCAACACTCTCC
AAACATTCAACGTCTCCACCGAAAACAACACGTGATGATGAAGATGTAAA
GAATGTTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGAAACAGAAC
TGAAACGACTGAAAGATCAACCGGATGTCTTCTACCAGTATCTGAGAAAG
CCGTTGAAAAGAATTTATATACAGGAGGTTGGAGGATCAGAAGACGAAAG
TGAACAACCGCAGAAAACGAACGAAAAGTCACCTGCATATAGCAAACATG
AAGAAACTCTTGAGAAACGATGATGAAAACCGACCAAGATTCACAAAAGC
GAACACACAAAGAAGAACAGACGAAAACGAGAACAGAAAAACAAGAAAAG
CGAAAGAAAAGATCTACCGTTTGGAGCGGCCGAGCAGGATTGCACTTTCG
CTTTACAACTGGATCCGAAATACACGAAAGCTTTGTTGCGGAGAGCGACT
GCTCGTTTGAAACTGAAAAAGTGGAAGATGGCTTTAGAGGATTTCAACAA
TGTTTTGGAAGAAGAGCCGAGCAATAAACAAGCTGTCACTGAGATAAAGA
ACATCCAAAAGCAGATATTTTACGCCAATCGGGGCATGGCTTTGTTGAAA
ATGGAGAGTGATCGTAGAGTTGTTGAATTACATGGAATCAGCAGAATACC
CGGTGAAGTTGACGGAACAACAAATTGCGAGTTTGCGGAAAAGCTACAAA
TGAAGATAAGCTCTGTGTTCATTTGGAGTTGGAGAATTTTTGTAAAGTGG
AACGTTTTGCCATGGCAACCATGTTTCTATCCAAAAACGACAAAAAAGAT
GATACCATGTGCACAATACACGAAATTGTTTCGACAATGCGTTGACAGTT
TGATATCCATCTTCCTCAGCACTCTCCATGGTTACTATATCAGCGTTCCA
GCGCTTCATGAGTCATCAACACTCTCCAAACATTCAACGTCTCCACCGAA
AACAACACGTGATGATGAAGATGTAAAGAATGTTGATTCGGTCATCCCAA
CAACTTCTTTCATGTTTGAAACAGAACTGAAACGACTGAAAGATCAACCG
GATGTCTTCTACCAGTATCTGAGAAAGCCGTTGAAAAGAATTTATATACA
GGAGGTTGGAGGATCAGAAGACGAAAGTGAACAACCGCAGAAAACGAACG
AAAAGTCACCTGCATATAGCAAACATGAAGAAACTCTTGAGAAACGATGA
TGAAAACCGACCAAGATTCACAAAAGCGAACACACAAAGAAGAACAGACG
AAAACGAGAACAGAAAAACAAGAAAAGCGAAAGAAAAGATCTACCGTTTG
GAGCGGCCGAGCAGGATTGCACTTTCGCTTTACAACTGGATCCGAAATAC
ACGAAAGCTTTGTTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAAAGTG
GAAGATGGCTTTAGAGGATTTCAACAATGTTTTGGAAGAAGAGCCGAGCA
ATAAACAAGCTGTCACTGAGATAAAGAACATCCAAAAGCAGATATTTTAC
GCCAATCGGGGCATGGCTTTGTTGAAAATGGAGAGTGATCGTAGAGTTGT
TGAATTACATGGAATCAGCAGAATACCCGGTGAAGTTGACGGAACAACAA
ATTGCGAGTTTGCGGAAAAGCTACAAATGAAGATAAGCTCTGTGTTCATT
TGGAGTTGGAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGCAACCATG
TTTCTATCCAAAAACGACAAAAAAGATGATACCATGTGCACAATACACGA
AATTGTTTCGACAATGCGTTGACAGTTTGATATCCATCTTCCTCAGCACT
CTCCATGGTTACTATATCAGCGTTCCAGCGCTTCATGAGTCATCAACACT
CTCCAAACATTCAACGTCTCCACCGAAAACAACACGTGATGATGAAGATG
TAAAGAATGTTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGAAACA
GAACTGAAACGACTGAAAGATCAACCGGATGTCTTCTACCAGTATCTGAG
AAAGCCGTTGAAAAGAATTTATATACAGGAGGTTGGAGGATCAGAAGACG
AAAGTGAACAACCGCAGAAAACGAACGAAAAGTCACCTGCATATAGCAAA
CATGAAGAAACTCTTGAGAAACGATGATGAAAACCGACCAAGATTCACAA
AAGCGAACACACAAAGAAGAACAGACGAAAACGAGAACAGAAAAACAAGA
AAAGCGAAAGAAAAGATCTACCGTTTGGAGCGGCCGAGCAGGATTGCACT
TTCGCTTTACAACTGGATCCGAAATACACGAAAGCTTTGTTGCGGAGAGC
GACTGCTCGTTTGAAACTGAAAAAGTGGAAGATGGCTTTAGAGGATTTCA
ACAATGTTTTGGAAGAAGAGCCGAGCAATAAACAAGCTGTCACTGAGATA
AAGAACATCCAAAAGCAGATATTTTACGCCAATCGGGGCATGGCTTTGTT
GAAAATGGAGAGTGATCGTAGAGTTGTTGAATTACATGGAATCAGCAGAA
TACCCGGTGAAGTTGACGGAACAACAAATTGCGAGTTTGCGGAAAAGCTA
CAAATGAAGATAAGCTCTGTGTTCATTTGGAGTTGGAGAATTTTTGTAAA
GTGGAACGTTTTGCCATGGCAACCATGTTTCTATCCAAAAACGACAAAAA
AGATGATACCATGTGCACAATACACGAAATTGTTTCGACAATGCGTTGAC
AGTTTGATATCCATCTTCCTCAGCACTCTCCATGGTTACTATATCAGCGT
TCCAGCGCTTCATGAGTCATCAACACTCTCCAAACATTCAACGTCTCCAC
CGAAAACAACACGTGATGATGAAGATGTAAAGAATGTTGATTCGGTCATC
CCAACAACTTCTTTCATGTTTGAAACAGAACTGAAACGACTGAAAGATCA
ACCGGATGTCTTCTACCAGTATCTGAGAAAGCCGTTGAAAAGAATTTATA
TACAGGAGGTTGGAGGATCAGAAGACGAAAGTGAACAACCGCAGAAAACG
AACGAAAAGTCACCTGCATATAGCAAACATGAAGAAACTCTTGAGAAACG
ATGATGAAAACCGACCAAGATTCACAAAAGCGAACACACAAAGAAGAACA
GACGAAAACGAGAACAGAAAAACAAGAAAAGCGAAAGAAAAGATCTACCG
TTTGGAGCGGCCGAGCAGGATTGCACTTTCGCTTTACAACTGGATCCGAA
ATACACGAAAGCTTTGTTGCGGAGAGCGACTGCTCGTTTGAAACTGAAAA
AGTGGAAGATGGCTTTAGAGGATTTCAACAATGTTTTGGAAGAAGAGCCG
AGCAATAAACAAGCTGTCACTGAGATAAAGAACATCCAAAAGCAGATATT
TTACGCCAATCGGGGCATGGCTTTGTTGAAAATGGAGAGTGATCGTAGAG
TTGTTGAATTACATGGAATCAGCAGAATACCCGGTGAAGTTGACGGAACA
ACAAATTGCGAGTTTGCGGAAAAGCTACAAATGAAGATAAGCTCTGTGTT
CATTTGGAGTTGGAGAATTTTTGTAAAGTGGAACGTTTTGCCATGGCAAC
CATGTTTCTATCCAAAAACGACAAAAAAGATGATACCATGTGCACAATAC
ACGAAATTGTTTCGACAATGCGTTGACAGTTTGATATCCATCTTCCTCAG
CACTCTCCATGGTTACTATATCAGCGTTCCAGCGCTTCATGAGTCATCAA
CACTCTCCAAACATTCAACGTCTCCACCGAAAACAACACGTGATGATGAA
GATGTAAAGAATGTTGATTCGGTCATCCCAACAACTTCTTTCATGTTTGA
AACAGAACTGAAACGACTGAAAGATCAACCGGATGTCTTCTACCAGTATC
TGAGAAAGCCGTTGAAAAGAATTTATATACAGGAGGTTGGAGGATCAGAA
GACGAAAGTGAACAACCGCAGAAAACGAACGAAAAGTCACCTGCATATAG
CAAACATGAAGAAACTCTTGAGAAACGATGATGAAAACCGACCAAGATTC
ACAAAAGCGAACACACAAAGAAGAACAGACGAAAACGAGAACAGAAAAAC
AAGAAAAGCGAAAGAAAAGATCTACCGTTTGGAGCGGCCGAGCAGGATTG
CACTTTCGCTTTACAACTGGATCCGAAATACACGAAAGCTTTGTTGCGGA
GAGCGACTGCTCGTTTGAAACTGAAAAAGTGGAAGATGGCTTTAGAGGAT
TTCAACAATGTTTTGGAAGAAGAGCCGAGCAATAAACAAGCTGTCACTGA
GATAAAGAACATCCAAAAGCAGATATTTTACGCCAATCGGGGCATGGCTT
TGTTGAAAATGGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025272XLOC_025272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041277-exon-sc0002782-1575043694:17582..17628TCONS_00041277-exon-sc0002782-1575043694:17582..17628Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:16553..16745TCONS_00041277-exon-sc0002782-1575043694:16553..16745Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:15862..15960TCONS_00041277-exon-sc0002782-1575043694:15862..15960Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:14671..14792TCONS_00041277-exon-sc0002782-1575043694:14671..14792Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:14076..14256TCONS_00041277-exon-sc0002782-1575043694:14076..14256Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:13273..13367TCONS_00041277-exon-sc0002782-1575043694:13273..13367Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:12398..12492TCONS_00041277-exon-sc0002782-1575043694:12398..12492Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1575043694:11608..11833TCONS_00041277-exon-sc0002782-1575043694:11608..11833Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:17582..17628TCONS_00041277-exon-sc0002782-1510915933:17582..17628Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:16553..16745TCONS_00041277-exon-sc0002782-1510915933:16553..16745Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:15862..15960TCONS_00041277-exon-sc0002782-1510915933:15862..15960Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:14671..14792TCONS_00041277-exon-sc0002782-1510915933:14671..14792Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:14076..14256TCONS_00041277-exon-sc0002782-1510915933:14076..14256Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:13273..13367TCONS_00041277-exon-sc0002782-1510915933:13273..13367Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:12398..12492TCONS_00041277-exon-sc0002782-1510915933:12398..12492Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1510915933:11608..11833TCONS_00041277-exon-sc0002782-1510915933:11608..11833Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:17582..17628TCONS_00041277-exon-sc0002782-1491911889:17582..17628Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:16553..16745TCONS_00041277-exon-sc0002782-1491911889:16553..16745Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:15862..15960TCONS_00041277-exon-sc0002782-1491911889:15862..15960Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:14671..14792TCONS_00041277-exon-sc0002782-1491911889:14671..14792Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:14076..14256TCONS_00041277-exon-sc0002782-1491911889:14076..14256Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:13273..13367TCONS_00041277-exon-sc0002782-1491911889:13273..13367Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:12398..12492TCONS_00041277-exon-sc0002782-1491911889:12398..12492Clytia hemisphaericaexon
TCONS_00041277-exon-sc0002782-1491911889:11608..11833TCONS_00041277-exon-sc0002782-1491911889:11608..11833Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041277-proteinTCONS_00041277-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002782supercontigsc0002782:11608..17628 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.5817	27.0486	11.5927	10.4939	6.80685	5.23601	7.33458	8.94747	11.0511	10.758	14.6411	13.2944	14.552	19.4459	26.125	22.6552	15.2464	18.7263	16.859	12.6544	15.6038	15.1214	31.3116	24.3796	16.9395	17.4835	10.7016	13.7663	19.0636	22.2918
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR025986RPAP3-like_C
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041277 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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