XLOC_025271 (gene) - C. hemisphaerica

Overview
NameXLOC_025271
Unique NameXLOC_025271
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002782:1843..6323+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025271 ID=XLOC_025271|Name=XLOC_025271|organism=Clytia hemisphaerica|type=gene|length=4481bp|location=Sequence derived from alignment at sc0002782:1843..6323+ (Clytia hemisphaerica)
GGTTTACTCAGTTGATAGCCAATAGATTctcatcattttcttttttctct tttgtagACTGCAAAGGAAGGTGTTAATCAACCAGGTAACTTGAAATTAG TTTTTGATACTAAAATGCTGTCTGGGCTCAAATCACTGCTTGTTCTATTC ACATCTCTAGATTCTTCATCCATGCATGAATAATAAGAAATTGCATTCAT TCCAGTTGTCtgctcctttgtttttattagaTTATTTTATTGCTGCAATC TACATTtcttgtttcaatattttttagtgTTTATTGGCGCAGATTCCCAG AAATTCCCTGAGCAAAAAGTAAGTTTACGTTTACTTTCTGGGCAAAGTTG CTCTACATTATACTGAAATGTTAACAATGTTGGTCTTAATTTAATGGAAC AGAATTGCTTTTAGGAAAGAAGTCTTTATATGAATGTTTAATTCTTTATG GAACTCTAATTAGTTACTTATGAGGATGCATATGCACACTGTCGACATCA AATGTTTATAaatctttctaaattttatCATAACATTTTTAGATCAACGA AGCTCAAGGAAAACAAGCACCAATTNAAATGGTActgtaatttcaatttt ctcaacGGTCCACataaacaaagaaacaaaagtgaaagtaaaaatGTCTC TCTGAATTTTATGAGTTAGTAAGCCAACTCAGTATTTCatagttttttat taaaaaggacTTTCCAAATCAAAAGAGCCATGTTTATgcattttgaattg aattgaatatattttcgctacAACGCAGCAGGATAATCCCTTACAAAAAA TAGTAGATtactctaatacaatggggaacctagaagaaactgaaaaattg ttacataactaaagaaaaaaaaaatgaataaacgattatGCATGctaaaa atttaagttttacTCAGTTGATAGCCAATAGATTctcatcattttctttt ttctcttttgtagACTGCAAAGGAAGGTGTTAATCAACCAGGTaacttga aatttgtttttgatacTAAAATGCTGTCTGGGCTCAAATCACTGCTTGTT CTATTCACATCTCTAGATTCTTCATCCATGCATGTTTAATAAGAAATTGC ATTCATTCCATTTGTCtgctcctttgtttttattagaTTATTTTATTGCT GCAATCTACATTtcttgtttcaatattttttagtgTTTATTGGCGCAGAT TCCCAGAAATTCCCTGAGCAAAAAGTAAGTTTACGTTTTCTTTCTGGGCA AAGTTGCCCTACATTATACTGAAATGTTAACAATGTTGGTCTTTAATTTA ATGGAACAGAATTGCTTTTAGGAAAGAAGTCTTTATATGAATGCTTAATT CTTTATGGAACTCTAATTAGTTACTTATGAGGATGCATATCACACTGTCG ACATCAAATGTTTATAaatctttctaaattttatCATAACATTTTTAGAT CAACGAAGCTCAAGGAAAACAAGCACCAATTGGAAATAACCATTTGAACG GTGGAATGCCTGAAGCATATATGTCTGCAAGTGGTTATTACGCTAACAAC ACTGGCTTTCCAGCCATGTCTTTCCCAAATTTTACGCAACCAGCTCAGTG GTCAACTGCTACAAACAATGCACCTCCACCAAATACTCAAAACTTTGATC ATTCTGCTGCCGCAGCAATGCCCTATAGCACTATGAACGCTGCACCTAAC CCCTCTGCAAATGGGGATGCTCCTCCGCAAAACCCTCAGTATGTTACTGC AGATCATTTGTTTAACCAGAACAATTCTACCTATCAAAATGCTTTTTCTG CTGCACCATTCATGAATGGAAGCTGGTCGTACTTTAACAACCCTAGCtct tatttttttccaaccGGAAATGGTGATTTGAACTTGAATTGGGGTACTGC TGCTCCAACAGATAATCCAAATAATGCTTTGTTTCAAGATCTTTACAAGC CACCTCCGGCACCTGCAGAAGTAGAAAAGCCTAAGAACGAGGCTGCTCCA CCAACTGAACTGTCGTCAAGTTTTGAGAAGAGTGAAATTAAGCCTCCTGT TTCTGCTGTTTCAGTAGAGCAGGTTGAACAATCTTTGTCTTCAATGACTG TAAACCCTCCTGAAAAGGAAGTTGAAAATAACCTTGAAACTCCCGTTGTT GCTCCAACACCTGCTAGTCTGCCTCCAAGTAGCACTGCCGTTAGTGCACC TGTGAAACATGTTAGCTCAGCTCCTGCTCCACCTTCTAAACCTACCGGAC ACTCCAATGCACCAGCCAAGCCCATGTCGTGGGCATCTGTTGCAAGTAAA CCTGCTTCGAGTAAACCTCCACCGAAGAAGGTTCCACCTAAGACTGTCGC ACCAGTCACAAATAGTAAACCAAGTTATTCTACGCAACTAGGAACTGCCA ATAATAACAAAGGAAAGCAACAACAACCTTCTGGAGGACGTTGGTCTCGC CAAAACCAGGGAAACCAGAACAGTAGTAATGCTGGAATTGATAATACTGT TGCTGTGCCTAATGATAGTCATTTAGACATTAACCGAATGAAGGATAACT CGCCATTGTTGAAGAAATTGATGCATAAGTATAATTTTAATCCGAGAGAT TTGGCTATTGATATGAAGAACGCAAGGTTTTTTATTATTAAGAGTTATAG TGAGGATGATATTTTCCGTTCAATTAAGTATTCTAGTTGGACATCTACCG AGCATGGAAACCGTCGCTTGAATGATGCATTCACTGCCCAAGAGAAAACC GGTGTCAAGACACCAATTTATCTTTTGTTCAGTGTTAATAGCAGTGGACA TTTTTGCGGTGTGGCCGAAATGAAATCCAATGTCGACTTTGATGTCGAGA CTGGAATTTTTGTTCAAGATAAATGGAAGGGACGTTTTGATGTTCGTTGG ATTTATGTGAAGGATGTGCCCAACAATACATTACGTCACATCCGTTTGGA AAATAATGAGAACAAACCAGTGACCAATTCTCGTGACACTCAGGAGGTCC ATCCTGACAAGGCGAAACAAGTATTGAAAATTATTCATAATTACAAGGCG CAAACCTCAATCTTTGATGATTTCTCTCATTACGAGAAGAGACAAGAAGA AGATGCCAAATTGAGAGTAAGTGACAattcttttctttctctttgAGCTT CTGTAAACCTGCACCCCTTTGATAGATTCTTTCTACGTTgattttcattg tcttttactTTGCATAAGGGAAAGTTCTTACAGGTCTTTATTATGTTTAA CTCGTTTTGAACAGGCTAACCTCTTCATTAGTCAGAAAATAACGTGGAAT AGTCAAAGTGAAATCTCCTCTGAAAAAAATCctcttttcaattttgattt gatgTCCACCACAATTGTTTTAGcccttataaaaaagcattatcgttttt tgaattaaattttaacaaatgcCACAAAAAGTGCTGGTTAAAGTTATTTT GGACTAATTTTTGTAGCCAATTTTTGTAGCCAATTGCTACCCTTAGGTGC CatccgtttattaatttttagctGATAAAAAGGTCTTTCCCGGTCAGCCC TAACCAACGCATTAGACAcctaaaagttatgttttagatttttgcagatt tggtcccaaaaatattaaaatgcaTTAACATTTGAATCACAACAAAGCTG CTCGATTCCTTCTCCGGCATTCTATACTACCCCACTGAGGTAATCTGGAA AGCCTTTTAAAGTCCCAAATTAAAGTCAGTCAATCAAATTAGTAATTAAA TCTAATGGAACTTGCTGGCTCAATAGTAAACAGGGATTGACAAATtaatt ctcttttttctttcagagcAAAAAGATGCCAGAACCAAATctttaaattg ttttgtttcattggaaaatttttcaccTCAATTATACAATGGTCATCTCA AAAGGAGTGTTGTTTTTGATTTATTGGGTAAttataaaattattataaaa caaCAATCAAGTCTATTGTAATTTGAATAATATGTTGTATGAATAAGCAT AATGAAAATGAATCGCTTACTAGGGGACAGCATCATCATTCACAAAACTT TCCCCTTTTTGTGTTCAGTTTTGTTGTTTACCTTCGTTTTCTCTCCGTCT CCTCGTTTGCGTTGTAGTAAGTTTGTCATACACTGCATCTCTCATATTTC ATACGTTTGAAAAGTGTTCGAAGATCCCTCTTATCATATCAAAGTACCTG TCCATGCTGTCCCCTCGgtatttgataaatttgaattgcttttttatttc ttgctAAAACTTTTGTCAACATCGCTATATGCTTACGTTATGGGAACATC TCCACCATCCATCAAATGAGTTATGAAATAATAACAAACTCGTTTGATCC TCAAATGACGAAtaagaaaaagaacaaaagaacatGTGAAAGTTTTCGTT CTGTCTTTTATCCTTCGACACAGGTTTTAAGATTTATTCCCTAGTTTACT CTGACGTTTTTTGTAGAACCCATCCCTTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041273TCONS_00041273Clytia hemisphaericatranscript
TCONS_00041274TCONS_00041274Clytia hemisphaericatranscript
TCONS_00041275TCONS_00041275Clytia hemisphaericatranscript
TCONS_00041276TCONS_00041276Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041274-proteinTCONS_00041274-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002782supercontigsc0002782:1843..6323 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
75.66 69.47 28.9 25.17 127.64 99.68 138.02 154.1 69.89 107.78 86.65 64.68 123.28 117.81 81.31 104.37 78.01 91.73 92.59 87.05 95.65 95.29 109.72 113.5 106.07 116.05 151.97 142.84 186.08 178.13