XLOC_025111 (gene) - C. hemisphaerica

Overview
NameXLOC_025111
Unique NameXLOC_025111
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002704:13561..18612+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025111 ID=XLOC_025111|Name=XLOC_025111|organism=Clytia hemisphaerica|type=gene|length=5052bp|location=Sequence derived from alignment at sc0002704:13561..18612+ (Clytia hemisphaerica)
GGGGACTTGTTTGGATTCATGAATAAAATTCAGCGTGTCTAGTCTAATAT GAAACATAAAAGGAAaaagtattttcgtttcaatgAAGCAAAGAAATTCT AGGATTTGTCTTTTAACTTGattgattttatttctttaatccTTAGGAAA TGGAGATATACAAAAACTTTCTTAAGACACTAAATATACTTTCAAAGGAA AGTTTTGAAGCTTTTGTTGACTTTTCAACAGCGATATTATTGGAAATTGG AAACAATGACACTTTCCATGacaatcttttatttttggaTAGTGATCGTC TTTCGGTTTACCCAGAAGATAAAGTATCCTCAAATTTGATACCAGGTAAG GTTATTTCTTCTCAAATTCCATTCCTGTATTCCGTATTTTACAGTATAGA GCACATTTTGCTTTGTATcatgtttattttcatttttctctctAAATCAT GATTCAAGCAAATTAACAACACCAAAATACgattttattattagtatttT GTTGTTTGAATCATGCTTATCTTATTTTATTACATATTTGACCTTTGTTT GCTctttactttttgacataatttatCTTCggtgttctcataaaaaagaa tGTACGATTTTAACCCGGGGGAAGGGCGCCTCGAAACCCGCTTAAGTATT ACTACGTTTTACACCAAGAATGGAAGTgtctttttccctttttcactAAT ACAGTTGTGTTGGTTGACTTTtgattttgtacaatttttgtTTAGACATT CAATTGTGTGAAGGCAAAACCTCTTTAAAGACTACAGGCGATGGCAACTG TTTGTTTAACAGCATCAGTATTCTTTTGACTGGCGAGGAAACATTGTCGG TTGAATTGAGATTGCGTACTTGTTTGGAACTTGCTTTCAACATAAACTTT TATGCAACACATGCAATTTTCCAGCAgcaaataaaaaccaaaaatgGAAA AGCATTTTATAAAGCTGAAGACCTGTTTGACACTGTAGCCTTTGGAAAAA CGTCGTCTAAAGCTATCGATAAAGAAGGATTTCATAAAGCTTTGGAAATT GAAATCATGCAGACCTCATACGACGGAAAGTTTTCGGGTATCCTGCAAGT AGCAGCTTTATCTTCAGTTATCGGGTGCCCCATAAACATGGTTTATCCGA ATCAAAACTTCCATCTCCTTACAATGTTTCAAGGTTTGATATCACCGCGA AATGAATGTTGTCCGAAACAAATAACTCTAATGTGGAGCTGTACAAATGG ATGTTTAGAATTAGAAAAATTTACTGCCAATCACTTTGTGCCTTTGATAG ACAAACCCAAGACAAACTATCCAGTCTCTGATGTCTTAGTTGACCAGACG AAAACCATCGTGAATTACTATCCTCGTAAAAGAAAGGCTCCAGAAGTAAG TGAAGATGAGCTTCCCTTCGAAATGGATAAAGAGTGGTATATAAAAGTTG GTAGAAATGACCTTTCCAACATAAAGAGAACTGAATCCCGGAACTCTGGA AATTGTAAGTTATCCGCATTTTTATAACCATCGCCCGTTCGTATCAGACC TCTGaactgttttgtttttatttccaaAAGCTTCACAtcgtatatttttt ataagcatagtgtaccaaagctaaaaaaaattttttcagcttTCTAAAAC ATTGATCTTACTTTGTTTGGTAACTTTTAAAGCGTGTGGCGTTAAATTAC TAAAACTAAACTATAGTCTTCGAAGTCTAATCAATCGAAAATAAATTTCC TGacttaaaatttcgaaatcttcaaataataaaaaaaattcaacaataat aataatttcaaatttttaactgTTAATTTGGAAATAAAATACACTGATAT GATATTATCAAATccatcaaatttcatcaaagTAGTAGTCGATTTCGTAA TCGAACTCGAAAACAGctgtaaataaataataaatgtagATAGCgataga ttttttaaataaaagatttaTTCTTCCTGTACATGATTAATGAATTCTCT ATCATACAAAGTATGCCGACTGAAAAGtgaaagtcagtttttttttgttt tttttttcaaagagccATGCGaaaacaatgttgtttttaCATCTCAAGTA GAAACaaatgtattttatttttctggGATTTTTCTGCAGTTTTacaactt ttgtttttaagCAACCTTTTTAAAGAACAAGTATTCTATTTTAAAGGGAT TTTAAATAAACGTCCCCTTCGAACAAACAGCTCCCACCTCCCACCTCCCT CTGAGAAACTGTTGTATGAAGATATCCACATATACTTTTTATCGTACTCT TTgagattgaaaaaaaagtttctctttttttagatTCACCTCAAGCGCAT CACAAAGACGTGACATCTTGTATTGAAGAATTAAAGACGCATTCCTCGAC TCATCTAAAAGCTATTGCAGAAGTTGGTCAGTACATGAAAGACAATGGAC CTTTGTTGGAAACATCGAAGGTTATCAAAAAGTATCAAGAGATAAAAAAG TTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAATGTTTGAGATTTTAGC AAAGCATCTACCGGTATGTGTGATATACCTCAGTAGAAAAGCATTTCTCT ACGAGAACCTCTATCAAGAGGTGATTGACTCTGTTATGAAATTTTCGACA AATTCTATTGATCAAGAAGATTTGAATGACcacattgaaagtaaaattgg tGAAATCTATAAAGACGTTATCGAGTACATGGACACTAAAAGAGATAGAG ATGCTTTTAAAGCTGTCATTTCGCAAATAACGAGTATAAGATTCGCAGCT AAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCCGGAATTCTTCACAATC CTTGAAAGGAAATCTGATCAAGTATAAAGACATTAAATTGAGTTCCAAAA CAGTCAGAAATGACATGACGGTTAACCAGCAACATAAATTCAACGGACGA ATTGCAACAGcaagaaaatttaaagaaattaaggtaattaaattttgata ttttctttattttttgttattttgtctAAGTAAAATCTGTAGAATGATTG AAGAAGGGGAGAATGGTAGAGAAAATGTGATTGACAAAAGTTTCCGGAGG GATATGTTTTAGATTTGTCTCAGATTTGTCTCAATATTTTTAGCCTAACA CATGAGGTTTTTGGTAATCCTTGCCCCCTGATTAGTATCCTTGACTAATA TAATATCGAACATTAAAGCGCGGAAAACTCACGCATTCCTCCGTATTGAA TTTTGAGTAATCTGTTACTTTTCTAAGTTTACGATTTTATCAATACTTTC AAAAGCGTCTTTGCGCTCTGGCGCTCTCAAGATTAAGTAACATTATTTTC gacttctttttgacttttcacaTCTCTGTAAACAATTTATTTGTGGTGAT TAATAGCACCGCAATGTCATTCATCTTTTTAACCTAGcccttttgaaaat attgttttgTCCGCTGCTATCTTCGGTCAAGCTAATGTTGACAAGTCGTC TGTGCGACGGCCTTGGCCGCTAGTAAACAAAAGGCGAAGAGAAGTATACA ATTACTTCGAAGGCCCATCACTTGATTTTTCGatcaaactttatttttca attttagacgATCGCCGCCGGAAGAGGAGCTCCACTCAAATGCGTACAGT TTCCCGAATTGACAGTCCTTCTGGAGAACATATTTGCCGAGAGCGGTCTT GAAAGCCATCCCAGGTTGACAGACGATATTTTGTACCGTGCAACGAGCAA TGCATTGACGATGACAAAAGCCCGCGAAATTCTTTTATCACTTGCGccgg aaaattttaaaatttgtttatcgACTTGTTTCAACTACACACAAAATTTT AAGGCCGGGACAGCTCAGGCTAAACGTCATCACGAGGGTAGAGATATTAA TGCTTGCATCTCTCTTCATCCACCTCCAAGAATTGGTACAGAAAAACCTT CGCCTAATTTACATTGGTCTTCCTGTAATGTCAGCCTCATGTTGTCAAAT CGTGTAGATGACACCATTTTTGATTCAAAGGATGCCAAGTCTATCGTTTG TGCCGACATTTCTCCGGTTCAAAGACCGTCAAAAACATGGAAAAAGAAGG AAGGGATATTACTAGACCATGAATGGAACCAGAGCAGAATCAATGCAGTA ACACCTATGGCTCATTTGTTTCTTGACGACTCCAAAAACGAGGATTCTCA CTCTATTCTTAGATCAGGTTAGATATTCTCATTATtcagaaaacattttc aaaatcaacaaaacttACGCTTACtgtaagttcttataaaaagtatatTA GTCTCATTtctgatttttaagaaatatatGATTACCCCCTGAATCGTTAT TTGatcttttataatattttctctCTCCAAGTGCGTGTaaacctttcaat caaaaaaagagagaaaaagaaacTTAAATATCTCAATGAAAAAAAAGCTT ACAAAATTTCCCTCAAATTGTTACAGccgtctttttttataagaacaaac aataagaacataaggcttcgatggccaaaattttaagaacaagttaaaaa catttattttttcttctttttattgatgttttttgGGCCATGGTTGAGTT CATATAGTATTATAGTAACACTCTTAGTCTTCAGAGCTTTCGAAAGCGAT TTGCTAAACAAAATTATCATATTTTCATCACTAGGAAAAGCTGCGGTGTT GATTAATCTAAGCTATTTCGAACCATCAACGACGTTTCGATGCTTTAACG AGGTATTCAGTCTCCTGACAAACCCTTCATTAAATGGATGCTTCCTACGC AATGGAGAACTTAAGAAGAACCTTGTAAATATTGTAGACAATGGTCCAGG TGAAGCTCCTAGCAGTGCCATGGTTCAGATGCTACTTATAAGAACGAGAA AGTTTCTCAAAATGGAAAGTGCTTGTCAAATGTCATTCAGCGAATATCAC TCGAAAAGAAACTACGTCGAGAGGGTACACTCTCAAGAAAACCTTGCACT CTCAAGACATGGCAAGTTTAGCAGCACCATGGTTCATAGCAAGAAAGAAA AT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041099TCONS_00041099Clytia hemisphaericatranscript
TCONS_00041100TCONS_00041100Clytia hemisphaericatranscript
TCONS_00041101TCONS_00041101Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041100-proteinTCONS_00041100-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002704supercontigsc0002704:13561..18612 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.02 0.01 0.01 0.8 0.83 0.95 1.95 0.91 0.73 1.62 1.18 1.01 0.92 0 0 0.01 0 0 0.01 0.02 0.02 0.03 0.04 1.27 3.39 0.02 0 0.03 0.01