TCONS_00041100 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041100
Unique NameTCONS_00041100
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4425

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041100 ID=TCONS_00041100|Name=TCONS_00041100|organism=Clytia hemisphaerica|type=transcript|length=4425bp
GGGGACTTGTTTGGATTCATGAATAAAATTCAGCGTGTCTAGTCTAATAT
GAAACATAAAAGGAAaaagtattttcgtttcaatgAAGCAAAGAAATTCT
AGGATTTGTCTTTTAACTTGattgattttatttctttaatccTTAGGAAA
TGGAGATATACAAAAACTTTCTTAAGACACTAAATATACTTTCAAAGGAA
AGTTTTGAAGCTTTTGTTGACTTTTCAACAGCGATATTATTGGAAATTGG
AAACAATGACACTTTCCATGacaatcttttatttttggaTAGTGATCGTC
TTTCGGTTTACCCAGAAGATAAAGTATCCTCAAATTTGATACCAGGTAAG
GTTATTTCTTCTCAAATTCCATTCCTGTATTCCGTATTTTACAGTATAGA
GCACATTTTGCTTTGTATcatgtttattttcatttttctctctAAATCAT
GATTCAAGCAAATTAACAACACCAAAATACgattttattattagtatttT
GTTGTTTGAATCATGCTTATCTTATTTTATTACATATTTGACCTTTGTTT
GCTctttactttttgacataatttatCTTCggtgttctcataaaaaagaa
tGTACGATTTTAACCCGGGGGAAGGGCGCCTCGAAACCCGCTTAAGTATT
ACTACGTTTTACACCAAGAATGGAAGTgtctttttccctttttcactAAT
ACAGTTGTGTTGGTTGACTTTtgattttgtacaatttttgtTTAGACATT
CAATTGTGTGAAGGCAAAACCTCTTTAAAGACTACAGGCGATGGCAACTG
TTTGTTTAACAGCATCAGTATTCTTTTGACTGGCGAGGAAACATTGTCGG
TTGAATTGAGATTGCGTACTTGTTTGGAACTTGCTTTCAACATAAACTTT
TATGCAACACATGCAATTTTCCAGCAgcaaataaaaaccaaaaatgGAAA
AGCATTTTATAAAGCTGAAGACCTGTTTGACACTGTAGCCTTTGGAAAAA
CGTCGTCTAAAGCTATCGATAAAGAAGGATTTCATAAAGCTTTGGAAATT
GAAATCATGCAGACCTCATACGACGGAAAGTTTTCGGGTATCCTGCAAGT
AGCAGCTTTATCTTCAGTTATCGGGTGCCCCATAAACATGGTTTATCCGA
ATCAAAACTTCCATCTCCTTACAATGTTTCAAGGTTTGATATCACCGCGA
AATGAATGTTGTCCGAAACAAATAACTCTAATGTGGAGCTGTACAAATGG
ATGTTTAGAATTAGAAAAATTTACTGCCAATCACTTTGTGCCTTTGATAG
ACAAACCCAAGACAAACTATCCAGTCTCTGATGTCTTAGTTGACCAGACG
AAAACCATCGTGAATTACTATCCTCGTAAAAGAAAGGCTCCAGAAGTAAG
TGAAGATGAGCTTCCCTTCGAAATGGATAAAGAGTGGTATATAAAAGTTG
GTAGAAATGACCTTTCCAACATAAAGAGAACTGAATCCCGGAACTCTGGA
AATTGTAAGTTATCCGCATTTTTATAACCATCGCCCGTTCGTATCAGACC
TCTGaactgttttgtttttatttccaaAAGCTTCACAtcgtatatttttt
ataagcatagtgtaccaaagctaaaaaaaattttttcagcttTCTAAAAC
ATTGATCTTACTTTGTTTGGTAACTTTTAAAGCGTGTGGCGTTAAATTAC
TAAAACTAAACTATAGTCTTCGAAGTCTAATCAATCGAAAATAAATTTCC
TGacttaaaatttcgaaatcttcaaataataaaaaaaattcaacaataat
aataatttcaaatttttaactgTTAATTTGGAAATAAAATACACTGATAT
GATATTATCAAATccatcaaatttcatcaaagTAGTAGTCGATTTCGTAA
TCGAACTCGAAAACAGctgtaaataaataataaatgtagATAGCgataga
ttttttaaataaaagatttaTTCTTCCTGTACATGATTAATGAATTCTCT
ATCATACAAAGTATGCCGACTGAAAAGtgaaagtcagtttttttttgttt
tttttttcaaagagccATGCGaaaacaatgttgtttttaCATCTCAAGTA
GAAACaaatgtattttatttttctggGATTTTTCTGCAGTTTTacaactt
ttgtttttaagCAACCTTTTTAAAGAACAAGTATTCTATTTTAAAGGGAT
TTTAAATAAACGTCCCCTTCGAACAAACAGCTCCCACCTCCCACCTCCCT
CTGAGAAACTGTTGTATGAAGATATCCACATATACTTTTTATCGTACTCT
TTgagattgaaaaaaaagtttctctttttttagatTCACCTCAAGCGCAT
CACAAAGACGTGACATCTTGTATTGAAGAATTAAAGACGCATTCCTCGAC
TCATCTAAAAGCTATTGCAGAAGTTGGTCAGTACATGAAAGACAATGGAC
CTTTGTTGGAAACATCGAAGGTTATCAAAAAGTATCAAGAGATAAAAAAG
TTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAATGTTTGAGATTTTAGC
AAAGCATCTACCGGTATGTGTGATATACCTCAGTAGAAAAGCATTTCTCT
ACGAGAACCTCTATCAAGAGGTGATTGACTCTGTTATGAAATTTTCGACA
AATTCTATTGATCAAGAAGATTTGAATGACcacattgaaagtaaaattgg
tGAAATCTATAAAGACGTTATCGAGTACATGGACACTAAAAGAGATAGAG
ATGCTTTTAAAGCTGTCATTTCGCAAATAACGAGTATAAGATTCGCAGCT
AAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCCGGAATTCTTCACAATC
CTTGAAAGGAAATCTGATCAAGTATAAAGACATTAAATTGAGTTCCAAAA
CAGTCAGAAATGACATGACGGTTAACCAGCAACATAAATTCAACGGACGA
ATTGCAACAGcaagaaaatttaaagaaattaagacgATCGCCGCCGGAAG
AGGAGCTCCACTCAAATGCGTACAGTTTCCCGAATTGACAGTCCTTCTGG
AGAACATATTTGCCGAGAGCGGTCTTGAAAGCCATCCCAGGTTGACAGAC
GATATTTTGTACCGTGCAACGAGCAATGCATTGACGATGACAAAAGCCCG
CGAAATTCTTTTATCACTTGCGccggaaaattttaaaatttgtttatcgA
CTTGTTTCAACTACACACAAAATTTTAAGGCCGGGACAGCTCAGGCTAAA
CGTCATCACGAGGGTAGAGATATTAATGCTTGCATCTCTCTTCATCCACC
TCCAAGAATTGGTACAGAAAAACCTTCGCCTAATTTACATTGGTCTTCCT
GTAATGTCAGCCTCATGTTGTCAAATCGTGTAGATGACACCATTTTTGAT
TCAAAGGATGCCAAGTCTATCGTTTGTGCCGACATTTCTCCGGTTCAAAG
ACCGTCAAAAACATGGAAAAAGAAGGAAGGGATATTACTAGACCATGAAT
GGAACCAGAGCAGAATCAATGCAGTAACACCTATGGCTCATTTGTTTCTT
GACGACTCCAAAAACGAGGATTCTCACTCTATTCTTAGATCAGGTTAGAT
ATTCTCATTATtcagaaaacattttcaaaatcaacaaaacttACGCTTAC
tgtaagttcttataaaaagtatatTAGTCTCATTtctgatttttaagaaa
tatatGATTACCCCCTGAATCGTTATTTGatcttttataatattttctct
CTCCAAGTGCGTGTaaacctttcaatcaaaaaaagagagaaaaagaaacT
TAAATATCTCAATGAAAAAAAAGCTTACAAAATTTCCCTCAAATTGTTAC
AGccgtctttttttataagaacaaacaataagaacataaggcttcgatgg
ccaaaattttaagaacaagttaaaaacatttattttttcttctttttatt
gatgttttttgGGCCATGGTTGAGTTCATATAGTATTATAGTAACACTCT
TAGTCTTCAGAGCTTTCGAAAGCGATTTGCTAAACAAAATTATCATATTT
TCATCACTAGGAAAAGCTGCGGTGTTGATTAATCTAAGCTATTTCGAACC
ATCAACGACGTTTCGATGCTTTAACGAGGTATTCAGTCTCCTGACAAACC
CTTCATTAAATGGATGCTTCCTACGCAATGGAGAACTTAAGAAGAACCTT
GTAAATATTGTAGACAATGGTCCAGGTGAAGCTCCTAGCAGTGCCATGGT
TCAGATGCTACTTATAAGAACGAGAAAGTTTCTCAAAATGGAAAGTGCTT
GTCAAATGTCATTCAGCGAATATCACTCGAAAAGAAACTACGTCGAGAGG
GTACACTCTCAAGAAAACCTTGCACTCTCAAGACATGGCAAGTTTAGCAG
CACCATGGTTCATAGCAAGAAAGAA
Run BLAST on NCBI

protein sequence of TCONS_00041100-protein

>TCONS_00041100-protein ID=TCONS_00041100-protein|Name=TCONS_00041100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
MKDNGPLLETSKVIKKYQEIKKLSPKSKMKSKEMFEILAKHLPVCVIYLS
RKAFLYENLYQEVIDSVMKFSTNSIDQEDLNDHIESKIGEIYKDVIEYMD
TKRDRDAFKAVISQITSIRFAAKLQGVQSRVGIRNSSQSLKGNLIKYKDI
KLSSKTVRNDMTVNQQHKFNGRIATARKFKEIKTIAAGRGAPLKCVQFPE
LTVLLENIFAESGLESHPRLTDDILYRATSNALTMTKAREILLSLAPENF
KICLSTCFNYTQNFKAGTAQAKRHHEGRDINACISLHPPPRIGTEKPSPN
LHWSSCNVSLMLSNRVDDTIFDSKDAKSIVCADISPVQRPSKTWKKKEGI
LLDHEWNQSRINAVTPMAHLFLDDSKNEDSHSILRSG
Run BLAST on NCBI

transcript from alignment at sc0002704:13561..18609+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041100 ID=TCONS_00041100|Name=TCONS_00041100|organism=Clytia hemisphaerica|type=transcript|length=5049bp|location=Sequence derived from alignment at sc0002704:13561..18609+ (Clytia hemisphaerica)
GGGGACTTGTTTGGATTCATGAATAAAATTCAGCGTGTCTAGTCTAATAT
GAAACATAAAAGGAAaaagtattttcgtttcaatgAAGCAAAGAAATTCT
AGGATTTGTCTTTTAACTTGattgattttatttctttaatccTTAGGAAA
TGGAGATATACAAAAACTTTCTTAAGACACTAAATATACTTTCAAAGGAA
AGTTTTGAAGCTTTTGTTGACTTTTCAACAGCGATATTATTGGAAATTGG
AAACAATGACACTTTCCATGacaatcttttatttttggaTAGTGATCGTC
TTTCGGTTTACCCAGAAGATAAAGTATCCTCAAATTTGATACCAGGTAAG
GTTATTTCTTCTCAAATTCCATTCCTGTATTCCGTATTTTACAGTATAGA
GCACATTTTGCTTTGTATcatgtttattttcatttttctctctAAATCAT
GATTCAAGCAAATTAACAACACCAAAATACgattttattattagtatttT
GTTGTTTGAATCATGCTTATCTTATTTTATTACATATTTGACCTTTGTTT
GCTctttactttttgacataatttatCTTCggtgttctcataaaaaagaa
tGTACGATTTTAACCCGGGGGAAGGGCGCCTCGAAACCCGCTTAAGTATT
ACTACGTTTTACACCAAGAATGGAAGTgtctttttccctttttcactAAT
ACAGTTGTGTTGGTTGACTTTtgattttgtacaatttttgtTTAGACATT
CAATTGTGTGAAGGCAAAACCTCTTTAAAGACTACAGGCGATGGCAACTG
TTTGTTTAACAGCATCAGTATTCTTTTGACTGGCGAGGAAACATTGTCGG
TTGAATTGAGATTGCGTACTTGTTTGGAACTTGCTTTCAACATAAACTTT
TATGCAACACATGCAATTTTCCAGCAgcaaataaaaaccaaaaatgGAAA
AGCATTTTATAAAGCTGAAGACCTGTTTGACACTGTAGCCTTTGGAAAAA
CGTCGTCTAAAGCTATCGATAAAGAAGGATTTCATAAAGCTTTGGAAATT
GAAATCATGCAGACCTCATACGACGGAAAGTTTTCGGGTATCCTGCAAGT
AGCAGCTTTATCTTCAGTTATCGGGTGCCCCATAAACATGGTTTATCCGA
ATCAAAACTTCCATCTCCTTACAATGTTTCAAGGTTTGATATCACCGCGA
AATGAATGTTGTCCGAAACAAATAACTCTAATGTGGAGCTGTACAAATGG
ATGTTTAGAATTAGAAAAATTTACTGCCAATCACTTTGTGCCTTTGATAG
ACAAACCCAAGACAAACTATCCAGTCTCTGATGTCTTAGTTGACCAGACG
AAAACCATCGTGAATTACTATCCTCGTAAAAGAAAGGCTCCAGAAGTAAG
TGAAGATGAGCTTCCCTTCGAAATGGATAAAGAGTGGTATATAAAAGTTG
GTAGAAATGACCTTTCCAACATAAAGAGAACTGAATCCCGGAACTCTGGA
AATTGTAAGTTATCCGCATTTTTATAACCATCGCCCGTTCGTATCAGACC
TCTGaactgttttgtttttatttccaaAAGCTTCACAtcgtatatttttt
ataagcatagtgtaccaaagctaaaaaaaattttttcagcttTCTAAAAC
ATTGATCTTACTTTGTTTGGTAACTTTTAAAGCGTGTGGCGTTAAATTAC
TAAAACTAAACTATAGTCTTCGAAGTCTAATCAATCGAAAATAAATTTCC
TGacttaaaatttcgaaatcttcaaataataaaaaaaattcaacaataat
aataatttcaaatttttaactgTTAATTTGGAAATAAAATACACTGATAT
GATATTATCAAATccatcaaatttcatcaaagTAGTAGTCGATTTCGTAA
TCGAACTCGAAAACAGctgtaaataaataataaatgtagATAGCgataga
ttttttaaataaaagatttaTTCTTCCTGTACATGATTAATGAATTCTCT
ATCATACAAAGTATGCCGACTGAAAAGtgaaagtcagtttttttttgttt
tttttttcaaagagccATGCGaaaacaatgttgtttttaCATCTCAAGTA
GAAACaaatgtattttatttttctggGATTTTTCTGCAGTTTTacaactt
ttgtttttaagCAACCTTTTTAAAGAACAAGTATTCTATTTTAAAGGGAT
TTTAAATAAACGTCCCCTTCGAACAAACAGCTCCCACCTCCCACCTCCCT
CTGAGAAACTGTTGTATGAAGATATCCACATATACTTTTTATCGTACTCT
TTgagattgaaaaaaaagtttctctttttttagatTCACCTCAAGCGCAT
CACAAAGACGTGACATCTTGTATTGAAGAATTAAAGACGCATTCCTCGAC
TCATCTAAAAGCTATTGCAGAAGTTGGTCAGTACATGAAAGACAATGGAC
CTTTGTTGGAAACATCGAAGGTTATCAAAAAGTATCAAGAGATAAAAAAG
TTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAATGTTTGAGATTTTAGC
AAAGCATCTACCGGTATGTGTGATATACCTCAGTAGAAAAGCATTTCTCT
ACGAGAACCTCTATCAAGAGGTGATTGACTCTGTTATGAAATTTTCGACA
AATTCTATTGATCAAGAAGATTTGAATGACcacattgaaagtaaaattgg
tGAAATCTATAAAGACGTTATCGAGTACATGGACACTAAAAGAGATAGAG
ATGCTTTTAAAGCTGTCATTTCGCAAATAACGAGTATAAGATTCGCAGCT
AAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCCGGAATTCTTCACAATC
CTTGAAAGGAAATCTGATCAAGTATAAAGACATTAAATTGAGTTCCAAAA
CAGTCAGAAATGACATGACGGTTAACCAGCAACATAAATTCAACGGACGA
ATTGCAACAGcaagaaaatttaaagaaattaaggtaattaaattttgata
ttttctttattttttgttattttgtctAAGTAAAATCTGTAGAATGATTG
AAGAAGGGGAGAATGGTAGAGAAAATGTGATTGACAAAAGTTTCCGGAGG
GATATGTTTTAGATTTGTCTCAGATTTGTCTCAATATTTTTAGCCTAACA
CATGAGGTTTTTGGTAATCCTTGCCCCCTGATTAGTATCCTTGACTAATA
TAATATCGAACATTAAAGCGCGGAAAACTCACGCATTCCTCCGTATTGAA
TTTTGAGTAATCTGTTACTTTTCTAAGTTTACGATTTTATCAATACTTTC
AAAAGCGTCTTTGCGCTCTGGCGCTCTCAAGATTAAGTAACATTATTTTC
gacttctttttgacttttcacaTCTCTGTAAACAATTTATTTGTGGTGAT
TAATAGCACCGCAATGTCATTCATCTTTTTAACCTAGcccttttgaaaat
attgttttgTCCGCTGCTATCTTCGGTCAAGCTAATGTTGACAAGTCGTC
TGTGCGACGGCCTTGGCCGCTAGTAAACAAAAGGCGAAGAGAAGTATACA
ATTACTTCGAAGGCCCATCACTTGATTTTTCGatcaaactttatttttca
attttagacgATCGCCGCCGGAAGAGGAGCTCCACTCAAATGCGTACAGT
TTCCCGAATTGACAGTCCTTCTGGAGAACATATTTGCCGAGAGCGGTCTT
GAAAGCCATCCCAGGTTGACAGACGATATTTTGTACCGTGCAACGAGCAA
TGCATTGACGATGACAAAAGCCCGCGAAATTCTTTTATCACTTGCGccgg
aaaattttaaaatttgtttatcgACTTGTTTCAACTACACACAAAATTTT
AAGGCCGGGACAGCTCAGGCTAAACGTCATCACGAGGGTAGAGATATTAA
TGCTTGCATCTCTCTTCATCCACCTCCAAGAATTGGTACAGAAAAACCTT
CGCCTAATTTACATTGGTCTTCCTGTAATGTCAGCCTCATGTTGTCAAAT
CGTGTAGATGACACCATTTTTGATTCAAAGGATGCCAAGTCTATCGTTTG
TGCCGACATTTCTCCGGTTCAAAGACCGTCAAAAACATGGAAAAAGAAGG
AAGGGATATTACTAGACCATGAATGGAACCAGAGCAGAATCAATGCAGTA
ACACCTATGGCTCATTTGTTTCTTGACGACTCCAAAAACGAGGATTCTCA
CTCTATTCTTAGATCAGGTTAGATATTCTCATTATtcagaaaacattttc
aaaatcaacaaaacttACGCTTACtgtaagttcttataaaaagtatatTA
GTCTCATTtctgatttttaagaaatatatGATTACCCCCTGAATCGTTAT
TTGatcttttataatattttctctCTCCAAGTGCGTGTaaacctttcaat
caaaaaaagagagaaaaagaaacTTAAATATCTCAATGAAAAAAAAGCTT
ACAAAATTTCCCTCAAATTGTTACAGccgtctttttttataagaacaaac
aataagaacataaggcttcgatggccaaaattttaagaacaagttaaaaa
catttattttttcttctttttattgatgttttttgGGCCATGGTTGAGTT
CATATAGTATTATAGTAACACTCTTAGTCTTCAGAGCTTTCGAAAGCGAT
TTGCTAAACAAAATTATCATATTTTCATCACTAGGAAAAGCTGCGGTGTT
GATTAATCTAAGCTATTTCGAACCATCAACGACGTTTCGATGCTTTAACG
AGGTATTCAGTCTCCTGACAAACCCTTCATTAAATGGATGCTTCCTACGC
AATGGAGAACTTAAGAAGAACCTTGTAAATATTGTAGACAATGGTCCAGG
TGAAGCTCCTAGCAGTGCCATGGTTCAGATGCTACTTATAAGAACGAGAA
AGTTTCTCAAAATGGAAAGTGCTTGTCAAATGTCATTCAGCGAATATCAC
TCGAAAAGAAACTACGTCGAGAGGGTACACTCTCAAGAAAACCTTGCACT
CTCAAGACATGGCAAGTTTAGCAGCACCATGGTTCATAGCAAGAAAGAA

Coding sequence (CDS) from alignment at sc0002704:13561..18609+

>TCONS_00041100 ID=TCONS_00041100|Name=TCONS_00041100|organism=Clytia hemisphaerica|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0002704:13561..18609+ (Clytia hemisphaerica)
ATGAAAGACAATGGACCTTTGTTGGAAACATCGAAGGTTATCAAAAAGTA
TCAAGAGATAAAAAAGTTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAA
TGTTTGAGATTTTAGCAAAGCATCTACCGGTATGTGTGATATACCTCAGT
AGAAAAGCATTTCTCTACGAGAACCTCTATCAAGAGGTGATTGACTCTGT
TATGAAATTTTCGACAAATTCTATTGATCAAGAAGATTTGAATGACcaca
ttgaaagtaaaattggtGAAATCTATAAAGACGTTATCGAGTACATGGAC
ACTAAAAGAGATAGAGATGCTTTTAAAGCTGTCATTTCGCAAATAACGAG
TATAAGATTCGCAGCTAAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCC
GGAATTCTTCACAATCCTTGAAAGGAAATCTGATCAAGTATAAAGACATT
AAATTGAGTTCCAAAACAGTCAGAAATGACATGACGGTTAACCAGCAACA
TAAATTCAACGGACGAATTGCAACAGcaagaaaatttaaagaaattaaga
cgATCGCCGCCGGAAGAGGAGCTCCACTCAAATGCGTACAGTTTCCCGAA
TTGACAGTCCTTCTGGAGAACATATTTGCCGAGAGCGGTCTTGAAAGCCA
TCCCAGGTTGACAGACGATATTTTGTACCGTGCAACGAGCAATGCATTGA
CGATGACAAAAGCCCGCGAAATTCTTTTATCACTTGCGccggaaaatttt
aaaatttgtttatcgACTTGTTTCAACTACACACAAAATTTTAAGGCCGG
GACAGCTCAGGCTAAACGTCATCACGAGGGTAGAGATATTAATGCTTGCA
TCTCTCTTCATCCACCTCCAAGAATTGGTACAGAAAAACCTTCGCCTAAT
TTACATTGGTCTTCCTGTAATGTCAGCCTCATGTTGTCAAATCGTGTAGA
TGACACCATTTTTGATTCAAAGGATGCCAAGTCTATCGTTTGTGCCGACA
TTTCTCCGGTTCAAAGACCGTCAAAAACATGGAAAAAGAAGGAAGGGATA
TTACTAGACCATGAATGGAACCAGAGCAGAATCAATGCAGTAACACCTAT
GGCTCATTTGTTTCTTGACGACTCCAAAAACGAGGATTCTCACTCTATTC
TTAGATCAGGTTAGATGAAAGACAATGGACCTTTGTTGGAAACATCGAAG
GTTATCAAAAAGTATCAAGAGATAAAAAAGTTGTCCCCAAAATCGAAGAT
GAAGTCTAAAGAAATGTTTGAGATTTTAGCAAAGCATCTACCGGTATGTG
TGATATACCTCAGTAGAAAAGCATTTCTCTACGAGAACCTCTATCAAGAG
GTGATTGACTCTGTTATGAAATTTTCGACAAATTCTATTGATCAAGAAGA
TTTGAATGACcacattgaaagtaaaattggtGAAATCTATAAAGACGTTA
TCGAGTACATGGACACTAAAAGAGATAGAGATGCTTTTAAAGCTGTCATT
TCGCAAATAACGAGTATAAGATTCGCAGCTAAACTCCAAGGAGTCCAGAG
TAGAGTTGGCATCCGGAATTCTTCACAATCCTTGAAAGGAAATCTGATCA
AGTATAAAGACATTAAATTGAGTTCCAAAACAGTCAGAAATGACATGACG
GTTAACCAGCAACATAAATTCAACGGACGAATTGCAACAGcaagaaaatt
taaagaaattaagacgATCGCCGCCGGAAGAGGAGCTCCACTCAAATGCG
TACAGTTTCCCGAATTGACAGTCCTTCTGGAGAACATATTTGCCGAGAGC
GGTCTTGAAAGCCATCCCAGGTTGACAGACGATATTTTGTACCGTGCAAC
GAGCAATGCATTGACGATGACAAAAGCCCGCGAAATTCTTTTATCACTTG
CGccggaaaattttaaaatttgtttatcgACTTGTTTCAACTACACACAA
AATTTTAAGGCCGGGACAGCTCAGGCTAAACGTCATCACGAGGGTAGAGA
TATTAATGCTTGCATCTCTCTTCATCCACCTCCAAGAATTGGTACAGAAA
AACCTTCGCCTAATTTACATTGGTCTTCCTGTAATGTCAGCCTCATGTTG
TCAAATCGTGTAGATGACACCATTTTTGATTCAAAGGATGCCAAGTCTAT
CGTTTGTGCCGACATTTCTCCGGTTCAAAGACCGTCAAAAACATGGAAAA
AGAAGGAAGGGATATTACTAGACCATGAATGGAACCAGAGCAGAATCAAT
GCAGTAACACCTATGGCTCATTTGTTTCTTGACGACTCCAAAAACGAGGA
TTCTCACTCTATTCTTAGATCAGGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025111XLOC_025111Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041100-proteinTCONS_00041100-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041100-exon-sc0002704-1491911889:13561..16543TCONS_00041100-exon-sc0002704-1491911889:13561..16543Clytia hemisphaericaexon
TCONS_00041100-exon-sc0002704-1510915933:13561..16543TCONS_00041100-exon-sc0002704-1510915933:13561..16543Clytia hemisphaericaexon
TCONS_00041100-exon-sc0002704-1575043694:13561..16543TCONS_00041100-exon-sc0002704-1575043694:13561..16543Clytia hemisphaericaexon
TCONS_00041100-exon-sc0002704-1491911889:17168..18609TCONS_00041100-exon-sc0002704-1491911889:17168..18609Clytia hemisphaericaexon
TCONS_00041100-exon-sc0002704-1510915933:17168..18609TCONS_00041100-exon-sc0002704-1510915933:17168..18609Clytia hemisphaericaexon
TCONS_00041100-exon-sc0002704-1575043694:17168..18609TCONS_00041100-exon-sc0002704-1575043694:17168..18609Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002704supercontigsc0002704:13561..18609 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0246179	0	0.00932158	0	0	0.23149	0.00194492	0.194596	0	0	0.163906	0	0	0	0	0.012658	0	0	0.00936858	0.0245075	0.0240549	0.0290799	0.0350876	0.238285	0	0.02329	0	0.0282948	0.00951971
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041100 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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