XLOC_025094 (gene) - C. hemisphaerica

Overview
NameXLOC_025094
Unique NameXLOC_025094
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002693:3235..8000-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025094 ID=XLOC_025094|Name=XLOC_025094|organism=Clytia hemisphaerica|type=gene|length=4766bp|location=Sequence derived from alignment at sc0002693:3235..8000- (Clytia hemisphaerica)
CTTGGGAATTGAATGACAAATTTTGGTTGGTTGATTTTGGCTGCTGCACG TTTTATTTTGTTTCAAACTTTCAAGTTTTAATTAATTGTCTTGCGAACTT GATTCAGGTCACTCTCATCCTTGTTGTGCAAATACATCATGTAGATGACT GATGTTGTTTTTTTCTGAAAGCTAGATTTCCTAGAGTGTGGCTATAAACT GGCNTAATTAATTGTCTTGCGAACTTGATTCAGGTAACTCTCATCCTTGT TGTGCAAATACATCCTGTAGATGACTGATGTTGTTTTTTTCTGAAAGCTA GATTTCCTAGATAGAGTGTGGCTATAAACTGGCTAGCTAGGGTTGTAAAA TTTGAAGAATTCAACCCTCAAACATTAAAATGGGCAATCAACTTACATTA TATCGAATTCAGCTCCACCTTGACAGCTTAAAGAACCTGGAAAATTTAAG ACACCCATGATAATTCTCTCTTAAAGNATTCAGCTCCACCTTGACAGCTT AAAGAACCTGGAAAATTTAAGACACCCATGATAATTCTCTCTTAAAGCAG CTTAGCTTTTGTTTTGATTATTTTGAAAAATTTGTCCCTTTAAAAAATAT GTAAACAAACTGCAGCCATTTTGTTTCAACCCGCTGATGTAACTTTTTTG ACAAAGGCCGCCGTTTTCGCTCAGACAGCAAGCGTACACGCGTAGTTTGC ATCAAAAAATTCAACGCTTTAGTATCAGGTAATTTTGAGGAAAACGAAAA ACGAAAGTGAATGTGCGCGTGGGCTGAATAATCGAGACCAAAGTACACAA TTTTCAAGCTGGATGGATTTGATTGGTTTACCTCGTCTTGCTGCACGATT TTAATTGGTCAAACGATTTGAATACCAATGATACGACACCACGCAGGAAA ATTTTGTCTCTTTCTACCGTCCTTCTTGAAGTCATATATTGCAATAAGCT GTCTAGGAGTCTTGTAGTCAATCTCTGGTGTTACACGGTGGTAGCTGAGA TTTGCAATGGACAGTAGAATATTATTTTTGCTTGGCCTTTTGGCTGCTGT AAATTGTACAGTTCATTTCAAAGAAACATTTGATGGTAAGCCGACGGATT CATCACCTTTTTACGTGAAATTCAAATATTCCTTGAATAATATATTAGGG TTTGGCTTTCAGGCTTTGGGGTCTTTGCTTTGGTCTTTTGTTCCTTAAAT TTGCTTGGGAATGTTGTGTGTCTGACAGAAAGTGTTGCGGACAGAGGCTG GTAGTTAGTATTAGAATCAGAGGCACCTGGTAATTTTTAGCCATGGAGAA TGATATGGGATATATTAGTCAAATGAAATTTTGATAATCCCTTTCTTCAA AACAAAGATCTAAAATAAGCTGAATTTTCTGTTACTTTTTTGTAGATGAC ACTTGGGAAAGCCGATGGGTCTACTCTACTGACAAAGGAGCTGATTCTGG AAAATTTAAACTAACAGCTGGAAAGTTTTATGGTGATGAGAAAAGAGACC AAGGTATTCAAACCTCTCAAGATGCCAAATTCTACCAACTCTCAACAAAA ATGGAAAAAGGTTTCTCCAACGAAGGAAAACCATTAGTTCTCCAATATCA AGTCAAACATGAACAAAATATTGACTGTGGTGGTGGATACATCAAACTTT TCCCATCTGACATCACACCAGAGAAAATGAATGGTGATACCCCTTACCAT GTCATGTTTGGCCCAGATATTTGTGGACCTGGTACCAAACGTGTTCATGC AATTTTCAGCTACAAAGGAAAGAACCTCCTCACCAAGAAGGACATCAGGT AACTAATCTTTTGATCTGTAGTAATAATATTCTTAAAGAATGATTACTTC ATTACAATGATGTTTCAATGATCACAATATTTCCCCTTAAACTTGCAGTA TTTAATGCATACAATATGATTGCTTTGTTTTTCAATTATTGTTTGATTAC ACTTTTAGATGCAAAGATGATGAAATGACCCATTTGTACACTTTGATTAT CAACCCTGATAATACTTACGAAGTCCGCATTGATGGATCCAAAGTTGAAT CTGGAGATTTAGAAGCTGATTGGGACTTCCTTGCCCCCAAGAAAATTAAG GACCCAGAAGCCAAGAAACCAGATGATTGGGTTGATAATGCTAAAATGGA CGACCCAGAAGATAAAAAGCCAGAAGATTGGGAGAAACCAGAATTGATCC CTGACCCAGATGCCAAAAAACCTGACGATTGGGATGATGAAGAAGATGGT GAATGGGAACCACCAATGATCAATAACCCTGAATACAAAGTAAGTCTGAA TTTTTTAATGTCCTGAAAATTTTTTAAGGTTTAGTGAAATAAAGAAATCC TTCATCCACTATAATAGCTTTTGATATATTTTTTAGAAGCTTTAAAGGAT AGGAGATCTATTTTTTGAATGATTAACAAAACAAAATTGAATCTATTTTG AACCTCTTGTAGGGAGAATGGAAACCAAAACAAATTGATAACCCAGCTTA CAAAGGAGAATGGGTTCATCCTGAGATTGATAACCCAGAATACTCAGCTG ATGATGCTCTTTACAAATATGATGATATTGGTGCTGTTGGATTTGAAATC TGGCAGGTCAGTGTTAATTACATTACAATCAAATTTAATTATCAGTAATT ATTTACTAGATTAAAAGATTAGTCTAATTATATCTCCACTCACTCAGATT TCCGTTGGATAATCAATTTACTTCAGAAAACCACAAAACCTTTTCTAAGA CTTTTATGTAGAATTATGACAATTTGTTTTTTTTATTTCTAAAAATTTTA GACTAACAAAACAAATACCAAACTTTCACTTTTAGGTCAAATCTGGAACT ATCTTTGATAATATCCTTGTGACTGACGATGTTGCTGAAGCCGAAGCTTT CGCTAAAGAAACTTTTGAAGTTCAAAAAGAGGAAGAGAAGAAAATGAAAG ATAAACAAGACGAAGAAGCTCGCAAGAAGCAAGAAGAGGAAGATGCCAAA CGAAAGAAGGAAGAAGAAGAAAAGAAGAAAGATGAACCAGAAGAAGTAAG ATTCTTTTTAAGTCCTTTTTTACATTGTGAGTGTGCTAAGCTTATTTACT TAACAGACTTGAATACCAGGCTGCTACACTTTTTTATAAAGAACTCCAAT TTTCAGGTCATGGATGGGGTTGCTGGGCATTCTAGCTCATTTTCTGAAAA TGTGCTTGACCACCCCTGATATTATTATACCATATAAATACTTATTGGGT CAAGGGCTATCGTTTGTCATGCTTAGATTATCTTAAAAGCTTTTACATGA CGAGATAGTGATACTAAAGAGAAATTTGGCTAATTTCAGGGCTTATTGCT AATGAAAAAAATGTGTACCTACACAAACTCTAATTTTTTCAGTATTAAGC CACAGTGAGGAGTTAATTGAGATGTCCCATTGATCTTGTTTTCCATTTAT TTAAACGTCCGTTTGCCTAAAATTTCGCTATATTTTAAAGACCTTTGATC TTTTTTTGTTTTTACAGGAGGAAGAAGAAGAAGAGGAAGAAGAGAAAGAA GCCAAAGAAGAAGAACCAGCCTCCAATGACGTCACCGAGGATGAAGTTGA AGAAGAAGCTCCAAAGAAAGATGAACTATAACCTCATCTCACACTCACTC TTTTCGCTCTTATAGATGCATAGTATTTTCCAATTTCTGTTAAAAGACAA TTTATTAAAAGACACTTGTACAAATTTTTAAGTTTTTTTGAAAAAATGGA TTTCTTATTACAGTTTTCATATATATGTTTCAACGTTCGATACGTTAGTT AATTGAATGATGACGTTTAACTGAAACGTGGAGTGTTTTTGAATTGTTTT TTGTTTATGGCTTCCACTTTACTTTTCTTAGTCAAATTAGTTTATTTATC CCTTTTAAAAAGCTTTTGTAAATGATTTTTTCTAGCACTGATTAACAAAT AGGGATGTTTAAATTGAAATCAGTTTTGTATTGTTTGTCTGCCAAACATG GCCTCTGAATGTCTCTTATAGCTCTGAGGTTCATTGCAAATATTTCGGGT CAAGTTGAACATTTACAAGAATTTTTGTCATTGGATTGGTCGTTAACTAT TCAAACAAAAACTTTGATTATATTTTTCTAAAGAACGCGTCATCTCTATT GTTTTGAATAACCAATTATGTGAGCATCTTCTAATACAACTTCAATACAA CTGNGTTTTGTATTGTTTGTCTGCCAAACATGGCCTCTGAATGTCTCTTA TAGCTCTGAGGTTCATTGCAAATATTTCGAATTAACTCGAACGTGGTGAG GGCTATTTAAAATGTCTTTAACGAAACAAGATAGGGGCTACAAATCCCAA AATCACCTGTAAAACCACGCGATTCCTCGTTAATTATTTAACCTAAGAAA ATCTCGTTTTCTTTTCCTAAGTGTTTTACTGGGTTTTTCAATGCTGTTTT TCTTTCAAAAGTCCAGTCTTTGAATCTTACTTTTCTCTTAGCAAATCAAT CAAATTTTTCGGATTATTCGAACGGCTGAATTTTAAGCAAAATGTTGGTA TAATCAGGGATATGTTATAGCGAAGCTGGATAACGCACATTTAAAAAAGC CTTGTTCTATCTCTGTCCCTGACATTAAAACTTGATATGAAATTTAACTT TTTTAATTACAAACTCGTGAAATTTGGCTTTCCTCTTAGCCAATGATTCT GCTGCTGCATTTATCGTTCACGATTAAAAACTTTTAATTATCAAGAGGGT CTGTAAAACATTGATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041077TCONS_00041077Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041077-proteinTCONS_00041077-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002693supercontigsc0002693:3235..8000 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CALRcalreticulin precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
785.23 805 360.19 290.39 70.4 57.65 316.01 323.13 258.62 306.34 306.24 276.28 525.31 482.22 531.3 526.67 456.54 497.54 206.58 318.12 273.77 282.2 504.98 477.8 367.72 383.93 337.06 283.61 449.12 350.52