TCONS_00041077-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041077-protein
Unique NameTCONS_00041077-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length426

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041077-protein ID=TCONS_00041077-protein|Name=TCONS_00041077-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MDSRILFLLGLLAAVNCTVHFKETFDDDTWESRWVYSTDKGADSGKFKLT
AGKFYGDEKRDQGIQTSQDAKFYQLSTKMEKGFSNEGKPLVLQYQVKHEQ
NIDCGGGYIKLFPSDITPEKMNGDTPYHVMFGPDICGPGTKRVHAIFSYK
GKNLLTKKDIRCKDDEMTHLYTLIINPDNTYEVRIDGSKVESGDLEADWD
FLAPKKIKDPEAKKPDDWVDNAKMDDPEDKKPEDWEKPELIPDPDAKKPD
DWDDEEDGEWEPPMINNPEYKGEWKPKQIDNPAYKGEWVHPEIDNPEYSA
DDALYKYDDIGAVGFEIWQVKSGTIFDNILVTDDVAEAEAFAKETFEVQK
EEEKKMKDKQDEEARKKQEEEDAKRKKEEEEKKKDEPEEEEEEEEEEEKE
AKEEEPASNDVTEDEVEEEAPKKDEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025094XLOC_025094Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041077TCONS_00041077Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001580Calret/calnex
IPR009169Calreticulin
IPR018124Calret/calnex_CS
IPR009033Calreticulin/calnexin_P_dom
IPR013320ConA-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005509calcium ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 343..404
NoneNo IPR availableGENE3D2.60.120.200coord: 12..346
e-value: 2.7E-141
score: 470.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..278
IPR001580Calreticulin/calnexinPRINTSPR00626CALRETICULINcoord: 312..332
score: 57.03
coord: 125..141
score: 68.4
coord: 214..227
score: 54.65
coord: 241..263
score: 77.05
coord: 279..298
score: 70.12
coord: 99..117
score: 52.02
IPR001580Calreticulin/calnexinPFAMPF00262Calreticulincoord: 258..331
e-value: 2.5E-25
score: 89.0
coord: 21..256
e-value: 1.7E-60
score: 204.7
IPR009169CalreticulinPIRSFPIRSF002356Calreticulincoord: 2..407
e-value: 1.5E-192
score: 637.6
IPR018124Calreticulin/calnexin, conserved sitePROSITEPS00804CALRETICULIN_2coord: 129..137
IPR018124Calreticulin/calnexin, conserved sitePROSITEPS00805CALRETICULIN_REPEATcoord: 241..253
IPR018124Calreticulin/calnexin, conserved sitePROSITEPS00803CALRETICULIN_1coord: 97..112
IPR009033Calreticulin/calnexin, P domainSUPERFAMILY63887P-domain of calnexin/calreticulincoord: 200..314
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 17..219

Blast
[Close]
BLAST of TCONS_00041077-protein vs. Swiss-Prot (Human)
Match: CALR (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1)

HSP 1 Score: 498.819 bits (1283), Expect = 2.662e-176
Identity = 237/345 (68.70%), Postives = 284/345 (82.32%), Query Frame = 0 
Query:   18 TVHFKETF-DDDTWESRWVYSTDKGADSGKFKLTAGKFYGDEKRDQGIQTSQDAKFYQLSTKMEKGFSNEGKPLVLQYQVKHEQNIDCGGGYIKLFPSDITPEKMNGDTPYHVMFGPDICGPGTKRVHAIFSYKGKNLLTKKDIRCKDDEMTHLYTLIINPDNTYEVRIDGSKVESGDLEADWDFLAPKKIKDPEAKKPDDWVDNAKMDDPEDKKPEDWEKPELIPDPDAKKPDDWDDEEDGEWEPPMINNPEYKGEWKPKQIDNPAYKGEWVHPEIDNPEYSADDALYKYDDIGAVGFEIWQVKSGTIFDNILVTDDVAEAEAFAKETFEVQKEEEKKMKDKQD 361
             V+FKE F D D W SRW+ S  K +D GKF L++GKFYGDE++D+G+QTSQDA+FY LS   E  FSN+G+ LV+Q+ VKHEQNIDCGGGY+KLFP+ +    M+GD+ Y++MFGPDICGPGTK+VH IF+YKGKN+L  KDIRCKDDE THLYTLI+ PDNTYEV+ID S+VESG LE DWDFL PKKIKDP+A KP+DW + AK+DDP D KPEDW+KPE IPDPDAKKP+DWD+E DGEWEPP+I NPEYKGEWKP+QIDNP YKG W+HPEIDNPEYS D ++Y YD+ G +G ++WQVKSGTIFDN L+T+D A AE F  ET+ V K  EK+MKDKQD
Sbjct:   20 AVYFKEQFLDGDGWTSRWIESKHK-SDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEP-FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 362
The following BLAST results are available for this feature:
BLAST of TCONS_00041077-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALR2.662e-17668.70Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1[more]
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