XLOC_025049 (gene) - C. hemisphaerica

Overview
NameXLOC_025049
Unique NameXLOC_025049
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002668:5050..11191-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025049 ID=XLOC_025049|Name=XLOC_025049|organism=Clytia hemisphaerica|type=gene|length=6142bp|location=Sequence derived from alignment at sc0002668:5050..11191- (Clytia hemisphaerica)
GAAGAGTCACAGACACAATTCAATTTTCCATCACCAAAAATACGTGTAAG AAAATTTTTTTAATTTTAAACAAATAGATTGGTAATAGACAGAGCTCCAG GCTTTTAAGTTTTCCTCTTGGTCAGTAAGACTTATGCTTCGCAAATAATG ACCCCGGGAGATTTGTAAACAATCTTCTTGATTTTCTCACTTTTTAAATT GCTTTTCTCATTTTTAATCATTTTTATTGAAAAAAAATGGCTCGGCTCTT CGATTTCCCTAGCCTGGATATCCAGCCCGTAAACTTTTTTTGATTTTGAT ATTTCTTATGTTTACGGTCTGGTTTACCTAGATCGTCTGCATTCTCATCT GAGGATGATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACCAAACCT TGTTTGAGTATGCACATATTTTTGGAAATGTAGCTTTAAAGAAAAAAAAT TAAAACCACAGTAGCTGATCTGTACTGCAAATAGTGATCACGGAGCTGAT TGATTTCTGGAGTTTGCTCACATATCTCATTACTATAAAGTCCCAACTTT TTTTAATATAGCAGAATTAATAGAAAAAAATTTAAAAAGTTTATCAAAAT ACTTTTTCTAAATCGTAACACAAATAATTCCTTTAAATATAATCTACCTT AAGAGAAGTAATTTTGGTGAGAATTTACTTTGGTGAGTGGGCAATTTCTT ATTATAATTTTGTTGAGAATTTATTCCAGTCTGTATTTTGTTGACTTTAA ATGTTCGAGATTGTGCTCATTCTTCTTTAAAAAATTGGTATATGGCTGCT GTGGGGTGAAATCAGAAGTACAATGGTGTACAAGCTATCTATCGGTACTA CGTTAGCTCATCCCTGATTTCATCATTTTTTCACTTTGAAAGCGACGCAA AATGATATCATTTCAAGTTCAGGGTACATACATGAATGATAAACTCAAAG ATTCTTAAAGCTTTAGTGTGTAAAGTACCAGATTATGTCCTAAACTAGAC CCATTTTCAGAATGTATTCCAATAAAGTACCTTAAGGAAAGAAATTTTGG CAATTGGGCTCATTCGCTAATTTCAATGCAATTTTGCAGAATTTATTTTG CGGAATAAAGAAAGAATTTAGCAAGAATTAAGTTGAAAAATTTTGCCAAA TTTTCTATGGTTTTTCTAAATTTTTGCTAGCCTGATTAATCAAGCTCGAA TTCACAAGGCTAAGATACAGCTTATGGCAATATAGAGCATTGGTGCTTTA AAGATTTTTATGTTTGCGGATTTTGAAGTTTGCCTCGGAATTCTGGTTTA AAAAAAGCACTGCACCCTTTAGAATTTTGTATTAATTTTAATTTTTTATA TTTACAGCCTCTAACATTGATGGGAAGCTTTTTACTGTAATGTGCCAAAG CACTAGTAAACATCACTACTTCTCTATGTTGGAGCTGTTTCTAGTGGAAA TGTTGAAATTAGAAAGCGACTTTACTGCAATTTCACCAATAATTCCATCA AAAACACCCGTCACACCAAGTTCGCACGCTTTAGTTACTGGCCGTCACAG ATTACAGTAAGTTTACCATTTTAATGTAAATGATGATTATTTTTACTGAC GATGTTCTTAAAAAAAGGTATAGCTCTCAAAAGATACTTAATCTTGGTAA ATTAAAGGAGAATAGAAATATGGGTCTTATCATTTTGACAAAAGAGCTCT AAATTAATTTGTGTGTAATTTGATAATGCAAATTTTAAGGCCAAATTCCC ATTGACTTATTCTAATTGTTGTATTAATTTATTCCCTTAAAACCCTATTC GCACCTAGCTTTTAGGGGCGGTTCAAAACTAGGCTGTTTTAGAGACCTGT AGTTTATATAACAATGATATTTTGTTTTTCATTTTTACAATTGTGATTTT AAATATTTTAGGTTAAAAATGATCCGAACAGAATCTTCTAAAATGTGGCC CGATAATCACAACCTACCACGCTTTGACACTGATGCGAACAAAGATGCTT TAGCTAAGCTGGTGTCAAGTCTTAAGTCAAAAAGCTTGTTTGGACATTTG GATAAGAAAGCCATCAAAGCCAAAGTTCTGTCACACATGACCGATAGGCG GAAAACATCAAGAAAAATTGATTTCGTATGTATTGATTTTGATTTTCAAA TTATTGTTTTCTATATTTTGCCATCTTCCTATTTTTAATTTAGGTTATAT TGGAGCTGGCTATTTTTTCTGCTTCTGACTTATTTTCTTTGTATGTTGTT TTGTTATTACCGAATTTTTGCAATATGACCTATCTTAAGTCTGGCTGAGT ATGTGGATATCATTATTTATAAAACATTGAGTTACATTTTTAGACCACCA AAAAATCCAATTCAATGAAATCACCTAAGGAAATAGTCACCACACCACAA AAACCAAACAACAACAAGGATTTCGAGGATGAAGAAGAGTTGTAATTTAA TTCTATCCCTCCAAAAAGATGTGTAAGAATAAATTTAAATTTAGGCAAGG ATTGAGAAGTTTTAAAAGGGTGGTTTTAAGCATACAGCTGTTCTAGTTAT ATATTATTATTATATAATTATAATATTATATAAAATGCCTTTCTGCTTTA AGGCTAATTTTAATTTTGAGAAAATTTCTTTAAATTATCTAAAAAGAAAA AGGGTGTATTATACAATTGTTTCTTATTCCATGAAATGCCAAGTATGTGG ATTAATAAGATATTTGTAAATAACTGAATTATATTTTTAGGCTGAATCTT CAAAAGAATCACCGGAGAAAATATCCACATATTCCACGTCCACTTCCACT TCCACAAATAAAAAGTTAAACATGAACATGAGTGAGGAAGAAGAGTCACA GACACAATTCAATTTTCCATCACCAAAAATACGTGTAAGAATAAATTTTT AATTTTAAACAAATAGATTGGTAATCGACAGAGCTCCAGGCTTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNAAGCAAATAACAATAGAATATCTAATTATCTCCCTTGGGTGTTTGACC ACGTATCCAAATAAAAATAACAATAATGGTAGGGAAGAAGTGTGAAGATC AAAACATGGGAATTTTTGATGTTCTTGTTGTTTTCTTTTCAATTACTTTG CTTAGATATTCTTGTTTTAATCTTCTTAATGACTTGGTTGCATCGTGTAA AGAACTAAAGGTATATCTTTCTTTTGCTTCAATTCTTCTTTTCTGTTTGN NTTCCCTAGTAAACTAGCATCTGTTTACCTTTCAGAAAGTTAACAAGGAT GACCAACAGCGTGAAAGCAGCAACAGTAAGTTGGATTTCCTTTTTGACAA GCAATGAAACGTTAATAAAAATCAGTCATTTTAATTATTTTAGCTCGTGA CCACTCAGGAAAAAAATGCCCAAATATCTCATGGAGAAAGAAATGCCTTG AAAGGAACATGTGAGAACCAGATTGTTTAGACAATGTTCTCTTCTATTTT ATTTAGTATCTCAAACTCGAACGAGCGCCAAATTTATCAACCAAGTCAAT GTAGAAGGTAAGGCGGATATTTCATAACTTGCCAAAATCCTGATAAAATT TTTACCAGAAACGTTCAAAAACGTTCTTTTCACAGAATTTGATATTCTTT TAATGATATGTGAATCTTGAAAGTTTTCTAATTTTTTTGAAAGTTCCTTC TTTTCCCCCCTCTCCCTGCTTATTCCAAACTCCCCGGCTATTAGGCACCC GAGAGTAATAATATAATCTTTCGTTTCAGATCTGACCAACAAGGATTTCG AGAATATTGCAAGAATATTCAGCAACAAAAAGACCTTGTGCAAATCTGCA ATTCTTGCAGATGTTACAAACTTTAAACAGTTGCGTTTGGACGTAAGGAA CATGAGAGACATCCACCTGATGGCTGAGAGTGTGGGGCGTCAGCTGGTCG AACACCGCATGGTGATCATTGGGTCTTGTCCAGTTACGGAGAAAGATGAT GTCATTCTTATTGCAAAGTAATTCTTTTTACAGCTTATTTTTAGGGTAAC AATCTTTTTTTCGGAATAAAAGTCTTTCATTTAAGTTGTGTTTTTATTCA GAATTAAAGGTCCCATTACACATAAAATATTGACAAGAATTAGAGAATTT CTCGTTGTACCTGTAATTCTTTACCTCATTCTTCAGCAAAATACACCCTA GAATGGGAAAAGAATTAGTTTTCATTTTTTGTCTGATTTTTCTTATGTCG CTTTCAACATCGTGTGTCTTTTTATGATGTTTGTTTACATTTTTGATTTT CATAGATTATGATATATTGTTTAAAAATTAAGGAATAAGGGCCTGGTTTT TCAACAAAGTCCAGAAAATACTGCAAACACGAAAAAAATTAAGATTTTAG TCTAGGCTAGGTGTTTTTATGGTTTTTTGAAAACACTGCAACACATGTGT ACTGTACTTAATGGGAAATGTTTCTGGTACTTTCAGTGTAAATTTAAAAT NGAAGAGTCACAGACACAATTCAATTTTCCATCACCAAAAATACGTGTAA GAATAAATTTTTAATTTTAAACAAATAGATTGGTAATCGACAGAGCTCCA GGCTTTTAAGTTTTCCTCTTGGTCTGTAAGACTTATGCTTTGCCATTAAT GACCCAGGGAGATTTGTAAACAATCTTCTATATTTGTTCTCTCAATTTTT CTTGCTTTTCTCACTTTTTAAATTGCTTTTCTCATTTTTTATCATTTTTA TTGAAAAAAATGGCTTGGCTCTTCGATTTCCCTAGTAAACTAGCATCTGT TTACTTTTCAGAAAGTTAGCAAGGATGACCAACAGCGTGAAAGCAGCAAC AGTAAGTTGGATTTCCTTTTGGACAAGTAATGAAACATTGATAAAAATCA GTCATTTTAATTCTTTAAGCTCGTGACCACTCAGGAAAATAATGCCCAAA TATCTCAGGGAGAAAGAAATGCCTCAAAAGGAACGTGTGAGAACCAGATT GTTTAGACAATGTTCTCTTCTATTTTATTTAGTATCTCAAAGTCAAACGA GCTCCAAATTTATCAACCAAGTCAATGTAGAAGGTAAGGCGGATATTTCA TAACTTGCCAAAATCCTGATAAAATTTTTACCAGAAACGTTTAAAAAAGT CTACTTTTCACAGAATTTGATATTTTTTTAATGATATGTGAATCTTGAAA GTTTTCTAATTTTTTTTGAAAGTTCCTTCTTTTGCCCCCCTCTCCCTGCT TATTCCAAACTCCCCGGCTATTAGGCACCCAAGAGTAATAATATAATCTT TCGTTTCAGATCTGACCAACAAGGATTTCGAAAATATTGCAAGAATATTC AGCAACAAAAAGACCTTGAGCAAATCTGCAATTCTTGCAGATGTTACAAA CTTTAAACAGTTGCGTTTGGACGTAAGGAACATGAGAGACATCCACCTGA TGGCTGAGAGTGTGGGGCGTCAGCTGGTCGAACACCGCATGGTGATCATT GGGTCTTGTCCAGTTACGGAGAAAGATGATGTCATTCTTATTGCAAAGTA ATTCTTTTTACAGCTTATTTTTAGGGTAACAATCTTTTTTTCGGAATAAA AGTCTTTCATTTAAGTTGTGTTTTTATTCAGAATTAAAGGTCCCATTACA CATAAAATATTGACAAGAATTAGAGAATTTCTCGTTGTACCTGTAATTCT TTACCTCATTCTTCAGCAAAATACACCCTAGAATGGGAAAAGAATTAGTT TTCATTTTTTGTCTGATTTTTCTTATGTCGCTTTCAACATCGTGTGTCTT TTTATGATGTTTGTTTACATTTTTGATTTTCATAGATTATGATATATTGT TTAAAAATTAAGGAATAAGGGCCTGGTTTTTCAACAAAGTCCAGAAAATA CTGCAAACACGAAAAAAATTAAGTTTTTAGTCTAGGCTAGGTGTTTTTAT GGTTTTTTGAAAACACTGCAACACATGTGTACTGTACTTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041024TCONS_00041024Clytia hemisphaericatranscript
TCONS_00041023TCONS_00041023Clytia hemisphaericatranscript
TCONS_00041022TCONS_00041022Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041023-proteinTCONS_00041023-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002668supercontigsc0002668:5050..11191 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.45 1.66 0.66 0.34 42.79 29.57 3.63 3.63 2.14 2.38 1.25 1.78 0.75 0.8 1.78 1.98 1.97 1.64 0.65 1.07 0.66 0.82 0.84 1.48 0.12 0.19 0.56 0.51 4.63 2.84