XLOC_024927 (gene) - C. hemisphaerica

Overview
NameXLOC_024927
Unique NameXLOC_024927
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002604:10000..19734+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024927 ID=XLOC_024927|Name=XLOC_024927|organism=Clytia hemisphaerica|type=gene|length=9735bp|location=Sequence derived from alignment at sc0002604:10000..19734+ (Clytia hemisphaerica)
GTATCTTACAATATTTTCCAAgtctttcaaaaaacaaaagtcAAAATGTT TGCAGCAATGAAATCTGGCTCCATGGCATCTTACACGCCACCTGCACCTC AACCAGTTGCACAACCAACACAATCAACCTACACAAGTTCTTCAAGTGAC AATAACAGAGATGACTCAAGAAAAGCACAACTCAAAGTCTTGGGTATTCC TGAAGGAACTGATGTGGTAAGACTTCTTGAGTATATATATaaggtgaaga tcagagatctgacctcaaggagagcaagtgttaaaaatgctaaataaaat aaagatgaaacataaaaagggactaatATTGTAAATGTCAAATCCCAATT TTATGTTTACACCctgcttcaaaaaaaaatactgtagtattttcactttt taggAAACATTGAAAGACTTTTTCAGTGATGTTGCCAAAGCAGTAGGAGC AAAGATTTTACCGTTGCAAGAGGGGAGGACAACTGCACTGGGGTAAGACA TATTTTTGGTTTCTGTTTACAATAACAAAACTCCAAATAGTAAGCCAAtt attcaataggtaaaaggTGTTGTAATGTTCAAAGACTCAAAGCTGAGTTC GATATATACCACCAAGGGTTAATAAATCTAATATCCAATGAAAACAATTG ATTATATGTCTAAGGACACCAATACAAGTACTTCGATAAAATCTTAAGTA AAACTTGTTGGCAAAAAATGTATGAATCTTTGCtctaatcaaaatttttt actaaaaataaattttgattaagAATGTTTATCCATTGAATAGAAGGGGT GGGAAATCACATTTTATatcaggctggacttaaaaaattgttggtttgcc gtcacccaaccgaccctacctcgaaacctgccggcccaaaaaattttatt gccattttaaagaaNGCCGTCACCCGACCAAgcctacctcgaaacctgca gacccaaaaaattttattgccattttaaagaagatttttttttcttcaaa aacttcaaacaataaaaaatcaaaactcgtatcttgtttgtctcaagcat aagaatcgtaaattccctgctagcacttttgttttttattcaaaattacc taaatgtaaacaaactgttaacccctccatggacgaaaatttcataaatc gccaaaataaaaaaaaattctgaccgaccgacccacctccaaaatctagg gtcgggtgacggcaaaccaacaattttttaagcccagcctcAGTGTATCC TGTCTTTATGGCTTGGTATTaccatttgaatttttttctcttagaTTTGT TGACTTTGAAAAAGAACAAGATGTACAAAATTGTGTCAATAgtaaaaaca atgcaatgtttAACGGTAGTTCACTACGTCTTTTCCCTGCAAGTGGTGGC AACAATAGCAGGCCTGGTGGTAATTCAAggtaatttttttacttggtttG AAGAAGCTTGACTTGTCATATGCACATCAACTTTATCTAGGTGATGTTGA GgatgattttgaaaatcagTTGTCTAATAGAAAAAACTCTGAGTCAGGAA AAAGACTCCCTGTTTGATAAGTAATTTCTAGATTTGGTTTTCCTATTAGC GGTGGTGACCGTCCTCAAGTCAAAGTTCTTGGAATTCCTGATGGATCTGA CGAGGTTTGTTTCTGTCATATTGTTGTGTATATTGCACCTGTTTGCACCC ACTAAACAGTCCTGACAATTCagtcgttgttttttttgtcacaGCAAAAT GCTGCTCATCAATCTTGGCAAAGCAGAACAGCATTTTGATGCAAtaattt ttgttaattgaatttttttactattCGAAAGCTTTTTAATAACTTTGTCA ATGTCATGTGAATCTAGAGATATTTTAGATATATTAGACATTATATTaat atttgtcaaaaattttaccTTGGCAGACAAAGAATAACATTATTTTCTGT GGTGTTTGCTACATGTCATATGCCACAGCCAATTGCCAGAACTGCATAAC TTATCTttgaaaaaagtacaaaatagcaatgcctagaTTGTTTTCACTAG TCCTTTTattaaagaaaacattcttaaaaattttaaaatgaaatataaTT CGTAAGAGCAGGGTGGTCATtgaagaaaaacataattttacataaaaatg AGTTTTACAAAACTCTGCTGAACTCTGTATGGGGTTGGtatgtaaaatct ctttttttttcacagtATCATGTCGTTTACCATTCAAGGCTTTGATACAT TTCTGTTTTTAGTTATATTAAACATATTATTGTGTTTTAGGGACAACTTC AATCATTGTTTTCAGAAGCAGGAAATGTAACCAGAATGAATATTTTACCT TGCAGAGAGGGAAGAAATACAACTTTGGGGTAAGAATGAATATGAGGTTT TTGATAATGAGTTCTAGCACTTCTCTCccagatttccaaaaaaattctta ttaagGGAANAGGTTTTTGGTAATGAGTTCTAGCACTTCTCTcccaaatt tccaaaaaaattcttatcaAGGGAACCTTTTTGAATTGTTTGGGGCACTT GATAAACCAtaaattgaataatttttcttcCTTAAATTGAATGTAACAAA AACTCTTACAATTTTGGAAATCACTTCCGGAATGTACCATCGATCAATAT GATAATCAGAAATAAAATGAGTATGGTTTGAATACAACATTGACATTCAG TGACATGTTCAGTTTGAAGCATGCTGTTTGTCTATCATTTTAAAGTCATT GACCTTATTTAAAGGAACATTAAAAtagtaaaatgtaaatattgcgcgaa ccacgtttcattaaagagaacaattaaaNgacattaaagtagtaaaatgt aaacattgcgcgaaccacgtgtcattattaaagagaacaattaaaatcac atgtccaaaacaaacttataaAACAATTGAGCAATCAAAactagccatat ttggtttgattttttattttgacatgttacatttgttttgattttgtatc cgctgcatacagtttgtttacacatttcgcaagtactgttatgtcccttt aatagttctactgaaaaataaaataaaatcaattgaTTTTCTATCAGGTT TGTTCACTACAATTCACAAGCAGAAGTTGATAAAGCTGTTTCACTCTACA ATGATTACGAATTCAATGGATCTAAGCTGAGAGTTATGTCGGCAAACACC CCATCAAACGGGATCGGTGGCTCAAGTGCACCTTTATCAAATAATTTTAT GAATGGCTCATCCAGTCAAAGGTCTTTGTATGATACTTTTGAATGCAATG GCAacttattatttgtttttgcagggtgggtcggtagtaaaatctcagac atatatgagtagtaaaaggatttttacgaatttttacctaccaccaccca gactcttggaagaggtattttactaccctggtagtaaaagttttttggac aatttgtcatggagaccacctattttttggttgcttttgcaaaaaaagct gAACAATTATTacttctgtgacacattttcacgtagtgcaaaaattaatg ttttgcccttagaattaaagtcttttttatattgacaattttttgagaat tttttgtttgcagcaaacgactttccaacagaaatttttttcaaattagg tAGTAAatcttttcaacatttaacatatagataccacccattttagtatt taactaccctgtagtaaattttttttcttcgatttttcgtcacaccacca ccgtagtaaacgtcattatgtctgagattttactaccgacccccccccct ggttttTTATGCACTTATCAGCATTTCCTGTGTTCCTGGGATTTCCATAA ATCTCAACTCTCAAATTTCTCAATAAAATCCAAGCCAAAATGCATTACCT GAAACACCGGAAAGTTTCTGAACCATTCAGTGTTTTCTCTGGTATTCAAG GTGTTTTTCAAGACGATTTTGAAGCAGTGTCCTGTCGGaaccaatcagat aaaaatcagttgaaaatcgggaaaattaaCCAGTCGGGACTTTTTCTTAA CAGTCGCCTTCAACAGGACATTCagtgtttttaaaaactttgaaaactga aCCATTCGTGACCAAAAGTGTTTTCTGCAAACCAGGTAAGCAATGTGTTT TTAAagacatgaaaggttcaggctcATGGTGAAAAAAAACTGTCAAGGAT CCTTTTTTGGGTCAAAAaggcttttttcaattttttgactgtttttgaCC AAGATTGTTGTTTACGCTAGCTCGTCAAGCGCATGCATACACCACCTCAA CCACAAAGCTTCATCTTTAAGGCAAACAATTACCTAAAGAAAAGCTATTA CATTGCTGTtcgatttctaagatctttccacttgctaccattttgaattt aaatgcCTCACTGAAGAAAAGATGAAGCTTGGTGGTTGAGGTTGTGTATG AACCCAAACCATTTGCAGTTTAGTGAAACGGTTCGAGTTTGTTGGTTTTT AACATCAAAAGATATGTAACCTAGGCCAACGACTTAATAAAATAGATGGA CCAAGAACTTCATACAGTGGCTCTtagaaatcttttgttttctattcatt ttgtattctttcatctTGCCGTCTTTCCCCCGTCCGCGTAAGtcatatta caaagaaattagaatttttacaagcatctctaaatggtgtaaaatcaatt atatcaaatttctactgaccataaacataattttcgattttttttgctaa cATCAGATCGCATCTTTAATGATCTTTctcacaagatatttttcaatatt tttcgacaACACTGTTGCCTTTTTCAGcgcattttctttaagaacataaa aaattttgaaagactcTAACTAAGAAAATAAACGTGCGTTCATTGTGCGT TCTTAAGATAGAAAACACAAACACTATCCAAatacaaatgttataatttt aacaatgtttactagtttttaagcctaaaagtttgacttgaaattaagaa catattcacaaaatttaggtcatgtgatcaatatcaaccaatagctaatc ttaaaaaaatgcttttgcacgcggaatgacattttaatgatgcaaaaaat cattaaattttttatcattcttacgCGGATCCTTTCAATAGGATACTGGT CTATCTATTTTTTTAGGTCGTTGCCTAGGCCTAGCTCAAAGTCCTTTATA AATTCTAGAAATTTTGACAATGTTCCTCAAAATTGGGCAGAAAATGAGTC CTCTAAGACAATGAAATCTtggtttttggaaattttctggGGATAGCGCA AACCTTCATCAAAATCTTTATCTCCTGATCTACCCTTTAAAGATCAAGTC TGTCGAAATATGCTTTCAAGCTCTCGAATCTTCAAAGATGAACTTTACCA ACCTTTAAAAACAATTTAGCTAATCAGACTGTTTGCCCTTAAAGTTTGCA GTTAAATGAGCCCTAAAgctcaaatttttcaaagagaaGGCAAGGTTTAG AAATATTCTATACTTTTGGACTCATCTTTGAGTATTTAAAGGGTAGACGG GTTGACAGCAAAATTGTCTTGAGAAGTTAGTAAAGTTCATcatttgtagt gtttttgtgacgtcataactcaagctaccattttgaaaattttgattttt tttgaaaattatttacttTACTAGCCACAGTTTCAGAATCACCAAAAACC GATTCCTCATTTCgatttgagaaagcatggttctatatcaaaTCTTTTTA AGTGCAGTTcccaaaattgtcaaaaacttcaaattgacATAAATCCTTCA TTATGGGTTTTCAGACataaatattttgggattttactcagttcattgcA TTGTACttaaaaacatatcaaaaatgaaaaaagtttcaaactattggacc tgcCCAAAACTGCCTCATTCTtgaaaaactggctcttaactATTAAGAAG TTTCTTTATCGTCAATTTTTATATTGTCTCATCTTTTTCTAACAGGAGCA GTAGCAGTGGGATGAAACCTCAAGCAAAAGTGTATAATATTCCTGATGGC ACAACAGAGGTAActtttttcttcctctttttaTTCATCACTTAGTTATT GGCATTTTTTAGTTGACAATCAAGGCTGTTGGGCTTAATTATTTGTGTAT TTTAGTAACTGAATGTTTATTCCTTGTCAAATAATGTGACTCTGACTCTT TTTGCTATACTGTTGGTGAGAGAGCCAAATGCACCTACACCCCCCTCCTC ATCACATTATAAAATATCAATTATTCTTTGTCNCAAATGCACCTACACAC CCCTCCTCATCACATTATAAAATATCAATTATTCTTTGTCttcttttgtg aaaaagagaatTCCCAAAAGTCACTATATGTAAAATAAGTGCAGGTTTAG GGTATggtaaatcaataaaaaatagtCTAAAGTAGAGCACTTGTGCGACA TTCAAAGTAGAGGACTTGTGAGACAGAAAATTTCTTGAACTTAGCTGAAT AATACTCACAACGCTGAATGAACTTTGCAAAATGagcttttaatgttttt tatttatcagGACGAAATCACTGCCTTGTTTGGAAATGTTGGAATCTGTA CAGGTTGCAAGATTTTGCCTTGTAGGGAAGGAAAAGATGTCACCCTTggg taaatatttcttttgaagTTGCAAGtacattatttttattttacttcagc agttttgaatttaaattcaAATAGATTGTTTCGACAAATTTTCAActaat ttttatatatttttttgagatTGACTTTGTAACAACAATGTGTATTATTT TAGGTGCATACCATTtagccaaaaaaaaacaaaaaagtgaaacagaggGT TTAGCGAGCGTATTGATTCATCTAAAAGTTTACCTAAACAGACGATCAAA GCCAACGGtctttttttctgtgttttcttcGTTCGCTAAACCAAGGGTTT AGCCAACAGTCAGcaccatttgattttttgttttgctaaacCATTATTCT GACCAAGCACAACACCTCCTTTACGCTGGTTCACCAAGCGCACGCATGCA TATGCCCTAAgctttaataattttttcagCTAGGTTACTATTTTGAAATT CGTTGCTGTGACTTCAGgcctttaaattcaaaatagtAGCGTGAGAAGTG TAAGATCTTAGAAATCGAATTAGCAATGCAATAGATTCTTTGTTtaggta aacaaacccaaaccattAGTGAAACAGTTTTgcttttttggttttgaaca ttaaaaggtatacaacctttatttttttccattttgcaatatattttgaa GTTATGATCATCCTCaggctgaaaacaaaagtaactagccgtattgtata agggttgcgaagcgatccagactctacctcaattcgcaagttgctagcaa aataatagcgagcacctcactactaaaaaccgggatttttcatctcgttt cttagtgagttccactttgacgatttttgaaaaatagaagcctttcaagt gttttgacgcaaattcgattatttNNtgcgggtgacgtctagtataggct agcaaaataagagacactctaaaaatccctctaataaagccgctataaga gcagagacagggtcgtaagagcgttgaaatttaagaacatacaaacattg ataaaaaagttctaAATATCTTCTTTTAGCTTTGTCCATTTTCAATCAGA GGAAGAGGTTGATAAAGCAGCTCAGATGTACCATGATTATGATTTCAAAG GTTCACGTCTCAGAGTTGAAGGTTCTGGTGGCTCTTTTCCCTCTAGGTAA TTTAtgccaaaaattttctttctttattaatAAGGACATATATCCTCAGC CTGGGTTTACCTTAAGTGTATATTTTCGCATGCACTTAATTTTgcaagtt tttcaaaaacacaaaaatcttaaaataaatacactggaaaactttcaaaa taggCCAAGATAGCGAAATTTTTGCAagtagaaaagaaaaatgaattttt tttaaaggcaTCAGTGATGGTTTGTTACAATATTGATAGTATTTTTGCAT CTGATATGTTAagattcatgaaatttttggtAACCTCTAGTGTTTCGACC CTCAACACTTGTAAAAGTTTGTTCCAATGTGCTGCTGCTTGAAGGTtaat ataaaatattttgtacATTGTGCATTGTACATTGTTCccccaaatatttg aaacatcttTAGTCCCCACCTTTTTTGGGCTTTTTGGAGGGTGTAACCCC CAACTAGCAAGAGGGCTGACACTATGAAGGAAGAAGGAAAGCACAATGTC AACAAGAAatggttattttttcttcagaCAATCTGATTCTTCACAATCTC GACCTATGGGAAGAGGAGCACAACTTCTTGCAAATGTCAACGCGATGAac ggaggtggtggaggtgatTTTCCACAAAGAAGAGAAAGAGGTCCTCAAGC GAAAGTGTTTGGAATACCAGAAGGGACCTCTCAGGTATCTTTTAAGTCTT TCTCAGTTATAagttttaaaaagatttaaatCAAGCTTTTCAATAATGTA CAAAGACATGTTCATGGCATACTTGCCGTAATAACCTTTCTTAGATGCTT AGgataaaaaacaatcgaaaCCCTTTTTTAATAGAAACCCTgactatttt tcaatttttaggatgagttgaaagattttttctctcCTGCTGGAAACGTC ACGAATACAAAGGTTTTACCTCTACGTGAAGGAAAAGATACACATCTGGG GTAAGCTCATTTCTCTCAAATCTTAGAACTTAGATGTTTTTTATAGTACT TTATCAAAAGGCAGCAAGAAAAAAGAAAGCTCACAACTAGTTTTATTTAa cgctttttttctaaaaacaggTTCATTGAGTTTTCCAACGATAGTGAAGT GCAAGCTGCTGTTGACCAGTTCGATGGACAAgatttcaaagggtctaatc tgAAAGTTATGGTTGGTCAAACTAGCGGTGGCAGCGGTGGAGGTTCAAGT TTTCAAAATAGCAGCTGGAATAGCAGTTCAATTGCACCTACGAGTAGAAT CCCTAGATTCGGCGACAGATCGTAAGTCTTGTTTTTTCCCTCCTCTCTTT CAAGATAATTCTTTCAGATGTTGACATACAAGCTTTATGAACAAGCATTG TAACATCttgtcttttcaatttttttaggaATGGTGGTGGTGGTATGGAC GGTGGTATTCAATTAGATGCAAATTTCGACATGAATGGTAAGGAAAACCT ATCAGCTACCaaagaaacaaacaaacttttccTACTTCAAAATGCACTAA TATCTAACACTTGCGTAGCACTCTGGACAATCTctatttttaccaatttt caaaTACTCGCCAGAAGCTCTTTCTTGTGGAACCAAAATAATCACTTTGT ATGGCTGGATAAGCGATTTTTGATTCTCgattttatttgataaaattcat CGGCCTAAATCATTAAAGCATAATTTTAATCTGCTCCCAAACAGGTGGCA TGATGGGAGATGACATGATGATGAACCGCCCTCCACCCGTCAACTACATC CCTCCTCCACCTCCCGAAACTGAagatgaaatctttcagcttgGGATAAA TGagggaataaattttgaaaagtatttCAACATTCCTGTTGAAATTACAG GAGCAAATGCGCCGAAACCAGTCAATAACTTTGCTGAGGCCCAACTCAAC CATGTAAGACAACTTTTCCAAGAAATATTCCCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040859TCONS_00040859Clytia hemisphaericatranscript
TCONS_00040860TCONS_00040860Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040859-proteinTCONS_00040859-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002604supercontigsc0002604:10000..19734 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.5 16.99 13.71 11.47 173.37 135.9 122.15 136.45 61.78 78.93 64.64 58.85 66.2 81.05 57.76 80.14 60.78 59.83 15.33 19.85 79.49 79.62 48.38 51.93 108.02 122.41 18.13 15.84 33.91 37.31