XLOC_024812 (gene) - C. hemisphaerica

Overview
NameXLOC_024812
Unique NameXLOC_024812
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002540:11491..14755+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024812 ID=XLOC_024812|Name=XLOC_024812|organism=Clytia hemisphaerica|type=gene|length=3265bp|location=Sequence derived from alignment at sc0002540:11491..14755+ (Clytia hemisphaerica)
ggcccccccgcttgttaatttttcgaaaattttccaacccccccggacct
tattaggaccccccgtttattaatctctaagaatattacaaaaaaacaaa
ttttaagttGCAAATCTTCAAATGATGGGTGAACCATCTAATGATACAGA
CAATGGATTCAATATTGATGATAACAATTCTTTATGGGAAGGTATACGTT
ACCTAgctttagtttttattttcataaatttatcATTGATCCTCCCCCCC
CTTTAATTTAAGggggacttgaaattttgagataaaCTTCAAGAGGTAat
aacttcaaaacttttgaaataagtCACAAGGGTGGTCAGCTTTCTTTAAT
TACTAGTACTTACTTTATTGGATATCTCAGCTGACGATCTAAtaaagact
gtttaacaattgacgtTATACCTTCTTTCTTATTGTTCAACCTCATGCCT
TGTGAGACTATTCATTAAAGTTCTTTAATTGTATTTTCAGAAATCGATAA
CCAGACAAATACAGCGTTGGGAAACATTATCATGTGCGGCGAGGCGTGTC
AATTTTTGTTTAGTGTAGACACTGTATTAAGATCTTCCTTGGAATCTGGC
ATCACTGGGCATTCAAGCCTCTTCTCAACTGAAGAAACTCTCCTTGACAT
TGCCAGCAGTGGTGAGGCAGAGGGTATCTTCTTTTGTGCGACATTCCGGC
TCTTACAAGAAAACATCTCCATCGTTCGATTCTTTGAGCATGGTTGTTAC
AAAGGTGCTATGAAAAGGTTAAATGCATAATACATTTTTTGTGTAAATTG
TTGTCCTCATTGCATACATATTCTGCTTTTTATCTTTATTCACAAGTTAA
AGAATTACATTTCGTTTATTGTGCGAGCCTTGCAGATTTCTTTGTCGAAT
CGAATCTTACTTATTATTGTTATGATCTGTAAGTGGCTACATCCTAAGAA
CTTTACCGTCTATGACCtctcattttttaatttttcagttcGATGCAAGA
GACCATTAACAGTATGATTGAAGACGAAAACTCGCATTACATTGAAGTTT
TCAATGATTATGACGTGGAGAACAAATTGAAGCGGGAATCTCtactcaaa
aagaagaaaggtaAAAAGTCAAGACCATATCCTTCTCTCccttgaaaaat
ttgattaagtAGAAAAAGTCTGCCAATACTTTTCAGCAAATAAAGTAAAC
TATTTCAATGTTTTCTGTctttttcacgatttttaggaCCCGCGAAAACA
AAACGATCCAATTTTCATCGAAAGTTATTGGAAAGTAAGGAGAGTGTTGG
CTTGAACTTGCCGTTCATCGCTAAAGAACTGAATGTTAGTGGTCAAATTA
AATGCACAGGCATCATTGCTAGAGTCGAACGAAATAATGCTAAAAATGAT
AAAGACAAGTAAGTAAAGTTTCCAGACGTTTCCTTTGACTAAAATGACAG
AGACATAACAACTTTGACGAACTTTAGATNGTTATTAAGTTATTAAGTTA
TTTTAACACAATTATGCGATTTCATTGAAAGGAATTCACTTTACCGTCCA
AATCAATCTGGATTTCGGAAAGGGCACACCACAACAACGCTACTCTTAAA
ACTACGTGATGATATAATCAAAGCTatgaataaaagtgaaattacaCTAT
CAATTCTTATCGACTACTCCAAGGCATTCGATACGATCGACCATTTTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTTAgtgctttttattttgatattt
atgtTTAGGGGGAAGAACAATTTTGTATGAAATTGAACCTaataaatgat
aataataataataataataataattaaatgTACAGGCATCATTGCTAGAG
TCGAACGAAATAATGCTAAAAATGATAAAGACAAGTAAGTAAAGTTTCCA
GACGTTTCCTTTGACTAAAATGACAGAGACATAACAACTTTGACGAACTT
TAGATGTTCACGATacgtaattttattttatttaatttaatttaatctta
TAGCAAGCCCTTAGTCTTTTTGTAGATGGTGACTTTCTTTCTTCGGCACT
GATGATGTTTTTAAATTACTTTACATAAATCTTAATATAGTTTGACGTTT
GATTATTCTTCACTATGACGACATGACGATTTTGACAGTTGACGTTTACA
ATTATTTCACGGTAAGCATAAGACTTGACTCGTACATCCAAGAGTTTCTG
GGTTATTTGACTGAAATATACGATGCTGTTCTATGAGAGATAAAGATGGA
GATGAAAAGACAGGGAAACTTTGAAGTACTTTTTGAAACTCTGTTTTAAA
ATGCATGTGCTAAACATTTGCTAAACTCGATTTTCCTCCGAAATGGTACA
TAANCTTTTTAAAACTCTGTTTTAAAATGGATGTGCTAAACATTTGCTAA
ACTCGATTTTCCTCCGGAATGGTACATAATAACAAAATAGAAACTGCCAA
AATTTGTTTTCTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040727TCONS_00040727Clytia hemisphaericatranscript
TCONS_00040728TCONS_00040728Clytia hemisphaericatranscript
TCONS_00040729TCONS_00040729Clytia hemisphaericatranscript
TCONS_00040730TCONS_00040730Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040730-proteinTCONS_00040730-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002540supercontigsc0002540:11491..14755 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.22	2.57	0.87	1.1	10.95	6.98	8.18	11.01	6.03	9.7	9.49	6.13	8.79	8.37	3.28	6.27	4.55	6.83	3.81	3.46	5.15	4.54	2.97	4.42	3.7	6.44	6.06	5.05	6.35	7.25