XLOC_024665 (gene) - C. hemisphaerica

Overview
NameXLOC_024665
Unique NameXLOC_024665
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002460:170..5128-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024665 ID=XLOC_024665|Name=XLOC_024665|organism=Clytia hemisphaerica|type=gene|length=4959bp|location=Sequence derived from alignment at sc0002460:170..5128- (Clytia hemisphaerica)
CAATAACATGCAGAAGCATTTCGAGCATATATGTGATTGGTTGGAAGGAG AGAGTGAATGCGAACCCCATTTACTGAAAGAGGTATATGACAAAATGGTT GAAATTGCCGGAGATTCTTCCCAATGCTACAGCTCGAAGCAACTCAAGAG GAAGTTGAAAGAGCGTTATGGTGATCATCTGATTTTCATGGAGGAGCCAG GGAGATCCAACATGCTGTGTTTCAAAAACTTTGCCTGGTTCATTATGGAT AGTTTCAAGAAAAACAAAGTTCCTACTCCAAGCTCGATTCTCACTGCTGC AGCAAAAATCATTAAATCAGAGTTGCGTCAGATGAAATGCGGAAAATCAC ACTACCCAAATATTGAACAGATGGATGATATCAATTATATGAAACAATGG GTTCCTGATGCACTACTTACATTATTGAAAGAGCTTATTCCTTCAGAACT GAAGCAGGTCAGCATCGGCCAATGCATATCGCAGTCTGCAAAACCTAGAT CGATGTTAGCACCAATACCATTTGGAGTTGGAGTTGATGTTGATAAGTCA TTCGAGTGCAAATGGTTCATAAATCATCTCGCTAAACTTGGCTTTTCCGT ATCTTATGATGAGGTGACCAACTTTAAGAAGTCTGCAGCGGCAGTAGCCT GCGGTTCTGNATAAATCATCTCGCTAAACTTGGCTTTTCCGTATCTTATG ATGAGGTGACCAACTTTAAGAAGTCTGCAGCGGCAGTAGCCTGCGGTTCT GGTTCTGCTGAGGTCGGTGTTGCTGTTGGTGATTCTGCTGAGGTCGGTGT TGCTGTTGGTGATACTTCTGAGGTCGGTGTTGCTGTTGGTGATTCTTCTG AGGTCGGTGTTGCTGTTGGTGATTCTTCTGAGGTCGGTGTTGCTGTTGGT GATTCTTCTGAGGTCGGTGTTGCTGTTGGTGATTCTTCTGAGGTCGGTGT TGCTGTTGGTGATTCTTCTGAGGTCGGTGTTGCTGTTGGTGATTCTTCTG AGGTCGGTTTTGCTGTTGGTGATTCTTCTGAGGTCGGTGTTGCTGTTGGT AATTCTGCTGAGGTCGGTGTTGCTGTTGGTGATTCCGCTGAGGTCGGTGT TGCTGTTGGTGATTCTTCTGAAGTCGGTGTTGCTGTTGGTGATTCCGCTG AAGTCGGTGTTGCTGTTGGTGATTCTTCTGAGGTCGGTGTTGGTGTTGGT GTTGGTGATTCTTCTGAGGTCGGTGTTGGTGTTGGTGTTGGTGATTCTGC TGAGGTCGGTGTCGCTGCTGGGGATTCTGACCAACATGGCGAGTTTGTGT CACTATTTGAGCAATGGGTAGCTGACAATGTTGATCATAACATCCGAACC TTGACTGGAAAAGGAACTTTCCATGGTATGGGTATCGTTTCAATAGCATC TCGTGAAACCAAGAAGTACAAAGCAATCAAGCGCCTGAAGAAAAATGAGA GCAAGCCTCAAACAAATGGTGTTTCAATCATACCTTTCTACGGTTCACAC GAGCGTGGTTTATCGAAATTGAAATTTACCAAAATCAAAGATCTGTCAGA GAAATTTCAAAGCGAACTCACACATCATCATCAAGAAAAGACCATCGATC TGATTTGGCAAATGGCATGGCATTTTTCAACACGAGAGTCCCCGCGACCA AATTGGCAAGGCTTTATGCAAACTGCTGCAGTACCTCAAAATAGCGACGA TCCGTTTTCAAAAGCATCAGTAAAATTCCTGCCGATTATCGATCTAAGCT CTTCGGATGAAACTTGTCTTTATTCGACACTCCTATTTGTCAAAGATGAA GCAAAAAAGCAAAAGATTGAGGTACCTTGTGTAACATTTGATCAACCTTT GTGGCAGAAGGCAATTGGAATAGTGGAAGAAAAAAACCTTGATATAGTCT GTCGGCTCGGTGGGTTTCATACACTGATGAGCTTTCTGGGTAGTGTTGGA AAGGTGATGATGGGCTCTGGGCTTGAAGAGTTGTTTGAAGAAGTGTATTC GGAAGATACCGTGAAGCACATGATCTCGGGAAAGGCTTATGCTAGAGCTT TGAGGGCCCATTTGATGACACAGAGTGCATTGGTTGAACACCTAGTTGAG ATCATGGAAGATGAAGGAAAATTACAACCAACAGATAAGTTCCAGTCATG CTACTCCAAACTTTTAAAAGGAGCCCTATCAAATGAAGATCTTGAAGAAT TTCAGAATGGAGAGCACGCACAATCATTCAATAAAGAAATGCAGAAATTA ACAAGCCGTTTAAGAGAAGATTCGCGGACAGCAAAGCTATGGATCCAATA CATCGACTACGTCAACATAATAAAGGATTTCATCATCGCTGAAAGAACCT CTGATTGGCAGCTCCACCTAACAACGTTATCAAAGATGCTCAATCTTTTA GCAGCGACGGGCCATGTACACTACGCCAGGAGTGCTAGAATGTACATACA GCAAATGTCAGAACTGTCGTCGAAATATCCATACCTGTTTAACAAGTTTT CGAGTGGTCATCATGCCGTGAGGAGATCAAATCGATACTGGGCTGGTCTT TGGTCCGATCTTGTCATTGAGCAGACACTTATGAGGTCAATAAAAAGCCG TGGTGGATTGACAAGAGGTAGGGGAATGGAAGAGAATGTTCGTCAACTTT GGGTTTCAAGCATGAGCTATTGTGNGTCAAAGATGAAGCAAAAAAGCAAA AGATTGAGGTACCTTGTGTAACATTTGATCAACCTTTGTGGCAGAAGGCA ATTGGAATAGTGGAAGAAAAAAACCTTGATATAGTCTGTCGGCTCGGTGG GTTTCATACACTGATGAGCTTTCTGGGTAGTGTTGGAAAGGTGATGATGG GCTCTGGGCTTGAAGAGTTGTTTGAGGAAGTGTATTCGGAAGATACCGTG AAGCACATGATCTCGGGAAAGGCTTATGCTAGAGCTCTGAGGGCCCATTT GATGACGCAGAGTGCATTGGTTGAACACCTAGTTGAGATCATGGAAGATG AAGGAAAATTACAACCAACAGATAAGTTCCAGTCATGCTACTCCAAACTT TTAAAAGGAGCCCTATCAAATGAAGATCTTGAAGGATTTCAGAATGGAGA GCACGCACAATCATTCAATAAAGAAATGCAGAAATTAACAAGCCGTTTAA GAGAAGATTCGCGAACGGCAAAGCTATGGATCCAATACATCGACTACGTC AACATAATAAAGGATTTCATCATCGCTGAAAGAACCTCTGATTGGCAGCT CCACCTAACAACGTTATCAAAGATGCTCAATCTTTTAGCAGCGACGGGCC ATATACACTACGCCAGGAGTGCTAGAATGTACATACAGCAAATGTCAGAA CTGTCGTCGAAATATCCATACCTGTTTAACAAGTTTTCGAGTGGTCATCA TGCCGTGAGGAGATCAAATCGATACTGGGCTGGTCTTTGGTCCGATCTTG TCATTGAGCAGACACTTATGAGGTCAATAAAAAGCCGTGGTGGATTGACA AGAGGTAGGGGAATGGAAGAGAATGTTCGTCAACTTTGGGTTTCAAGCAT GAGCTATTGTGCAGCAGTTCACGATGCCATGACAAGCTTGACTGGAGTGA AGGCTCAAAGCAGTGATCAACACCAAGAGATGGGGTTTTCACGCATCAAA ACTGACTTCAAAGATTCTCTCAAGTTCTTTTGTTGGTTGGAAAAACGGAA CCCTTTTGTTTACGAGGATGCCCACTTACATTCCTTATCCTCTGGCGTAA TTGCAGTTATCGGTCAAGACAACGTCAACTGTGATGAAGCTGAGGTGGTT GGAGGGAGGATTCAAAGCTCATTAGATGGGAAATCATTCACTGACGCTTC AATTAAACGAAAGGACGAAGTGAAGTCTCTCGCTGCCATTGTGAATTCAG TAAACGTAGATGATGAAGCAATTGCTGTAGACTCCACAAGTCTTTTCACA AGACTAGCGGCAGTGGCGCAACGAGAAGAAGATGTCGAGAAATACTTTGA ATATGAGTTGACACAATTCCCTGAAGCCCTATTCAACCGTGGTTTGATGA GAAAACCAGATAAAGCTTCATTAAGGAACACCATCCTCACAGAAGAAAAG ACTTGTCATCCAGATGGGAAGTATGTTATCGATGGTGGTGCCTTGATACA TCGAGTGAGTTGGAAAAAAGGAATGACTTTCAAAGAAATCGCACGAAACC ATGTGTCATATGTCAGGAGCAATTATGGAAGCTGTTTCATTGTCTTTGAT GGCTACAACAATCCAACGTCGATTAAAGCAAATGAGCATCAACGCCGCCA GAAGACTCATGGCTCTTGTCCTGATATTGAGATTTTTCCTGACAACGAAT CAAAATATAACCGAGAGCGTTTTCTTTCCAATTGGAAGAACAAACAGCAG CTTATTGCACTCATCACAGATTCTCTTCGCTTGAATGGTCAGAATGTTTA TGTATGCGAAGGAGATGCGGATACTAAAATTGTCTCGACAGCTTTGGAAG TATCAAAAGGTGAGCCAACAATAGTGGTTGCTGACGATACCGATGTTGCT GTTATGATGGCATATCATTGGACAAAAGACCTCAAACCGTTATTGTTTCT CTCAGAACGGACAAAGAAATGCTGGGACATTGGTGCATGTCAAACGGAAT TAGGTGTAAATAAGGAGCACCTTTTATTCATTCATGCATGGACGGGCTGT GATTCTACTTCCGCTATCTGTGGCAAAGGAAAAGTTAGTTTTTTCAACCT CATCAAGAAATCGGAAGTCCTACGCGAGGTTTCCGAAATCTTTTCTGACT TTTGGACCAGTAAAGAACAAATTTATGAGGCATCAATCAACGCATTCTTG GAGCTCTATGGTGGAAAACCTGGCATGTCACTTTCATCTTTGAGGTAACC TGCCTTAAAATTGTAAAATTGCTATGATGGTTTATCATTTGATACTTTGT TATCAATGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040539TCONS_00040539Clytia hemisphaericatranscript
TCONS_00040538TCONS_00040538Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040538-proteinTCONS_00040538-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002460supercontigsc0002460:170..5128 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.24 0.37 0.44 0.38 0.29 0.6 0.62 0.46 0.53 0.13 0.52 0.21 0.22 0.21 0.22 0.23 0.11 0.72 0.38 0.2 0.34 0.1 0.18 1.15 0.97 0.13 0.09 0.17 0.04