XLOC_024542 (gene) - C. hemisphaerica

Overview
NameXLOC_024542
Unique NameXLOC_024542
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002411:3444..5981+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024542 ID=XLOC_024542|Name=XLOC_024542|organism=Clytia hemisphaerica|type=gene|length=2538bp|location=Sequence derived from alignment at sc0002411:3444..5981+ (Clytia hemisphaerica)
NNCTGACAAAATCGTTAACAAATtgacaaagataaaaaacataatgaaag
aaaatattaaaggtgcttttatatatattttttttatttagactgatttt
ttttttactttgaatgaaAGCATACACCCGATGATCGGCTTCAAGGCGTG
AgaaagaaaaacgtttttttatttgttagaaTTTGGCATACTAACGAACT
TATTAAAAAGTagttattgtttttcttttatattcagGAACAACTACTGT
GGACGATAAAAGTGACAGTAAAAATGAGGTATACCCTTTAGCAATTTTGT
TTCTGGAATTTTCGATGTTTTGCCAAGTAAATAAAAAGGCACGTGAAGTA
GAACACCTACACAGTATGCCATACtgaaaaccattaaaaaaccattaaaa
aaccattataattttttgttgttttttaattcCTAGTTAATTTTAATTTC
GATTTTAGATAATGCTCTCACCCGCTGCTCGAAATTATTGCTCAAAACTG
CCACCAAAGGATGGTTATTGGTTTAAGCAGGTGAGATATATTTAAATTCC
TGCGATATATTCTCAATTTCGAAATGAGTCATTCGAGAAGGAGTGATAAA
AAAGATGGGTAATATTTTTTTAGTCCTTGACTAAAGAAATTGATTGTTTA
ATTTCATACTTTAGGGATATTTACGCGTAAAACGAAAAATTGTTAATGAT
GACGATGGCGAGGATGATGACGGGGTTGATAGCGAACATGATACCAAGCA
TAATACCGAGCATGAGGATGTTGACAGTGAACATTTCATCGTTGAGGAAT
CGCATCGTGGTAAGATTGTCTTTAGTGTACCAATGGTAACATGGAATTAT
AATTGAATCCCTCCTCTCTATAAACCTCATTTTACCCATTTTACTTACTT
TGTTTAGAACGAACTTGCTTTTTGGACCTACCTCGGAGGTCCTTTAAATT
AACCGATGTTCGTGTGTTCGTTCgtttgttaccagcttttctcgggattg
gcccattagttttttctgattcccaaaaagtgacggagcccgattctCGA
AACAAAATTTCCGGCGGAAAATCCCGGAAATCGCTGAATTTCCTAATATT
TTATAGCAATGCTGGAccatataaatttttttcagtccctttgcgttttt
attttctttttctatttccATTCTATATTTActattaggtaggtccattt
tgCATTCTGTTTGTTTGTATTTTACTGATTGCCTGAAACGGCTTAATATC
AATATATCTCGATTCATATAATTGTTATTTTCGAATCAGTTTCACCGCTT
GACGAATCTACAGAAAAACATCAGTCGTTCCCAAATGCTGTCAATGTAGT
GAGATCAGATAGCaccgaaaatgaaaaactttctggTAAGTTATAGAAAT
CTTTATATACGataacatgaaaataaaatgaaacctctctctctttctct
ctctctctctctctctctgccaatcttaaaaaattattttacttgCTTCG
TTTCGGACAAAAGTCCTTGCTTTTATGTATTTTACTGATTGCCTGAAGCT
GGGCTTAATATCAATATATCTCGATTCATATAATTGTTATTTTCGANGCT
TCGTTTCGGACAAAAGTCCTTGCTTTTATGTATTTTACTGATTGCCTGAA
GCTGGGCTTAATATCAGTATATCTCGATTCATATAATTGTTATTTTCGAA
TCAGTTTCACCACTTGACGAATCTACAGAAGAACATCAGTCGTTCCCAAA
TGCTGCCAACGTGTTGAAATCAGATTGCAACGAACAGAAAATTGAAAGGC
CATTTTTGCATTCAAAAATGATTGGCGTATTTCCTAGTGGTAAGATTGTC
TTGAAAAacctcggggggggggggaaaagaAAANgaaaacccgggggggg
gggggtaacaGAAAATCATAGTGAAACCTCTTCGTTAATTTTAGTATAGC
TTTTTACTTGTTtggataaaaactcctatttTGTCTGTATTGATTGCCTG
AAACTGGGCACAATATCAATATTTCTCGATTCATATAATTGTTATTTTCG
AATCAGTTGCACCGCTTGACGAATCTACAGAAAAACATCAGTCGTTCCTA
AATGCTGCCAATGTAGTGAGATCAGATAGCAccgaaaattaaaaactttc
tgGTAAGTTATAGAAATCTTTATATACGATaacatgaaattaaaatgaaa
cctctctctctctctctctctctgccAATCTTAGAATATTATTTTACTTA
TATTTACAATATTTCTCAATTTATATATACTATTGTTTCAATATCAGTTT
CAGCATTTGAcgaatcaaaagaaaatcatcaGTCGTTCTTAAATGCTGAC
AGCTCAAAATCAAAACGAAAGAAACCACTGTCGATCAAGAATAAAGGTTT
GTAATTCTCGACAATACTTTGATGTCAGTTTACTTCTACTAAATCAGTAC
CTAAATTATGTGGAAATAAGACCGCAGCGTTTGCAATCTGATTAGAATCT
TTTCATTTGCTGACATTCATGGGGGCGTACCAGTTTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040380TCONS_00040380Clytia hemisphaericatranscript
TCONS_00040381TCONS_00040381Clytia hemisphaericatranscript
TCONS_00040382TCONS_00040382Clytia hemisphaericatranscript
TCONS_00040383TCONS_00040383Clytia hemisphaericatranscript
TCONS_00040384TCONS_00040384Clytia hemisphaericatranscript
TCONS_00040385TCONS_00040385Clytia hemisphaericatranscript
TCONS_00040386TCONS_00040386Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040384-proteinTCONS_00040384-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002411supercontigsc0002411:3444..5981 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.36	1.08	0.62	0.27	29.82	26.62	21.27	27.65	24.67	25.82	24.2	26.09	15.53	18.4	3.93	4.32	2.42	3.53	3.38	2.11	2.74	3.42	1.46	2.04	11.73	24.02	0.81	1.15	0.61	0.97