XLOC_024186 (gene) - C. hemisphaerica

Overview
NameXLOC_024186
Unique NameXLOC_024186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002248:145..4467+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024186 ID=XLOC_024186|Name=XLOC_024186|organism=Clytia hemisphaerica|type=gene|length=4323bp|location=Sequence derived from alignment at sc0002248:145..4467+ (Clytia hemisphaerica)
cAAATTTATTTGGTGATACTTCGGTTTATTGtgataaatcaaattttttt
cgttttcttctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATAT
CAACGTACAACAAATGATCAAAGGTAATTTACTATTGCTCTTATTGCtct
tatttttatcataaaGGGTATAAGAGTACCTTCTTCTAGTTTTTATTATA
AAGGGTATAAGGGTACCTTACCTAGGAGTAATAACTGCAATGTTTTTCTC
TATAATCTATAATGATATTTCACTTTCATCATATTTCAATTATGCAACAG
TCTCTTTTCTAGAaatgaatgaaacaaaaatgtATGAAAAATAACAAGGA
ATAAAAGAAAGTAAAGTTACAAGTAAAATCTAAAccttaaattgaaaata
aatatttattcTAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTG
GTAGGTCCTTTTCGtctaaaaaagttgattttgttcTATACTAAATCNtt
aaattgaaaataaatatttattcTAGATTTTGGAGTTTGTACTGATGTAC
CTAGATGTTTTGGTAGGTCTTTTTCGtctaaaaaagttgattttgttcTA
TACTAAATCCCTATTCCAATAAGGTAAATGCGTGTGATCACGATTTTGGG
TACTGCTAATGCAGATCTGTATTTCAATATTCTCTTGTTTTTTAGATTAC
CCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAAGTAAgatgatttt
gttttgaagtaTTTTTGAACTATATCTGTTGTAgaatttttttgggggga
gtTGGTAAGGGTGATTATTGGTGGgcttttttcaaataaactcAATTTGG
AAACTCTTCTTGCTAAACTATTGTATCGTTTTTAGTGCTTAAAAAGATTT
GGAATACTGACGAAGCAGCCGTTGGGATCATCATCTGTTGTATTGACAGG
TTTTACATAACAGATGGGGACTTGAAAACGTTAAAATCTGGAAAGCAATT
GAATGACCAAGTTATTGATGCATATATTTGCCAATTGACAAAGAACTTGG
TATTATTTAAATACTGATAATTGTTTCTCCTCTTGACCTTTTCGATTGTC
TTCGTTGTTCATTAGCTCATTGTAGATTTATAAATGGACAGTTGTGATTT
GTTTATGCTTTAACTTGCTTTTATTTTTGTTTCAGCCAGTTGAAGACGGA
ATTCAACACATTCAGTCCCACAAACTTACAAAACTTTTCAATAAAGGCAC
GATCACATTCGGTGTGAAAGAAAAGGTTTCTATATTTCAAGCTATTTCAA
AATACTGAAAGCAACAAAATTATCATTATTGTTCACTTTTTGGCAAATAT
GCCACACTGATACCATTAATTTTTGTTTTCTGAAAACCAACTACCCATTA
TTACCATTTTGCCATTAATTAATATTTTAGTCTGATCGATTTTATCACCC
TTGTACCTTTTATGTTTTCTCTACGTGCGTAATAATGGTTTATTGTCTTC
AACCTTTGTACAGAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCAT
TTAATATCAATAGTCATTGGATGTTTTTGGTATGTTCTATTTTCTCAATT
TTAATTTCTCCTTTACAGCCTGCCAAATTGTACTACCGAGAGGAACGAAT
TTGTTATTTTTAAATTGCTTCGTTTTTAAACTTGTAGTCTCTACTGAGTT
CGGTCCAGTGAGAACCAAAACAAAAAAAGTTCACAAGCGAAAAATGACTC
TGCGAATTTCTTTGTAAGTTATAATATCCAGAAAAAAACAATTCATGATA
AACGAAAATCAAAATCCGCTCTTTGAACTTTTTATACGATTTACATAGGT
GATTTACCCGGCTTTAAAAGAAGTCAAACTGTACAATTCGTTGGGTTTGG
GACATTCCGCTGGTGTTGAAACGGATATTCTACAAAAATGGAGGTAACCT
TTTTTTTACTAAGTAAATATCTTTCTCTTTAGATGCTCAAAATACGCACT
ATAACTCGTGAAGTAATCAATTTGTAATCATATTTTCAATATTTTTTATT
CTGTACTGGCTTTAACCTTTTTCATTGAAATTTTAGGGTTGCTTGCAAAA
TACTTGACTTGGACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGCTATG
CAAGAAGACACAGTATCTCGTGGTGCATTCTGCCTTAGCGTATGTTATAG
ATTTTTTAAAGTTTTTTTTCTATATGGAAGACCATTGTGAATAATAAATT
AGGCGAAAAGTTGAATTTACAGTTTTGAAGAAATAGTATTGCAATATTTC
TACCTATCGGTAGTATCCCTTTGAGTGTTATATATTCACACGCTTTTGAT
AAGAATATACTTTATGAGAATATTCATGATGAAATTGGCTAAAAAGTTGA
GAATGTCCAAAGAAAAAATTAAGAATATTTATGATGAAATGTAACCACAT
TCTTATAAAAAAGTGCATTCAGCGTGTCCGAAAAAAAGTGGAACAGAATT
TGTGTAAAGAAAAATTCTAATGATTTTTAACCCTACAGTAAtaaactttc
cttttttttttacttatcgAAAAAGAACTTAATTACCCGGTAAaaccatt
ttgagaattttcttcCATTAGAccatgagcatttttatttacaCCATTAT
TTTTAGTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAAGCGTT
GTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGGACATGCTATCA
TCGAGAAATCAGGTAAGAATAAGTGTCAAACTTCTTCATACATTTTACGG
ATATACtttttgatttatcaaaaatgatagtacttttttatttataaaaa
atactGTATTACTTTATCTTTTTAGGAGGTGGGTTATGGTGTCACAAGAC
ATGTAGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTATcctggattt
catttttctatACTTTCCAAATTTCTAAACCTATAACTAACAAATCAAAT
CTTGGCCTGTAAGAGGTGAAACCCTactgataaaaatatttttcataggT
AAAGAAATTCTGTTTTTCGTCATTTTTATAGATCCCATCCTGAACAAAAT
ATTTATGTACTGCACACAAATCAACGTAAAATTCGTAAGCTTTTCCCCCA
CTTAGGTTCGATGCTTGAAGTGCATTCCTGAAAGGTATTATCATAAGAAG
TGTCTTATCAAGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAGACTCGT
TGTAAGTGTGCTTGATCTCCTAATTTCTAGTACCTTATAGTCTGGAATAA
GCGGGATGGGTGGAAAATGTTTCAAAATGTTATAGTAGAGAGGTTTTGGG
GGATTATGGCAGAGGGGAGTTGGATGGGTTTCTAAAGATGTATGAGTACT
AAAATAACTTCAGTGTGCTTGGTTTCAAAATACATTTATATCAAATTACC
ATTATATTCCTTCTTTCAGACCGCACAGGAGATGCAATCATTAAAGGAAG
GGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTGAAGGTGTGTCAT
GGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGCACGATATTTGCA
TCGCACGTAAAGAGAAGAGGAAGAAGTCTGGCTTAACCAACTCTAATTCC
TTCGTTCTGACAAATGTTCATTATCACCCTAGACGCTCCTGTATAAATGT
CAATCCATCTTTCTTGAAAATATCGAAGGCTATAAAACTTGACCAGACCT
ATACAacttttttgaaggaaaatggtaTCTTTGGCtagtagtagggggaa
attttttttttttaagtcgcTCGATTATGTTTTGGTCAAAgaacttgtta
tacattttttgaaagctaacgggtaggggaatcaaaatagcttagattcc
aattttttttttcggacactttggtatgattttcggacaaatacgacggt
ctcaggcaaaaatcatagggtcaaaaattaatgaaaattctAGCTtaaga
aaacggagacctgttgtatatttttgaaaatctctcaaaaaattaagatc
agaggtatattgcgagtataggtgattttaGTACCTAGCTCGAGAGAtcg
agcttcaaaaagcgcaaaaactggacaagacaactgtttctggctgaaag
acactgtttttaagggtttCTTTTCTGACTAATACAATCGAGCGACTTTA
CAAAATACCCTCTACTATAGTGTTgttattaagggctctgaccatagtga
atttttaatatttgccacttacaaaatataaagttctacttgatgtagcc
cacaaaactgtggcatgttatAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039936TCONS_00039936Clytia hemisphaericatranscript
TCONS_00039937TCONS_00039937Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039936-proteinTCONS_00039936-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002248supercontigsc0002248:145..4467 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.14	0.46	0.19	10.03	10.15	8.23	12.06	5.74	5.44	6.29	4.58	5.57	5.42	0.14	0.22	0.85	0.6	0.23	0.25	0.85	0.67	0.5	0.69	2.89	8.4	0.36	0.14	0.99	1.16