TCONS_00039936 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00039936
Unique Name	TCONS_00039936
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1837

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0002248:145..4467+
coding sequence from alignment at sc0002248:145..4467+

transcript sequence

>TCONS_00039936 ID=TCONS_00039936|Name=TCONS_00039936|organism=Clytia hemisphaerica|type=transcript|length=1837bp
cAAATTTATTTGGTGATACTTCGGTTTATTGtgataaatcaaattttttt
cgttttcttctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATAT
CAACGTACAACAAATGATCAAAGATTTTGGAGTTTGCACTGATGTACCTA
GATGTTTTGATTACCCTGATTTTTGTTTCACCAACTCAACGCCAAATGAA
ATGCTTAAAAAGATTTGGAATACTGACGAAGCAGCCGTTGGGATCATCAT
CTGTTGTATTGACAGGTTTTACATAACAGATGGGGACTTGAAAACGTTAA
AATCTGGAAAGCAATTGAATGACCAAGTTATTGATGCATATATTTGCCAA
TTGACAAAGAACTTGCCAGTTGAAGACGGAATTCAACACATTCAGTCCCA
CAAACTTACAAAACTTTTCAATAAAGGCACGATCACATTCGGTGTGAAAG
AAAAGAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCATTTAATATC
AATAGTCATTGGATGTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTCAA
ACTGTACAATTCGTTGGGTTTGGGACATTCCGCTGGTGTTGAAACGGATA
TTCTACAAAAATGGAGGGTTGCTTGCAAAATACTTGACTTGGACGGGAGC
TGGAAGATTTCTTCTCAAATCAGTGCTATGCAAGAAGACACAGTATCTCG
TGGTGCATTCTGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTG
TCAAGAAAGCGTTGTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATC
GGACATGCTATCATCGAGAAATCAGGAGGTGGGTTATGGTGTCACAAGAC
ATGTAGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTTCGATGCTTGA
AGTGCATTCCTGAAAGGTATTATCATAAGAAGTGTCTTATCAAGACAAGA
GAAAGACTTGCTAAAGCCAGAGAAAGACTCGTTACCGCACAGGAGATGCA
ATCATTAAAGGAAGGGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGG
TGAAGGTGTGTCATGGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACC
GCACGATATTTGCATCGCACGTAAAGAGAAGAGGAAGAAGTCTGGCTTAA
CCAACTCTAATTCCTTCGTTCTGACAAATGTTCATTATCACCCTAGACGC
TCCTGTATAAATGTCAATCCATCTTTCTTGAAAATATCGAAGGCTATAAA
ACTTGACCAGACCTATACAacttttttgaaggaaaatggtaTCTTTGGCt
agtagtagggggaaattttttttttttaagtcgcTCGATTATGTTTTGGT
CAAAgaacttgttatacattttttgaaagctaacgggtaggggaatcaaa
atagcttagattccaattttttttttcggacactttggtatgattttcgg
acaaatacgacggtctcaggcaaaaatcatagggtcaaaaattaatgaaa
attctAGCTtaagaaaacggagacctgttgtatatttttgaaaatctctc
aaaaaattaagatcagaggtatattgcgagtataggtgattttaGTACCT
AGCTCGAGAGAtcgagcttcaaaaagcgcaaaaactggacaagacaactg
tttctggctgaaagacactgtttttaagggtttCTTTTCTGACTAATACA
ATCGAGCGACTTTACAAAATACCCTCTACTATAGTGTTgttattaagggc
tctgaccatagtgaatttttaatatttgccacttacaaaatataaagttc
tacttgatgtagcccacaaaactgtggcatgttatAC

Run BLAST on NCBI

protein sequence of TCONS_00039936-protein

>TCONS_00039936-protein ID=TCONS_00039936-protein|Name=TCONS_00039936-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
NLFGDTSVYCDKSNFFRFLLSEDAVSTANIRNINVQQMIKDFGVCTDVPR
CFDYPDFCFTNSTPNEMLKKIWNTDEAAVGIIICCIDRFYITDGDLKTLK
SGKQLNDQVIDAYICQLTKNLPVEDGIQHIQSHKLTKLFNKGTITFGVKE
KKSLQSSKMIVGAFNINSHWMFLVIYPALKEVKLYNSLGLGHSAGVETDI
LQKWRVACKILDLDGSWKISSQISAMQEDTVSRGAFCLSFAESVVLGEPV
KKALSKRNVADFRLKIGHAIIEKSGGGLWCHKTCRICRADKQENLVRCLK
CIPERYYHKKCLIKTRERLAKARERLVTAQEMQSLKEGEVLLRKRIDLKV
KVCHGCNGSIASGWSTARYLHRT

Run BLAST on NCBI

transcript from alignment at sc0002248:145..4467+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00039936 ID=TCONS_00039936|Name=TCONS_00039936|organism=Clytia hemisphaerica|type=transcript|length=4323bp|location=Sequence derived from alignment at sc0002248:145..4467+ (Clytia hemisphaerica)
cAAATTTATTTGGTGATACTTCGGTTTATTGtgataaatcaaattttttt
cgttttcttctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATAT
CAACGTACAACAAATGATCAAAGGTAATTTACTATTGCTCTTATTGCtct
tatttttatcataaaGGGTATAAGAGTACCTTCTTCTAGTTTTTATTATA
AAGGGTATAAGGGTACCTTACCTAGGAGTAATAACTGCAATGTTTTTCTC
TATAATCTATAATGATATTTCACTTTCATCATATTTCAATTATGCAACAG
TCTCTTTTCTAGAaatgaatgaaacaaaaatgtATGAAAAATAACAAGGA
ATAAAAGAAAGTAAAGTTACAAGTAAAATCTAAAccttaaattgaaaata
aatatttattcTAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTG
GTAGGTCCTTTTCGtctaaaaaagttgattttgttcTATACTAAATCNtt
aaattgaaaataaatatttattcTAGATTTTGGAGTTTGTACTGATGTAC
CTAGATGTTTTGGTAGGTCTTTTTCGtctaaaaaagttgattttgttcTA
TACTAAATCCCTATTCCAATAAGGTAAATGCGTGTGATCACGATTTTGGG
TACTGCTAATGCAGATCTGTATTTCAATATTCTCTTGTTTTTTAGATTAC
CCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAAGTAAgatgatttt
gttttgaagtaTTTTTGAACTATATCTGTTGTAgaatttttttgggggga
gtTGGTAAGGGTGATTATTGGTGGgcttttttcaaataaactcAATTTGG
AAACTCTTCTTGCTAAACTATTGTATCGTTTTTAGTGCTTAAAAAGATTT
GGAATACTGACGAAGCAGCCGTTGGGATCATCATCTGTTGTATTGACAGG
TTTTACATAACAGATGGGGACTTGAAAACGTTAAAATCTGGAAAGCAATT
GAATGACCAAGTTATTGATGCATATATTTGCCAATTGACAAAGAACTTGG
TATTATTTAAATACTGATAATTGTTTCTCCTCTTGACCTTTTCGATTGTC
TTCGTTGTTCATTAGCTCATTGTAGATTTATAAATGGACAGTTGTGATTT
GTTTATGCTTTAACTTGCTTTTATTTTTGTTTCAGCCAGTTGAAGACGGA
ATTCAACACATTCAGTCCCACAAACTTACAAAACTTTTCAATAAAGGCAC
GATCACATTCGGTGTGAAAGAAAAGGTTTCTATATTTCAAGCTATTTCAA
AATACTGAAAGCAACAAAATTATCATTATTGTTCACTTTTTGGCAAATAT
GCCACACTGATACCATTAATTTTTGTTTTCTGAAAACCAACTACCCATTA
TTACCATTTTGCCATTAATTAATATTTTAGTCTGATCGATTTTATCACCC
TTGTACCTTTTATGTTTTCTCTACGTGCGTAATAATGGTTTATTGTCTTC
AACCTTTGTACAGAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCAT
TTAATATCAATAGTCATTGGATGTTTTTGGTATGTTCTATTTTCTCAATT
TTAATTTCTCCTTTACAGCCTGCCAAATTGTACTACCGAGAGGAACGAAT
TTGTTATTTTTAAATTGCTTCGTTTTTAAACTTGTAGTCTCTACTGAGTT
CGGTCCAGTGAGAACCAAAACAAAAAAAGTTCACAAGCGAAAAATGACTC
TGCGAATTTCTTTGTAAGTTATAATATCCAGAAAAAAACAATTCATGATA
AACGAAAATCAAAATCCGCTCTTTGAACTTTTTATACGATTTACATAGGT
GATTTACCCGGCTTTAAAAGAAGTCAAACTGTACAATTCGTTGGGTTTGG
GACATTCCGCTGGTGTTGAAACGGATATTCTACAAAAATGGAGGTAACCT
TTTTTTTACTAAGTAAATATCTTTCTCTTTAGATGCTCAAAATACGCACT
ATAACTCGTGAAGTAATCAATTTGTAATCATATTTTCAATATTTTTTATT
CTGTACTGGCTTTAACCTTTTTCATTGAAATTTTAGGGTTGCTTGCAAAA
TACTTGACTTGGACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGCTATG
CAAGAAGACACAGTATCTCGTGGTGCATTCTGCCTTAGCGTATGTTATAG
ATTTTTTAAAGTTTTTTTTCTATATGGAAGACCATTGTGAATAATAAATT
AGGCGAAAAGTTGAATTTACAGTTTTGAAGAAATAGTATTGCAATATTTC
TACCTATCGGTAGTATCCCTTTGAGTGTTATATATTCACACGCTTTTGAT
AAGAATATACTTTATGAGAATATTCATGATGAAATTGGCTAAAAAGTTGA
GAATGTCCAAAGAAAAAATTAAGAATATTTATGATGAAATGTAACCACAT
TCTTATAAAAAAGTGCATTCAGCGTGTCCGAAAAAAAGTGGAACAGAATT
TGTGTAAAGAAAAATTCTAATGATTTTTAACCCTACAGTAAtaaactttc
cttttttttttacttatcgAAAAAGAACTTAATTACCCGGTAAaaccatt
ttgagaattttcttcCATTAGAccatgagcatttttatttacaCCATTAT
TTTTAGTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAAGCGTT
GTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGGACATGCTATCA
TCGAGAAATCAGGTAAGAATAAGTGTCAAACTTCTTCATACATTTTACGG
ATATACtttttgatttatcaaaaatgatagtacttttttatttataaaaa
atactGTATTACTTTATCTTTTTAGGAGGTGGGTTATGGTGTCACAAGAC
ATGTAGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTATcctggattt
catttttctatACTTTCCAAATTTCTAAACCTATAACTAACAAATCAAAT
CTTGGCCTGTAAGAGGTGAAACCCTactgataaaaatatttttcataggT
AAAGAAATTCTGTTTTTCGTCATTTTTATAGATCCCATCCTGAACAAAAT
ATTTATGTACTGCACACAAATCAACGTAAAATTCGTAAGCTTTTCCCCCA
CTTAGGTTCGATGCTTGAAGTGCATTCCTGAAAGGTATTATCATAAGAAG
TGTCTTATCAAGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAGACTCGT
TGTAAGTGTGCTTGATCTCCTAATTTCTAGTACCTTATAGTCTGGAATAA
GCGGGATGGGTGGAAAATGTTTCAAAATGTTATAGTAGAGAGGTTTTGGG
GGATTATGGCAGAGGGGAGTTGGATGGGTTTCTAAAGATGTATGAGTACT
AAAATAACTTCAGTGTGCTTGGTTTCAAAATACATTTATATCAAATTACC
ATTATATTCCTTCTTTCAGACCGCACAGGAGATGCAATCATTAAAGGAAG
GGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTGAAGGTGTGTCAT
GGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGCACGATATTTGCA
TCGCACGTAAAGAGAAGAGGAAGAAGTCTGGCTTAACCAACTCTAATTCC
TTCGTTCTGACAAATGTTCATTATCACCCTAGACGCTCCTGTATAAATGT
CAATCCATCTTTCTTGAAAATATCGAAGGCTATAAAACTTGACCAGACCT
ATACAacttttttgaaggaaaatggtaTCTTTGGCtagtagtagggggaa
attttttttttttaagtcgcTCGATTATGTTTTGGTCAAAgaacttgtta
tacattttttgaaagctaacgggtaggggaatcaaaatagcttagattcc
aattttttttttcggacactttggtatgattttcggacaaatacgacggt
ctcaggcaaaaatcatagggtcaaaaattaatgaaaattctAGCTtaaga
aaacggagacctgttgtatatttttgaaaatctctcaaaaaattaagatc
agaggtatattgcgagtataggtgattttaGTACCTAGCTCGAGAGAtcg
agcttcaaaaagcgcaaaaactggacaagacaactgtttctggctgaaag
acactgtttttaagggtttCTTTTCTGACTAATACAATCGAGCGACTTTA
CAAAATACCCTCTACTATAGTGTTgttattaagggctctgaccatagtga
atttttaatatttgccacttacaaaatataaagttctacttgatgtagcc
cacaaaactgtggcatgttatAC

Coding sequence (CDS) from alignment at sc0002248:145..4467+

>TCONS_00039936 ID=TCONS_00039936|Name=TCONS_00039936|organism=Clytia hemisphaerica|type=CDS|length=13464bp|location=Sequence derived from alignment at sc0002248:145..4467+ (Clytia hemisphaerica)
AATTTATTTGGTGATACTTCGGTTTATTGtgataaatcaaatttttttcg
ttttcttctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATATCA
ACGTACAACAAATGATCAAAGATTTTGGAGTTTGCACTGATGTACCTAGA
TGTTTTGATTACCCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAAT
GCTTAAAAAGATTTGGAATACTGACGAAGCAGCCGTTGGGATCATCATCT
GTTGTATTGACAGGTTTTACATAACAGATGGGGACTTGAAAACGTTAAAA
TCTGGAAAGCAATTGAATGACCAAGTTATTGATGCATATATTTGCCAATT
GACAAAGAACTTGCCAGTTGAAGACGGAATTCAACACATTCAGTCCCACA
AACTTACAAAACTTTTCAATAAAGGCACGATCACATTCGGTGTGAAAGAA
AAGAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCATTTAATATCAA
TAGTCATTGGATGTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTCAAAC
TGTACAATTCGTTGGGTTTGGGACATTCCGCTGGTGTTGAAACGGATATT
CTACAAAAATGGAGGGTTGCTTGCAAAATACTTGACTTGGACGGGAGCTG
GAAGATTTCTTCTCAAATCAGTGCTATGCAAGAAGACACAGTATCTCGTG
GTGCATTCTGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTC
AAGAAAGCGTTGTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGG
ACATGCTATCATCGAGAAATCAGGAGGTGGGTTATGGTGTCACAAGACAT
GTAGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTTCGATGCTTGAAG
TGCATTCCTGAAAGGTATTATCATAAGAAGTGTCTTATCAAGACAAGAGA
AAGACTTGCTAAAGCCAGAGAAAGACTCGTTACCGCACAGGAGATGCAAT
CATTAAAGGAAGGGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTG
AAGGTGTGTCATGGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGC
ACGATATTTGCATCGCACGTAAAATTTATTTGGTGATACTTCGGTTTATT
GtgataaatcaaatttttttcgttttcttctaAGCGAAGACGCAGTATCA
ACAGCAAATATTCGAAATATCAACGTACAACAAATGATCAAAGATTTTGG
AGTTTGCACTGATGTACCTAGATGTTTTGATTACCCTGATTTTTGTTTCA
CCAACTCAACGCCAAATGAAATGCTTAAAAAGATTTGGAATACTGACGAA
GCAGCCGTTGGGATCATCATCTGTTGTATTGACAGGTTTTACATAACAGA
TGGGGACTTGAAAACGTTAAAATCTGGAAAGCAATTGAATGACCAAGTTA
TTGATGCATATATTTGCCAATTGACAAAGAACTTGCCAGTTGAAGACGGA
ATTCAACACATTCAGTCCCACAAACTTACAAAACTTTTCAATAAAGGCAC
GATCACATTCGGTGTGAAAGAAAAGAAAAGCTTACAAAGTTCCAAGATGA
TAGTGGGTGCATTTAATATCAATAGTCATTGGATGTTTTTGGTGATTTAC
CCGGCTTTAAAAGAAGTCAAACTGTACAATTCGTTGGGTTTGGGACATTC
CGCTGGTGTTGAAACGGATATTCTACAAAAATGGAGGGTTGCTTGCAAAA
TACTTGACTTGGACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGCTATG
CAAGAAGACACAGTATCTCGTGGTGCATTCTGCCTTAGCTTTGCAGAAAG
TGTTGTCCTTGGGGAGCCTGTCAAGAAAGCGTTGTCGAAGAGAAATGTGG
CAGACTTTAGATTAAAAATCGGACATGCTATCATCGAGAAATCAGGAGGT
GGGTTATGGTGTCACAAGACATGTAGGATATGCAGAGCAGACAAGCAAGA
AAACTTGGTTCGATGCTTGAAGTGCATTCCTGAAAGGTATTATCATAAGA
AGTGTCTTATCAAGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAGACTC
GTTACCGCACAGGAGATGCAATCATTAAAGGAAGGGGAAGTTTTGTTGCG
GAAACGCATAGACTTGAAGGTGAAGGTGTGTCATGGGTGCAACGGATCCA
TTGCTAGTGGGTGGTCCACCGCACGATATTTGCATCGCACGTAAAATTTA
TTTGGTGATACTTCGGTTTATTGtgataaatcaaatttttttcgttttct
tctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATATCAACGTAC
AACAAATGATCAAAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTT
GATTACCCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAATGCTTAA
AAAGATTTGGAATACTGACGAAGCAGCCGTTGGGATCATCATCTGTTGTA
TTGACAGGTTTTACATAACAGATGGGGACTTGAAAACGTTAAAATCTGGA
AAGCAATTGAATGACCAAGTTATTGATGCATATATTTGCCAATTGACAAA
GAACTTGCCAGTTGAAGACGGAATTCAACACATTCAGTCCCACAAACTTA
CAAAACTTTTCAATAAAGGCACGATCACATTCGGTGTGAAAGAAAAGAAA
AGCTTACAAAGTTCCAAGATGATAGTGGGTGCATTTAATATCAATAGTCA
TTGGATGTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTCAAACTGTACA
ATTCGTTGGGTTTGGGACATTCCGCTGGTGTTGAAACGGATATTCTACAA
AAATGGAGGGTTGCTTGCAAAATACTTGACTTGGACGGGAGCTGGAAGAT
TTCTTCTCAAATCAGTGCTATGCAAGAAGACACAGTATCTCGTGGTGCAT
TCTGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAA
GCGTTGTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGGACATGC
TATCATCGAGAAATCAGGAGGTGGGTTATGGTGTCACAAGACATGTAGGA
TATGCAGAGCAGACAAGCAAGAAAACTTGGTTCGATGCTTGAAGTGCATT
CCTGAAAGGTATTATCATAAGAAGTGTCTTATCAAGACAAGAGAAAGACT
TGCTAAAGCCAGAGAAAGACTCGTTACCGCACAGGAGATGCAATCATTAA
AGGAAGGGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTGAAGGTG
TGTCATGGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGCACGATA
TTTGCATCGCACGTAAAATTTATTTGGTGATACTTCGGTTTATTGtgata
aatcaaatttttttcgttttcttctaAGCGAAGACGCAGTATCAACAGCA
AATATTCGAAATATCAACGTACAACAAATGATCAAAGATTTTGGAGTTTG
CACTGATGTACCTAGATGTTTTGATTACCCTGATTTTTGTTTCACCAACT
CAACGCCAAATGAAATGCTTAAAAAGATTTGGAATACTGACGAAGCAGCC
GTTGGGATCATCATCTGTTGTATTGACAGGTTTTACATAACAGATGGGGA
CTTGAAAACGTTAAAATCTGGAAAGCAATTGAATGACCAAGTTATTGATG
CATATATTTGCCAATTGACAAAGAACTTGCCAGTTGAAGACGGAATTCAA
CACATTCAGTCCCACAAACTTACAAAACTTTTCAATAAAGGCACGATCAC
ATTCGGTGTGAAAGAAAAGAAAAGCTTACAAAGTTCCAAGATGATAGTGG
GTGCATTTAATATCAATAGTCATTGGATGTTTTTGGTGATTTACCCGGCT
TTAAAAGAAGTCAAACTGTACAATTCGTTGGGTTTGGGACATTCCGCTGG
TGTTGAAACGGATATTCTACAAAAATGGAGGGTTGCTTGCAAAATACTTG
ACTTGGACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGCTATGCAAGAA
GACACAGTATCTCGTGGTGCATTCTGCCTTAGCTTTGCAGAAAGTGTTGT
CCTTGGGGAGCCTGTCAAGAAAGCGTTGTCGAAGAGAAATGTGGCAGACT
TTAGATTAAAAATCGGACATGCTATCATCGAGAAATCAGGAGGTGGGTTA
TGGTGTCACAAGACATGTAGGATATGCAGAGCAGACAAGCAAGAAAACTT
GGTTCGATGCTTGAAGTGCATTCCTGAAAGGTATTATCATAAGAAGTGTC
TTATCAAGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAGACTCGTTACC
GCACAGGAGATGCAATCATTAAAGGAAGGGGAAGTTTTGTTGCGGAAACG
CATAGACTTGAAGGTGAAGGTGTGTCATGGGTGCAACGGATCCATTGCTA
GTGGGTGGTCCACCGCACGATATTTGCATCGCACGTAAAATTTATTTGGT
GATACTTCGGTTTATTGtgataaatcaaatttttttcgttttcttctaAG
CGAAGACGCAGTATCAACAGCAAATATTCGAAATATCAACGTACAACAAA
TGATCAAAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTGATTAC
CCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAATGCTTAAAAAGAT
TTGGAATACTGACGAAGCAGCCGTTGGGATCATCATCTGTTGTATTGACA
GGTTTTACATAACAGATGGGGACTTGAAAACGTTAAAATCTGGAAAGCAA
TTGAATGACCAAGTTATTGATGCATATATTTGCCAATTGACAAAGAACTT
GCCAGTTGAAGACGGAATTCAACACATTCAGTCCCACAAACTTACAAAAC
TTTTCAATAAAGGCACGATCACATTCGGTGTGAAAGAAAAGAAAAGCTTA
CAAAGTTCCAAGATGATAGTGGGTGCATTTAATATCAATAGTCATTGGAT
GTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTCAAACTGTACAATTCGT
TGGGTTTGGGACATTCCGCTGGTGTTGAAACGGATATTCTACAAAAATGG
AGGGTTGCTTGCAAAATACTTGACTTGGACGGGAGCTGGAAGATTTCTTC
TCAAATCAGTGCTATGCAAGAAGACACAGTATCTCGTGGTGCATTCTGCC
TTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAAGCGTTG
TCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGGACATGCTATCAT
CGAGAAATCAGGAGGTGGGTTATGGTGTCACAAGACATGTAGGATATGCA
GAGCAGACAAGCAAGAAAACTTGGTTCGATGCTTGAAGTGCATTCCTGAA
AGGTATTATCATAAGAAGTGTCTTATCAAGACAAGAGAAAGACTTGCTAA
AGCCAGAGAAAGACTCGTTACCGCACAGGAGATGCAATCATTAAAGGAAG
GGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTGAAGGTGTGTCAT
GGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGCACGATATTTGCA
TCGCACGTAAAATTTATTTGGTGATACTTCGGTTTATTGtgataaatcaa
atttttttcgttttcttctaAGCGAAGACGCAGTATCAACAGCAAATATT
CGAAATATCAACGTACAACAAATGATCAAAGATTTTGGAGTTTGCACTGA
TGTACCTAGATGTTTTGATTACCCTGATTTTTGTTTCACCAACTCAACGC
CAAATGAAATGCTTAAAAAGATTTGGAATACTGACGAAGCAGCCGTTGGG
ATCATCATCTGTTGTATTGACAGGTTTTACATAACAGATGGGGACTTGAA
AACGTTAAAATCTGGAAAGCAATTGAATGACCAAGTTATTGATGCATATA
TTTGCCAATTGACAAAGAACTTGCCAGTTGAAGACGGAATTCAACACATT
CAGTCCCACAAACTTACAAAACTTTTCAATAAAGGCACGATCACATTCGG
TGTGAAAGAAAAGAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCAT
TTAATATCAATAGTCATTGGATGTTTTTGGTGATTTACCCGGCTTTAAAA
GAAGTCAAACTGTACAATTCGTTGGGTTTGGGACATTCCGCTGGTGTTGA
AACGGATATTCTACAAAAATGGAGGGTTGCTTGCAAAATACTTGACTTGG
ACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGCTATGCAAGAAGACACA
GTATCTCGTGGTGCATTCTGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGG
GGAGCCTGTCAAGAAAGCGTTGTCGAAGAGAAATGTGGCAGACTTTAGAT
TAAAAATCGGACATGCTATCATCGAGAAATCAGGAGGTGGGTTATGGTGT
CACAAGACATGTAGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTTCG
ATGCTTGAAGTGCATTCCTGAAAGGTATTATCATAAGAAGTGTCTTATCA
AGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAGACTCGTTACCGCACAG
GAGATGCAATCATTAAAGGAAGGGGAAGTTTTGTTGCGGAAACGCATAGA
CTTGAAGGTGAAGGTGTGTCATGGGTGCAACGGATCCATTGCTAGTGGGT
GGTCCACCGCACGATATTTGCATCGCACGTAAAATTTATTTGGTGATACT
TCGGTTTATTGtgataaatcaaatttttttcgttttcttctaAGCGAAGA
CGCAGTATCAACAGCAAATATTCGAAATATCAACGTACAACAAATGATCA
AAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTGATTACCCTGAT
TTTTGTTTCACCAACTCAACGCCAAATGAAATGCTTAAAAAGATTTGGAA
TACTGACGAAGCAGCCGTTGGGATCATCATCTGTTGTATTGACAGGTTTT
ACATAACAGATGGGGACTTGAAAACGTTAAAATCTGGAAAGCAATTGAAT
GACCAAGTTATTGATGCATATATTTGCCAATTGACAAAGAACTTGCCAGT
TGAAGACGGAATTCAACACATTCAGTCCCACAAACTTACAAAACTTTTCA
ATAAAGGCACGATCACATTCGGTGTGAAAGAAAAGAAAAGCTTACAAAGT
TCCAAGATGATAGTGGGTGCATTTAATATCAATAGTCATTGGATGTTTTT
GGTGATTTACCCGGCTTTAAAAGAAGTCAAACTGTACAATTCGTTGGGTT
TGGGACATTCCGCTGGTGTTGAAACGGATATTCTACAAAAATGGAGGGTT
GCTTGCAAAATACTTGACTTGGACGGGAGCTGGAAGATTTCTTCTCAAAT
CAGTGCTATGCAAGAAGACACAGTATCTCGTGGTGCATTCTGCCTTAGCT
TTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAAGCGTTGTCGAAG
AGAAATGTGGCAGACTTTAGATTAAAAATCGGACATGCTATCATCGAGAA
ATCAGGAGGTGGGTTATGGTGTCACAAGACATGTAGGATATGCAGAGCAG
ACAAGCAAGAAAACTTGGTTCGATGCTTGAAGTGCATTCCTGAAAGGTAT
TATCATAAGAAGTGTCTTATCAAGACAAGAGAAAGACTTGCTAAAGCCAG
AGAAAGACTCGTTACCGCACAGGAGATGCAATCATTAAAGGAAGGGGAAG
TTTTGTTGCGGAAACGCATAGACTTGAAGGTGAAGGTGTGTCATGGGTGC
AACGGATCCATTGCTAGTGGGTGGTCCACCGCACGATATTTGCATCGCAC
GTAAAATTTATTTGGTGATACTTCGGTTTATTGtgataaatcaaattttt
ttcgttttcttctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAAT
ATCAACGTACAACAAATGATCAAAGATTTTGGAGTTTGCACTGATGTACC
TAGATGTTTTGATTACCCTGATTTTTGTTTCACCAACTCAACGCCAAATG
AAATGCTTAAAAAGATTTGGAATACTGACGAAGCAGCCGTTGGGATCATC
ATCTGTTGTATTGACAGGTTTTACATAACAGATGGGGACTTGAAAACGTT
AAAATCTGGAAAGCAATTGAATGACCAAGTTATTGATGCATATATTTGCC
AATTGACAAAGAACTTGCCAGTTGAAGACGGAATTCAACACATTCAGTCC
CACAAACTTACAAAACTTTTCAATAAAGGCACGATCACATTCGGTGTGAA
AGAAAAGAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCATTTAATA
TCAATAGTCATTGGATGTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTC
AAACTGTACAATTCGTTGGGTTTGGGACATTCCGCTGGTGTTGAAACGGA
TATTCTACAAAAATGGAGGGTTGCTTGCAAAATACTTGACTTGGACGGGA
GCTGGAAGATTTCTTCTCAAATCAGTGCTATGCAAGAAGACACAGTATCT
CGTGGTGCATTCTGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCC
TGTCAAGAAAGCGTTGTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAA
TCGGACATGCTATCATCGAGAAATCAGGAGGTGGGTTATGGTGTCACAAG
ACATGTAGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTTCGATGCTT
GAAGTGCATTCCTGAAAGGTATTATCATAAGAAGTGTCTTATCAAGACAA
GAGAAAGACTTGCTAAAGCCAGAGAAAGACTCGTTACCGCACAGGAGATG
CAATCATTAAAGGAAGGGGAAGTTTTGTTGCGGAAACGCATAGACTTGAA
GGTGAAGGTGTGTCATGGGTGCAACGGATCCATTGCTAGTGGGTGGTCCA
CCGCACGATATTTGCATCGCACGTAAAATTTATTTGGTGATACTTCGGTT
TATTGtgataaatcaaatttttttcgttttcttctaAGCGAAGACGCAGT
ATCAACAGCAAATATTCGAAATATCAACGTACAACAAATGATCAAAGATT
TTGGAGTTTGCACTGATGTACCTAGATGTTTTGATTACCCTGATTTTTGT
TTCACCAACTCAACGCCAAATGAAATGCTTAAAAAGATTTGGAATACTGA
CGAAGCAGCCGTTGGGATCATCATCTGTTGTATTGACAGGTTTTACATAA
CAGATGGGGACTTGAAAACGTTAAAATCTGGAAAGCAATTGAATGACCAA
GTTATTGATGCATATATTTGCCAATTGACAAAGAACTTGCCAGTTGAAGA
CGGAATTCAACACATTCAGTCCCACAAACTTACAAAACTTTTCAATAAAG
GCACGATCACATTCGGTGTGAAAGAAAAGAAAAGCTTACAAAGTTCCAAG
ATGATAGTGGGTGCATTTAATATCAATAGTCATTGGATGTTTTTGGTGAT
TTACCCGGCTTTAAAAGAAGTCAAACTGTACAATTCGTTGGGTTTGGGAC
ATTCCGCTGGTGTTGAAACGGATATTCTACAAAAATGGAGGGTTGCTTGC
AAAATACTTGACTTGGACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGC
TATGCAAGAAGACACAGTATCTCGTGGTGCATTCTGCCTTAGCTTTGCAG
AAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAAGCGTTGTCGAAGAGAAAT
GTGGCAGACTTTAGATTAAAAATCGGACATGCTATCATCGAGAAATCAGG
AGGTGGGTTATGGTGTCACAAGACATGTAGGATATGCAGAGCAGACAAGC
AAGAAAACTTGGTTCGATGCTTGAAGTGCATTCCTGAAAGGTATTATCAT
AAGAAGTGTCTTATCAAGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAG
ACTCGTTACCGCACAGGAGATGCAATCATTAAAGGAAGGGGAAGTTTTGT
TGCGGAAACGCATAGACTTGAAGGTGAAGGTGTGTCATGGGTGCAACGGA
TCCATTGCTAGTGGGTGGTCCACCGCACGATATTTGCATCGCACGTAAAA
TTTATTTGGTGATACTTCGGTTTATTGtgataaatcaaatttttttcgtt
ttcttctaAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATATCAAC
GTACAACAAATGATCAAAGATTTTGGAGTTTGCACTGATGTACCTAGATG
TTTTGATTACCCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAATGC
TTAAAAAGATTTGGAATACTGACGAAGCAGCCGTTGGGATCATCATCTGT
TGTATTGACAGGTTTTACATAACAGATGGGGACTTGAAAACGTTAAAATC
TGGAAAGCAATTGAATGACCAAGTTATTGATGCATATATTTGCCAATTGA
CAAAGAACTTGCCAGTTGAAGACGGAATTCAACACATTCAGTCCCACAAA
CTTACAAAACTTTTCAATAAAGGCACGATCACATTCGGTGTGAAAGAAAA
GAAAAGCTTACAAAGTTCCAAGATGATAGTGGGTGCATTTAATATCAATA
GTCATTGGATGTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTCAAACTG
TACAATTCGTTGGGTTTGGGACATTCCGCTGGTGTTGAAACGGATATTCT
ACAAAAATGGAGGGTTGCTTGCAAAATACTTGACTTGGACGGGAGCTGGA
AGATTTCTTCTCAAATCAGTGCTATGCAAGAAGACACAGTATCTCGTGGT
GCATTCTGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAA
GAAAGCGTTGTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGGAC
ATGCTATCATCGAGAAATCAGGAGGTGGGTTATGGTGTCACAAGACATGT
AGGATATGCAGAGCAGACAAGCAAGAAAACTTGGTTCGATGCTTGAAGTG
CATTCCTGAAAGGTATTATCATAAGAAGTGTCTTATCAAGACAAGAGAAA
GACTTGCTAAAGCCAGAGAAAGACTCGTTACCGCACAGGAGATGCAATCA
TTAAAGGAAGGGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTGAA
GGTGTGTCATGGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGCAC
GATATTTGCATCGCACGTAAAATTTATTTGGTGATACTTCGGTTTATTGt
gataaatcaaatttttttcgttttcttctaAGCGAAGACGCAGTATCAAC
AGCAAATATTCGAAATATCAACGTACAACAAATGATCAAAGATTTTGGAG
TTTGCACTGATGTACCTAGATGTTTTGATTACCCTGATTTTTGTTTCACC
AACTCAACGCCAAATGAAATGCTTAAAAAGATTTGGAATACTGACGAAGC
AGCCGTTGGGATCATCATCTGTTGTATTGACAGGTTTTACATAACAGATG
GGGACTTGAAAACGTTAAAATCTGGAAAGCAATTGAATGACCAAGTTATT
GATGCATATATTTGCCAATTGACAAAGAACTTGCCAGTTGAAGACGGAAT
TCAACACATTCAGTCCCACAAACTTACAAAACTTTTCAATAAAGGCACGA
TCACATTCGGTGTGAAAGAAAAGAAAAGCTTACAAAGTTCCAAGATGATA
GTGGGTGCATTTAATATCAATAGTCATTGGATGTTTTTGGTGATTTACCC
GGCTTTAAAAGAAGTCAAACTGTACAATTCGTTGGGTTTGGGACATTCCG
CTGGTGTTGAAACGGATATTCTACAAAAATGGAGGGTTGCTTGCAAAATA
CTTGACTTGGACGGGAGCTGGAAGATTTCTTCTCAAATCAGTGCTATGCA
AGAAGACACAGTATCTCGTGGTGCATTCTGCCTTAGCTTTGCAGAAAGTG
TTGTCCTTGGGGAGCCTGTCAAGAAAGCGTTGTCGAAGAGAAATGTGGCA
GACTTTAGATTAAAAATCGGACATGCTATCATCGAGAAATCAGGAGGTGG
GTTATGGTGTCACAAGACATGTAGGATATGCAGAGCAGACAAGCAAGAAA
ACTTGGTTCGATGCTTGAAGTGCATTCCTGAAAGGTATTATCATAAGAAG
TGTCTTATCAAGACAAGAGAAAGACTTGCTAAAGCCAGAGAAAGACTCGT
TACCGCACAGGAGATGCAATCATTAAAGGAAGGGGAAGTTTTGTTGCGGA
AACGCATAGACTTGAAGGTGAAGGTGTGTCATGGGTGCAACGGATCCATT
GCTAGTGGGTGGTCCACCGCACGATATTTGCATCGCACGTAAAATTTATT
TGGTGATACTTCGGTTTATTGtgataaatcaaatttttttcgttttcttc
taAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATATCAACGTACAA
CAAATGATCAAAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTGA
TTACCCTGATTTTTGTTTCACCAACTCAACGCCAAATGAAATGCTTAAAA
AGATTTGGAATACTGACGAAGCAGCCGTTGGGATCATCATCTGTTGTATT
GACAGGTTTTACATAACAGATGGGGACTTGAAAACGTTAAAATCTGGAAA
GCAATTGAATGACCAAGTTATTGATGCATATATTTGCCAATTGACAAAGA
ACTTGCCAGTTGAAGACGGAATTCAACACATTCAGTCCCACAAACTTACA
AAACTTTTCAATAAAGGCACGATCACATTCGGTGTGAAAGAAAAGAAAAG
CTTACAAAGTTCCAAGATGATAGTGGGTGCATTTAATATCAATAGTCATT
GGATGTTTTTGGTGATTTACCCGGCTTTAAAAGAAGTCAAACTGTACAAT
TCGTTGGGTTTGGGACATTCCGCTGGTGTTGAAACGGATATTCTACAAAA
ATGGAGGGTTGCTTGCAAAATACTTGACTTGGACGGGAGCTGGAAGATTT
CTTCTCAAATCAGTGCTATGCAAGAAGACACAGTATCTCGTGGTGCATTC
TGCCTTAGCTTTGCAGAAAGTGTTGTCCTTGGGGAGCCTGTCAAGAAAGC
GTTGTCGAAGAGAAATGTGGCAGACTTTAGATTAAAAATCGGACATGCTA
TCATCGAGAAATCAGGAGGTGGGTTATGGTGTCACAAGACATGTAGGATA
TGCAGAGCAGACAAGCAAGAAAACTTGGTTCGATGCTTGAAGTGCATTCC
TGAAAGGTATTATCATAAGAAGTGTCTTATCAAGACAAGAGAAAGACTTG
CTAAAGCCAGAGAAAGACTCGTTACCGCACAGGAGATGCAATCATTAAAG
GAAGGGGAAGTTTTGTTGCGGAAACGCATAGACTTGAAGGTGAAGGTGTG
TCATGGGTGCAACGGATCCATTGCTAGTGGGTGGTCCACCGCACGATATT
TGCATCGCACGTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_024186	XLOC_024186	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00039936-protein	TCONS_00039936-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0002248	supercontig	sc0002248:145..4467 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.30074	6.20364	2.02695	6.53172	2.74969	1.26088	3.03632	2.43217	2.60061	0.800813	0.137254	0	0	0.196388	0	0	0	0.361106	0	0.43474	2.06797	5.42189	0	0.143405	0.992241	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00039936 vs. Swiss-Prot (Human)

BLAST of TCONS_00039936 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00039936 (transcript) - C. hemisphaerica