XLOC_024018 (gene) - C. hemisphaerica

Overview
NameXLOC_024018
Unique NameXLOC_024018
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002178:17329..22338+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024018 ID=XLOC_024018|Name=XLOC_024018|organism=Clytia hemisphaerica|type=gene|length=5010bp|location=Sequence derived from alignment at sc0002178:17329..22338+ (Clytia hemisphaerica)
ccgaatttttttccaaaattgcaAATCAGTGCTCATTGTAACTTTGAACA CCGTCAAGTCAAGTCGAGCAGGAGCAGTCAATGCAGTGCAGTCCAAAGTG AAGATGGAAGCATTTAAGAAGTTTTCCCTAACTCATTTCCAAAAGCACAA GGGCCATCCTAAAAGCCCCTACGATCCGATAACGATGGAGCCAGCTGAAT TTTCTACTCCAAAGCCATCAATGCAACCATGCAATGCTGAAAGCCCCAAC ACTCCCTCAAGACGAAGCTCAAAgacaacaaaaacaacaccaTGCAATGC TGAAAGCCCTAACACCCCCTCAAGACGGAGCTCAAAGACAACACCAACAC CAGCCAAGAAAAGGAAGCAGTATGACACATCCATGTTTTTGGAGGAGTCG TGTagtgatgatgaagaaaataacAACTCTAGATTGGAGCTCTCATCAAT TAATGATTCTAGGGAAGATAGTCAGCAGAAAGAAGGTATTTGATGTGTAT AGTCAATTCCCTGATACTCTCctaataactttttttcaaatcataataAA AGAGGGGACAATTGCTACTGGGGTGAAATTGTACCTCTGAAACCCTTGAA AAACAGGCTAGATGTATTAAGCTGAAATCAGGaaatttagagcaaaataa aggACTTTCTTCTTTGGCAGCCAAAAAATTGTCATAATTTAACAAGAGGG GGGTCAATCTTTTAAGCCAAATGCtggtaaatatttctttttactttttt actattttttttaacagaaaTTACCACTATGAAGAAGATGTTGAGCAACA TTACCAATAAAATTGCTAAAGTTGAAAAGCAGAATGAATTATTGCAGTCA AANGACCTGTTagattctatgttaaaaacctactctttatacacgttttt cgcgtttttcgtaaaGCATAACGTGATATCATCaacatttccaggctaaa aaactACAGCATTGCATAAACATTAAACCTCAATACCTGGAAAACCGACC AAAAGAATCGACGACGAGAGTTATGCTTGAATTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTAACGATGGAGCCAGCTGAATTTTCTACTCCAAAGC CATCAATGCAACCATGCAATGCTGAAAGCCCCAACACCCCCTCAAGACGA AGCTCAAAgacaacaaaaacaacaccaTGCAATGCTGAAAGCCCTAACAC CCCCTCAAGACGAAGCTCAAAGACAACACCAACACCAGCCAAGAAAAGGA AGCAGTATGACACATCCATGTTTTTGGAGGAGTCGTGTagtgatgatgaa gaaaataacAACTCTAGATTGGAGCTCTCATCAATTAATGATTCTAGGGA AGATAGTCAGCAGAAAGAAGGTATTTGATGTTTATAGTCAATTCCCTGAT ACTCTCctaataactttttttcaaatcataataAAAGAGGGGACAATTGC TACTGGGGTGAAATTGTACCTCTGAAACCCTTGAAAAACAGGCTAGATGT ATTAAGCTGAAATCAGGaaatttagagcaaaataaaggACTTTCTTCTTT GGCAGCCAAAAAATTGTCATAATTTAACAAGAGGGGGTCAATCTTTTAAG CCAAATGctggtaaatatttttttttactttttactattttttttaacag aaaTTACCACTATGAAGAAGATGTTGAGCAACATTACCAATAAAATTGCT AAAGTTGAAAAGCAGAATGAATTATTGCAGTCAAAAGTTTGAGAACTTTC TAACAAGACGTCGAAAAAGAAGCGATTTGTTGCCAGCAATGAAATCAAGG TAaagccatttttcaaaatttgattggtattactgttttaaagttttata cTACCTAGTCATGCTAACAGTAGTATAAATACACAACTTCTTACAAATGT GAGAATCAACTGGCCTCGTACTTGTTCAAAATCAGGTTTCTGGACACGaa cagaaaatattttagatTGATTCTTGTGCGGCAATGGCATTTCTTTTTAA GAGGATTATTTTTGAAAGCATCAACTGTTTTTTTACCAAGATTGGGGAAA CTTTGGGAGTTTTTCCACATAAGTATTTTTTCTACcgtacaaaaattttt ttcattcagacCCTTGTCCGTGATACTCTGAAGGAGGAATCTGGGAAAGA AGGTTTTAAACCTTGGATATTGACAGAAACGAAGTGAGTATAATTTAAAC TAAATTGAAAGGGAATTggtcccggggggggtactagggcaagatgggtt acggggatgctccgctggtcagggtaccttatttaacctccacgagtccc aggtaaggttgcaaaaacaccaaaataaaacaatcagtccctcgtagggt gcctatttttggaaaatttggggaaaaagtagaaaatttgagaaaatttt ggaatttcagtcccattcagggtcactttttTCACAAATTTCGAGTCCCA Catagggtccatttttcgaacctcagcggagcacccccgtcggttgacaa gggtagtacccccccgcaATTGGTTTACCAAATTCTGGCCTTTAAGAAAA GCACCAAATGATTATTTAGGAACAAATTCAATAGGCAGTCCCAATCTCCT ATTTGATTGGCAAGTCTTTCAATAAGAGGTGTGTGTTCGTCAATCTTGTA TGGTGAGCAGAAAGTTATGTGCCTGAATTATTATATTATGATTCTGTAaa aagatttctataaaaaattatGCGCATATTTTGTAAAGATTTCTTGCATT TCATTCATGTTATGTTCATTCACTACATGGATGTTGTGTCACTCTCCTAC TTGTTGAAAAGCCTGATTTGATTACCACTTTGCttataaaagttaaattt tcattttagtcCATTCACTGAAGCAAATAGAGAATTGTCCAAACGAATCT TGGAACTTGTAAAAGGCACAAGCCCTGAAACTTCATCTGAAGAAATCACA AGTAAAGACTTGAATTTATTctatgattttttaaaatagGAGCCTGTGAA AGCATGCTTATAAGAGGGTGGCACTTAATGGAGGAAATATACCGTCAATC GGGGTTACTTTCATAAGCAGGGGGTAACTTTCATCAACTCCAAACAGCAG ATTtttcgaatctcaatcgaacgtcaaaattctgagtaatattcgattgg tttgattgttgTTTGACTGCATTCGATTATCGTTCGATAGCGTTTAACGT AAAGCAAAGAAGAGTCTTTGACGCCCTTTGATGTCCCGTCGGGATCAACT ACCATAAGAGTTAGGGAACTCAACTGTAAGTAAGGCAGAATTCTGTAATC CAAACATccgaacgcaatcaaacatcaatcgaacgcaatcgaacatcaat cgaacgcaatcgaatatcaatcgaatctgaaaattgcggtaatattcgat tgagattcgattgcgtttaacaatcgaatttcaatcgtcgattgcgttcg atttggttcgaccggttcgatcgtcgattccgttcgattgagatcgtctg gtaatTGAATGTAAATAGAATGCAAACAAGTTGTAAATAagttgtttttc tttacttttacaAATTGCAGACCAGAAAAATCTGCTGTTTGAAGTTGATT AAAGTTACCCCTCATTTATGAAAGTAACCCCGATTGACGGTAGTACTGTT TAAACAGGCAACCCTCACACCATACATCCACATTCCAACCTATTAAGTTA TTTTGGGTCTGACTTCAAAGATCTTTCTTTTGATAGCCTATTTTCGAGCT TTTATCCTTGGCTCAACAAAGTTGATTCActttccaaatatatttttttc ttgcatTTTACTTCCGACCAAATCAGTCAGTCTGTATcatgattttaatt ttatttattcaGATGCAATACACATTCGTTTCAAGTCCATTAGAGACACA AATCGGCGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039717TCONS_00039717Clytia hemisphaericatranscript
TCONS_00039718TCONS_00039718Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039717-proteinTCONS_00039717-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002178supercontigsc0002178:17329..22338 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.68 3.62 1.99 1.07 22.17 17.85 4.95 5.31 6.26 5.05 4.9 6.52 2.67 3.68 2.43 2.02 3 1.61 1.49 2.19 2.26 1.77 1.06 1.72 13.75 12.96 2.61 0.99 2.48 2.26