XLOC_023951 (gene) - C. hemisphaerica

Overview
NameXLOC_023951
Unique NameXLOC_023951
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002155:12687..21531+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023951 ID=XLOC_023951|Name=XLOC_023951|organism=Clytia hemisphaerica|type=gene|length=8845bp|location=Sequence derived from alignment at sc0002155:12687..21531+ (Clytia hemisphaerica)
gaaaaaaacacaaaacaaaatgcttGCTATCGAGAACAAAAATCATTTAC
TCAGACGCACACAACAATTTTGATGATGGTGTGattcgaatttttttctg
aGTTTTAAAACTGTtgacaaagatgaaaaattttgtCCTGTTTCTGGCAT
TTGTTTTCAtgacattttcaaataaaggtaagattaattttaaatgaata
tctaaaataatttGATCAAACCATCACTGGTTAGATATCTATATTGTCTC
CCCAATGTTGCTGCATTAGACATCATTCGACCCAATCTCGTACCCAAAGC
CATTTGTAGTTTTTGTCCGACCCAACTTCCatgtaggcttctgctcatcc
tctagcgaaaaaagtttcctataggaagtataggtctgcgaatTAGACTA
ACTTCCATGTAGTGCAACGATCGTTAAGTGTATTTTTTCCCCGATCTCAT
AGCCATGTGTTATTTGTTATGATTGTGCAATTTACCGTGCTTACCGTACA
ACAACCCAATAGTTCCCTTAACAATCAAGAGCGCCAAAATCGCCAAAAAG
TGGCTATCACAGCACTATccgaatttttgcgattttggcgTTTTTCGATT
GTTCAGTGAACTATTGGTTTGTTATACAATAGGTAAGTACATTTTAAACA
GTATGAACTGAACAAAACAGGGAATCAAAAGGGTTTAATGTTTTGGTAGT
GCTTTAAACCCACCACAAATAAATTACCGTGTTACTTCAATTGAACATCT
CCTTCCTTTAAACGCCTCGTAAAACGCCCCTCCTTTAGGGAAAATCTTCA
ATGGATGCTTATGCGAAGGAATACGGTAATTCAAGGTTAATGAATTTCTC
CTCCATAGTTGATGGTTTACGTTGCCAACAATGTTTCAGTCAGAAATCAA
TGACCACCTGTTCAAGTCAACAATATGAAGCACATTGTGATGTCTCTGAA
ATGTGTTTTCAGCTTAAAGTAGTCAGTAGCATGGTAGCAGATATCATCAG
tcataaagaggaaaaatatctaaaaatatttctacTCGCTTTGCTCACAT
AATtgttccaaaaatattttcctttaaaggggacaccaaaaaaaaaaaaa
tttgggaaaattggCTCATCAGTTTGCGCCAATTTCGATCAAACCACTAC
GCTACCAACACGTAGAAATGAACAAATATGTCCAAAAATTGTCCCCCTAT
TAATTATAGCTTATGAAAAGTAAAGTCATTTCCAACCGAAATTCCGTTgt
tgtttaaaaaaacttagaCGTAGAGCTCTTGAAAACTGcgggaaaaacct
ttttttctgaAACTCTTTTTAAACCCACCATCAAGGTTTGACGTCTCAAA
TTTTTAGAAGAATTATGCAAAAAGAAATTGCTGATTCGACAAAAAATCAG
GCgccgcaaaatttaagtttaaattGTTATCTTCCGTTAAATTATTACAT
TTCATATAACATTCTATCATAATTTTTAGGCTTCATGGAAACTTTTTAAC
GCCTGGCAATTTCATATGAAAGGTTGTACACCGAAGACTCAGTGCAACAG
TGACAAATTATGTGGTTCAGCAGAGAGAGATTGTTTGGTAAGATATTCAC
ATTCTTGATTGTAAGAGTTGAATAGAGTGACCTCTGAAGAGAAGATAATC
TTATTTTGTTTCACAGACTTGAACAATCTCATTCGTGGTCATAATTAGCT
GATTTCTAAGAGCCATCTAACTCCAGTCTGTTTCAAACTGTCTAATCAAC
ATATACCCCCGGTATAACCACAAGtctataaagcccgaagagATAGATAA
agtatttttgctgaaaaatgagCCTCAGTGGGAATGAGATAAagtatttt
tgctgaaaaatgagCCTCAGTGGGAATGACAACTTTATCAAAATACCGAT
GGGGATCAATTGTTTCAAGAGTGGATgcaatattttttctatttaattTC
CGATGGGAATAAAGCAATAGAACACTTCCCAGTAGGGTTAATTTAATCCA
CCAGGAAAGATTATTTGGTCATTTTTTTCAGTGGGGTGGGGGCTCCAACG
GGTATGTGACACGGGGATGTAGACAACGTAATTTTTAGTTGCGAAGACTG
CTGCGAAAGATGATCCAATCAGTATTTAATAGAGATCTGTGCatataaca
attttatttttttctttctagtaCAAATGCTGTGAAACAGAAAGCTGCAA
TGGCTCGATGTGACgataaaatgaatttatttttgatttatttttgattt
atgatttatttatgatttatttttaatttatttttcatttatctctacag
tatgtggcccccaaaacgtcgatcaaatttgaaatttctctcaaatctag
aaggaaaagaggttttacaatttttttgctgcatgaaaagctttaacatc
tctactttatttcctggaaggtcattttcaaaattttcaatttcagcaAT
ATTTTTAAATCACTCAAAGATAGggagcttttttctaatggcccccaaaa
cggagggttgcaattttagcgatttctcgagatatctttaagatatgaat
acaaaattttgaccatagtttttaaatgcgatttagagggttttgggcat
aaatttgtttggtaaaatttttacagtggttgtcaaaacggaggtttgca
attttagcgatttctcgagatatctttaagatatgaatacaaaattttga
ccatagtttttaaatgcgatttagagggttttgggcataaatttgtttgg
taaaatttttacagtggttgtcaaaacggaggtttggggcccccaaaacg
taggtgtagttaaaatcaaattattaagcccagtggtaatagggggagaa
actatgaacatatttgtgttttcccttaaatttacgacccgatggatgta
aaatttatgatttttataaaatatttcaagattgtcgacgatgcaaagtc
caaaatgaaaattaagacattttcaaaatgacaattttgatttacaacgt
cttaatcaagtttctgaaaaccaatctcttttgaaaatagttccattcat
gtatggaatatgctgtggaaattttagaaaaacagcttaactgaaactga
aaatattaaactttaaaggtatttttctcctatattttgttaaaaaatga
gagaatttgccgtttttgctgattcagcgaagaattttatatataatgtt
aattttttgttataaactattaactcaagctgataggaatggaattccaa
gattttttgctgtttctcatgtttagaattttcggttttatcaatgctga
ttctaaggccccaaaatactggttgacctttaagatgctatatcttttat
ccattctctaaagtcacagatgtatctgcattttttGAAGGGCATTAGGt
ttagaaagtttcctatacctcattttcataatttattttcaatatccaag
gagctaaagtgagttatatgcaatttttatctaattttggtgttaaaata
tttccttcagacgcaagTATGTTANNNNNNNNNNNNNNNNNNNNNNNNNN
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ataaatcttcaagtcagaatcctcattttaatgacgacctccgttttggg
ggccgtctccgttttgggggccgtctccgttttgggggccgtctacattt
tgggggccatatactgtaatttatgaataggagtaattttatggaaaatt
tttttcaaattataacgaactgataatcaaaattattttcaaaaaattaa
aaaaaattgaaaaaattaaaaaaagttgaaaagtaattttttttcgaaag
attttttttttatttttgatttattcatgatttatttctgatttattgtt
gatttattgatttatttctgatttatttttgatttattgatttatttctg
atttatttttgatttctgatttatttctgatttatttttgatttctgatt
tatttctgatttatttttgatttctgatttatttttgatttatttttgat
ttttgatttatttttgatttatttttgatttatagaattatgtacgagat
ttattttagtgatttgcccctccacatttttaacaagtatattgaaatat
aatagccttgtcatgaaaaattgaaaaaaacttcacataataagccctaa
taagcacaatactccaaacttctagggNNNNNNNNNNNNNNNNNNNNNNN
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tcaacccccagccgggtcataccaaagattctcaaaatggtacttgatgc
ctctctgcttgatgctcagcaactaagaggatcaagggtaagtggagaaa
tccagggagaaagagtggcgcccccccctacctttgggtagatagctatc
gaaagaggagccttcgggtcgcctccgactgcggtcgcagacttacttac
tacttacttacttaaactATCTGCACCGTGCAGGTACCGTGAGTGTCACA
ACTTGGTTTTCTTTGAGATACAAAGCATATAGATGGGGAGAAGGAAGAAG
TCATAAGAGGCGTATTTTCGCGCAGTCGAAGATagagcgaaaattagttt
ctccGCGATCTCACACTCAAATAGTAGGGCGTCAGGGCGTGATCGTGAAT
GGGCGGACGGGCGTCCGAGAGACATGGGTTCGAGTACGCATGCTCAGATG
AGACATGTATGGGTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TGTCTCTATCATATTAAAACCCCAATGTTGCTACATAAGACACCATATAG
CCAACTTTTGTGCAATTTGTTATAATTGTGAAATTTATGAACTGAGCAAA
ACAGGTAAAGTTTTGATAGTGATTTTTAAACTCAACACAAACAAATAACC
TGGTACTTCGATTACTTCTTCCTTGAAGCGCCTCGTCGAATAATGCCCCT
CCTTTAGAGAAGATTTTCAAcgggtgtttattcgaagtaatacggtgaAA
TCTCTTCTCCATATAGTTGATGGTTTGCGTTGTCAACAATGTTACAGCCA
GAAATCAATGACCACCTGTTCAAGTCAACAATATGAAGCACATTGTGATG
TCTCTGAAATGTGTTTCCAGGTAAAACTCTTACCAGGGCTTTTGGGGCAG
GTTTTAGacataaagaagaaaaattccaaaaagttTGTACTCACTTTGCT
CACATAGTTTTTCCAAAAGTATTTTCCTTTAAAGGGGACACCAAAATAAC
CAATCTGGGAATTGGCTCCTCATATTGCCCCGATTACGATCAAACCACCA
CGCTACGCTATCAACACGTAGAAACGAAGAAGTATGTCCAAAAAACGTCA
TGCTACTAGTTACAGCTCGAAACTTAAAGTCATATTTCCAACCGAAATTT
CGTGTTGCTTTAGAAAACTTAGACCAAGATCTCTCAGCAAAAACTTCTGA
AATTTTTGGCGTACCATCGAGGTTTCACGAATTACGctgatttgacgaaa
aaaaatagGTAAATCTTAAGGTTTAAGATATAATGCTTTATATGTATTAT
ATTTTAAGGTATATAATATTTTATCCTAATTTTTAGGCTTCATGGAAACT
TTTTAACGCCTGGCAATTCCATATGAAAGGTTGTACACCAAAGACTCAAT
GCAACAGTGACAAACTATGTGGTTCAGCTGAGAGAGATTGTTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039642TCONS_00039642Clytia hemisphaericatranscript
TCONS_00039643TCONS_00039643Clytia hemisphaericatranscript
TCONS_00039644TCONS_00039644Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002155supercontigsc0002155:12687..21531 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.22	0.67	0.48	1.59	0.21	0.76	0	0.99	0.86	1.06	0.67	2.67	1.26	1.63	2.6	17.74	20.42	2.67	1.72	30.16	27.94	3.92	7.77	17.68	13.71	0.86	0.66	0.9	1.83