XLOC_023907 (gene) - C. hemisphaerica

Overview
NameXLOC_023907
Unique NameXLOC_023907
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002144:9403..20575+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023907 ID=XLOC_023907|Name=XLOC_023907|organism=Clytia hemisphaerica|type=gene|length=11173bp|location=Sequence derived from alignment at sc0002144:9403..20575+ (Clytia hemisphaerica)
CCATCATTCGCTTTTTCACTAACTTTCAACGGTCCTACCCGAGATTTCCA GGGGATTATTTGGTATTCAAATTTCGCCAATAAccctttacaattttttt ttggaatagcccagtTTTGACCCAAATTATTAGCTAGCGGTGAAAAAATT ATGCCCGGCCTACTAACTGActaaaaaaggtctattctgttttgcaaaaa agaaaaagaaacttcATAAGCTACATCATTTCAAAGTAATTCAGACAGTC AGAGACTCACTGACCAGCATAGATTTGTGAAATCTTCTACCATCAAATGA CAGCAAAaaacttgacaaagtttagCCATTAGCAGCCGATGAGAAATTTG TGgcaatttttgccattttctcaCCCAGCCGCACACTGTGTAAGCCGTTC TAAAGGTAAGATTTCTGTAAAAGGGTATTAAACCATCATTCTCCTAATTT GTTTGTTATAAAAACAGCAAATTTATACTAAAGACAGAAGAAAGAATAAC ACAAAAGTTATCTGAATGAGATTTCTTTTTTGTAACCTTTTGTCATTATG tgtttattttgagaaaaaaattcaggtTTCGAATTTCGTTCCAACGCACC GGTTGGCTTTCAAGCTCTGTAAACAAGGGGGCTTATGTTTAGCTCAAAAG TCAACTTGAAACAGGTCCCTTCTTCAGCTTGACATTTGATTGGACCACAT GAAGTCGGAGTTTGATAACTCTCTAAGGAGGAGAATTTTGAACTTCGTAC CCATTTCTCTTATAAAAAGTAGCCTGGTGCTCGTTTAAATTAGTGAAAAG GCAGCCTCATGTCTAATATGATTCTCTCGTAGCAGTCCTGTTTTTCTGCT TGTCGAGGTAAGTTATCTACTGTGATACTGTCTACGTCTTATAAAACTTA CCTCTGATTCTAAAATActaggttttgtttttttgacaaTGTACACAAGT GGGATCTGATGTTATCTTCACAAACCCTCAACCAGCATCAGGGTTTTCAA ACAGTGGCAGAATTCCTATGGGCGGATCCTTTTTTAGGAAGCGAAATGTT ACCAGGGAAAAGTCGACAATATTGATAGTCAAGCCAGTTCTCTGAAACAG ATAAAAAACTGAACTCCATGGGCTATTGCAAAAACAATTGTACAtggtat tgacaaacttttttcaccaacctttatgaaaatttcgaagcaaaattATC ACTTGGAAATGACCCTCTGTAAAGTGAAATTTTGGGAGATTTATTGATGC CAGCTTagggtaacctgataacagattgcGTAATTTCTGGCCCAGTAcct gaagctctaaagaccTGAGTAAAATATACAATCTGTAGAATATGGTCGTT GCGCGCCTATACCACAACAAACATCACTATGGCGTTAGGGGTTGGGTTCT TTTACCTTGACTATTGGCAAAATGCTACTTTCAATATTTATTGATCAAGT TGTCAACTCGAAACCAGACATTTGTCATTCTTGGatccaaaaaaattctt tatgtCGGGGTTTAATTTAAGCACCTTTATGTGCAAGAGTTCTTTTTTGA CCAAGATACTTTGATGTCAAGGAATGGGGGTAAGGGTCAACAAATGGGGT GTTTGTTAAATTCCGGAAGGGAAGTCTGCAAAAGAGTCATCCACAAAAGA TTTGGAACTTTTGAGCTGTTCTCGAAAATACACTTTTCCcccaatgggct cttccagaaaaaaaatttacatgtgtgggtggaggatataacaattttta gtgatttaccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCCCCcagacagagcaaatttacaccccggacaaggcaaattttgatg atttctgCTACTACTTgttgaaacttgaaaaaaatataagatCTTGTAAC CAAAACAtcagccaaaatcaaaacaaacaaaaaatcttaatttgaaTCAT TATTTCATGCAACTGAACATAAATTTACACATACAAAGCTTTTAACTCTA AAATTATAACTTCCAGAAACCAAAATAAActccaaaaaagtgaaaatctc tGCTTTGCTtcggcagccatgttgaattcAAAATGTGAACAATCAAGCGA GCCTGTATCAAACTAGCACATACATTTTAAATATCACTatcaataatgaa aatatttgttattAGTTTGTTACAGGCTATAAAAAATCTAAATCGCAACG GGGAGAGTTCCTTGACAAATTCATCAtcataaggcggcaatcacaaatat cttcatttcgcgtcctcgttgggtcgaaaaagtgagtcggtcggtcgtaa aaattttcgggttttcttaaaattggacCCAGTGAATTTCTTCTTCTCGT CCGACCTtaatcatccatttttggagtgtatttttgaaggaaactgccag ccagcagccaaaacgaCCGCGCGTTAcgggtggtttcaaattatgacctt tgaacactgtaatgatgaacaaagtcaaaatgctgcgaatgcgctagaaa tcgctcgcaaaaaatcggcaataataaaatttttgaacgaaggaaacatc atcgacagaaaaagtccggcaaatttaccgactcaattctactcaatttt cgagagttgGTCAAGCGAtgcgaaacaaagatatttgtgattgccgccta agcactcgccagctaaaaaggGTTGTTCGCCAAAATTCGGCGGCATATTC TGGGAAGGAGGATCTACCAAGTATTAAGCAGCCtctataaaaaacttttt ttgctagAGGATGAGTAGGCTACCCAGGAAAATGTGTGCTCTGCTGTTGT GTGTAATATTTCTGGGAGGTAAATAAACGGGTGGAGACAAAACGCAGAAC GGCGGAATGCcggaatgccggaaccggaatagctgttccggccggaatag ctattccgcggaataatgattattttaatattttgtaatatgactatata tttttttccataaaCACCTATAACCAGCAATCGGCTAcctttaatacacc tttcccggggTGTTGTTTGAGATTTCATGTTTGAGTGTTTCCCTTAGATA TAACTAAGATATAATTGGCTGTATATGgagggctgtagaggcctcaaGTG GGACGTTTATACAACTCGTGAACCACTTGGTGctgacgtacaccttcagc caagtctaaaaaaatattctgaGGTGTCCCTATTGAGCTCTGGGCCAAGT CAAGCTAATGAAGGTATGTCATCGCTGAAAAATTTGAGTAAAGCACGGCG AGAAATTGGTCCAGTGGTTTAAAGCGTTGGTTTCACGCACTGGGGATCCC CGGATCGAAGCGGGTCAAAgtcacctttaaaatttttatccaggttNAAA GGTGATTATGGATGATTATGTACATAGATATACCCTCaggggtgataaaa gagaaagattattatcataataaaaaatcatattctgCGGAATAGctatt acaaaaaataaaaaaatcatattccgcggaatagctattccggccggaac agctattccggttccggcattccgCCGTTCTGCGTTTTGTCTCCACCCTA AATAAACAGGTTTTTGCCTGTGAgaggttagggaaagtgggtttttaagt ttttttggcTAAACAtattcagggtggtataataacATAAATAGANTCGT AAATGACCCGTACGGGACCGTGAATGACCCCctcccctagcgccggactg ggtaggtctcacgacttgaaactttctggagacgtcaagcatatcgAAGG GGGGNAaaaaacatactaaaattttagagaattttGTTCAACAACTTTCC TACGGAAACACAGGCAAaatgggtttgtttacctccagagacccaAACGG TAGAGAGTAAGCTAGTATAAAAATTCACAGGGTTTTAGTTATTTAGGACT GAGACTTTTGATCCAAGTTTCTCTTAAGACCTATTGcctatttttttgat ttttttattaaagtATACTTTCCACCTCTAGATCATGGATGACCCTGATG TTGGAGAACCGCCTGGTGATCCAGTTGCAACTGCTAAAGTTGAAGATGTA ATAAAGTATCTTAAAAATGTATCGAGCACTGTTTTTGAAGAAGACAATCA AAGTGTCCCTCTGGGCCAGGTAATAGTCTAAGATTATTTTTAGTCTTGTA TGTACATACCTGTGATGAATTTTATTTATCATCTTTCGGGGCTGAATTTA TGATGATACTTACATCCTGAGGTAATGCGACACTGAACTGCACTGAAAgg ttttttatcaaataagggAATTACACACACTTTTTATGATTCAACCCTAT TCTGCAGGCATTTGAGAATGGTAAAGACTTGATCAGCAAGTTCATCACTG ACACTCAACTCAAGTCTATTCTGGTTTGCCAAACAACAAGTCTTGTTGAG GAAGATGGGGGATCTGCTGATAACCTTAAAATCCAAATTGAGTACAGTAT ACAAAGTGCAGTCAACTACATATCTCAAAAAGATAACACTATTGCCTTCA TCAAACGTGGAATGGTCATTGAGGGTGACAAGAAGACCTACAAGCAAGTT CAAATGATCAACTTGGAAAATGCTGCTCCATTTGACACCCTCCATTCATA TGTCAGCAATGCGGTTTCACCATTCTTTAAAAGTTATGTCAAGAAATCAG GGAAATCTGATAGAGAAGGTGATAAGATGGTACCTTCAGTTGAGAAGAAA ATTGCTGAACTGGAAATGAGTCTTCTTCACCTCCAGCAGAATATTGACAT CCCAGAAATTTCCTTGGTTATCCACCCTCATGTGCAAGCACTTTTAAAGA AAGCTGAGAGTGAAAAGAGAAAAGTTGATTCTGAGGATTTTGCTGACAAA CTTGAGGACAGTACCTTCCTAAATGCACTTCAAAATGGTGTCAATAGATG GATTCGAGAAATTCAGAAGGTAAACCGTAGTTAATGgcacttatttttca aaaggatCTCTAGTGGTGATGATGTTTTAGTATGATGTATTCATTTACAT TATGATTAATTATTATATACGCTAATCTGAGCTAGAATTACaggtttttt aacatttttatggAGCTTAATCTTCACTAtaacatattttgaattttaaa ttttaggtCACTAAATTAGAACGAGATCCTGCCTCTGGTAATGCCCTTCA AGAAATCAGCTTTTGGTTGAACCTTGAGAAAGCCCTCCATAGAATTGAGG AGAAGCAACAAAGTCCTGAAGTCAAACTCACCCTTGATATTTTAAAGCAC TCGAAACGTTTCCATGCCATTGTCAGCTTTACAAATGATACAGGTAAACT AGAAAACCAAACattcaagaattattttataACCTTACACTAAATGAGCT TCACAATTTTTCTGCTAAACCAACAATTTCACAAGCTTTAGATTAACCAA ATCTGAACATTTTGCACCTCTATTTAGGTTTGAAACAGGGTTTGGCTACT GTTGCTGCTTACAATCCACTCATGAAGGATTTTCCATTAGAACAACTTCT TTCTGCCACTGAATTGGATAGAATCAAGGAAGCATTAACTGTTATCTTCA ATCACATAAGGAAGATCAAATTGTCTCAATATCCAATCACAAGATGTTTG AAGCTGATTGAAGCAATTTCAAGAGATTTGATGTCCCAGGTTCTGAAAGT TTTAGGGACAAGAAAATTAATGTTGATGAATtatgatgaatttgaaaagg taATAATTTGAAACATTCATTTTGTATTTAACAATGTTCTCTTTGATGAT CTAACTTATCATCTTTCGGGGCTGATAACTGATGTCAATTTGGAAACTGA GAGAACTTGATTTATATGTAAATTGTTCCCAGTATTTGATAATCATTTGG CTATAGTAACTCCTCTCTTCTCAAAAGGTTATGGTCAGTACCTTCAGTGT GTTTGCTACATGGGATGATGAATATGATAAGACTCAACAAATTCTTCGAG AATTAGCAAAGAAGAAGCGTGATGATAGTTTCAAGACTATGTGGAGGATA AATCCTGCCCATAAAAAGTTGCAGGCAAGAATAGACGTCCTAAAGAAGTA AGTCATTGTTGAACAGTCTAAAACTATGATTATAAATGtttatttccttt ttcaaccaaaacgttaaagggaacgacgcatggtatatttatgaaatgct gatctagcNCTTGAAAATTTTGTaggtataccaccacggtactaaccggc atgatgtcttgtactaactgcttgaccccccctgaCGCATGttatattta tgaaatgctgatctagcattggcacaaacatccatacggaggagtattta ggagtgctggatcataacaaaaaccaaaagtgacNcagggggggggtcaa gcagttagtacaagacatcatgcctactaagtgattctttagaggaaaga ggccacaccaccaccctttgacAGTTAGTATGAAATATACTAAGTGATTT CAAAGGAAATTCACTAAGGACCACCCCTTAAAANGTGAATATAATTTACT ATAAtgttcaacaacaacacaaaaagacttacatgaaattttttgaatga aatcgagtgtttctatttttaaatgaagacattctattgtgaatttattc gaaaacttctttgcaatctttctgcttacattttgtcttcattcaCTTTC GATTACTGTTGAAAACATAATAAAGTTTTAGCTAAACTCTTAAACCGCGT ATAACTGTCGGTTAAGCCTatcagctttcgggctgacatcagcatgtatt tcagagtataccatggaagtGCCACCAAatccgacccctactataagtat agcgctatAGCCTTTAATCATGTTACTGCTTTTGCTCACAGAATTATCAA AGGTTTTTTGCAATGTTTGTAAACTGTTACATTTTCTTTGTACTTATTAT AGATTTCGAAAGCAACATGAACAATTGAGGGCTGTTATTCTCAGAGTTTT GAGACCAACAGACAAGCCTGCTCTGACAGACGGCAGTGTGAAAGGTGATG CTGAAATGATGGACATGGCTGATGCAAATGCTGCCCAAGAGGTTGATATG GCTTATGAAAACTTCAAAGATGTGGATCCTCTTGATATTTCAAAGGAAGG AGTTGATTCATGGGAAAATGCATTCAAGAGGTTTGTATCATTCTCACATG TGTCTGATCAAGAAAAGACATTATCATTTAGATGTCAGAATTAGCAGTTA TTTCGATGATGACAAAGATGACGAGTCTGATTATCAAGTAATTGTAAATG TTTTATTTGCATCTATTTACCTCTTGATGCTATTGAGGCATTTGTCTGAG AAATAACTGCTGATTCTGTTAAGTGATACACAAGGTTTTTTGGTGCAAAG CGATTTGAAACTTGGGGGTACAGCCGCACGGCACTGACCCAAAGctgggt ggtggtgtctaattttGAATCCCGAAAAAGTTAGTACCTGTTAATACATT TGGCATGAGTCAGGTATATCACTTGTTTCAAGCAACGACTTACAAATAAA TAGACTGACAACTTTTATTTTCCAATTGAGTTTTGACTGCCATCTGTGTT GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATGTGA ATTGGTAAGGCGGGATATTATCATTTTTATGTCAGAATAGCAGTTATTTC AATGATGACAAAGATGACGAGTCTGATTATCAAGTAGTTGTAAATGTTTT ATTTGCATCTATTTATCTATTGATGCTATTGAGGCATTTGTCTGAGATTT AACAAACAACTGGTTTTGACAAGGGAACATGGAATATATAGCCATTGAAA TTTGTAGATTTAAACAAGTTTGTTACAAATTTGCTTAAATTTTTTCGTAG GTATGGAGAACGTATTGATCGTGTTGAAACGAGAATCACTGCTCGGCTAA GAGATCAGCTTGGAACTGCGAAGAATGCCAATGAAATGTTCCGAATTTTC TCACGCTTCAACGCCCTGTTTGTCAGACCCCGAATTAGAGGTGCTATCAG AGAGTATCAAAAGCTGTTAATTGGCTTGGTAAAAGAAGACATTGAGTCTC TGCATGATAAGTTCAAGGTGCAATATCCAAAAAGCAAAGCATCAAAAATG AGCAAAGTCAGAGATTTGCCACCTCTTTCTGGATCCATTATCTGGGCCAA AGAGGTAGGAATTCATTTAACACTTGCGTAAAACTGGAACTTCGTCTACC TTTGATCATGTGACCACTTCCTTAAAGTTTTAAATACTTTTGGGGCAGAA ATCCATTAGCGTATTACTGTTGTACTTAACCTGtcttaagaaaaattttc tatttagtCCCTAATAAATATATGCATAGTGCTCTCAACTTTCATGGATC ACCTACAGCTATCAAGATTACGAACTAGTGTACAcattaaaatttgtttt gtgtCTTATTTAGATTGAACGCCAACTGAGAGCATATTTACGTAGAGTTG AAGATGTTCTTGGCAAAGATTGGGAAAGTCACATTGAGGGACAAGGATTG AAAGCTGATGGAGATCAATTCAGACAAAAGCTGAGTACTCAAGAGATCTT TGATGATTGGTCACAACAAGTTCAAAAACGTGCTCTTTTAGTTGTTGGAA GAATCTTTGCCATCTATTCTAAGAAAGCTGGAGCTGAAAAATCTCTATTC AAGATCAGAGTCAACTTTACCAGAGATGTTATTACACTAGCTAAAGAAGT atgtttttgcatatttttattAGACCTTGAAATCTTTGTATTTAAATGAT GATTAGCAAGACGGCAGTTCTGTAACTGATATCTTTGCTGCCTTCCTTCT GACAGTtcacaatttaatttttttttagaggTTCTTCACATCAGGCAGTA TTTAAAATAAAACCGTCTTTTTTCAGGTACGAAACTTGAAGTGGCTTGGA TTCAGAGTACCACTTGCTATTGTCCGACAGGCTAATGATGCAAACCAGTA TTATCCATTTGCTATCTCATTGATTGAAAGCATTAGGACTTATGAAATTA CTAATGATAAGGTATGGTTTGTGTTTATTTTCCAAgctttttggatattt tggtGTTCCTTCAAATTCTAGGTAGGACTTCCCATATTTGAATTTCAGGG GGTCAATTGGATAAGCTGGGGCTTCAATTTAATTGGTAGGACTAGCCAAC TTTGTTACAGAAGCCTCATTTACATACCCTTTTCAACCACACTATGATGC AAAAAGAATAGGGACATCTGATAGTAATGATGGATAAACAAACTTAGTAG ATTAAAGCTGAGTGTGTTGAGTATGTATAATGTTTtggattcctttgtgt tttttctaaaatatgaaaattgtgACAGTTACTTGTGTGCTGATGAAGAA GAATAGGGACATCTGAAATGTGATGTATCCAAATTTAGTAGATAATTTTC TGAACACAATCTGGCTAGAATTTTTTATTCTGTTTGAAAATTATATCTGA AGATAGACCAATTATTGCCTAAAAATATGGGTTTTAGACTGTTTGCTACC CTAAAACCCTGAAGGTTTGGTCAGATAACAACTTTGGATCAATGATGCAT GGATTGAAGAAAGTCTAGGCAGTCGTTCCTTCAAATACACTTTCTTGATG TTACTTTTACTTAAAAGTctgttttgttcaaattttcaggtCTTTGACAA AATGTCAATTTCACCTTTGGTTGCTGGAGTTCGAAGAGATATCCAAACTC TCATCAATGAGGTAAGAGGTGTTACTTTATATTGAACTATATTTAGTCAT ATGATGATTAGCAAGACAGCAGTTTTTAACTGATACCTTTGCTGCCTTCC TTCTGATGCAGATCTTGGAAATCACAACAGTTACCCATCTCATTCGTGCA TTGtgattttataatattttattttatttataggGTATGAGTCTTGACTG GCCATCATACAAGTTAATGCCCTATGTAATGAGGCTATCAGAAGCAATTA CAGGATATCAAGAAAAGGTTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039590TCONS_00039590Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039590-proteinTCONS_00039590-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002144supercontigsc0002144:9403..20575 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.65 16.48 14.82 10.45 66.32 45.8 30.76 47.83 21.49 25.6 27.68 29.13 30.53 39.29 20.56 42.49 20.86 22.41 16.79 28.11 39.63 32.18 11.11 19.07 57.06 53.2 28.37 19.44 19.58 17.98