TCONS_00039590-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039590-protein
Unique NameTCONS_00039590-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length830

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039590-protein ID=TCONS_00039590-protein|Name=TCONS_00039590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=830bp
MDDPDVGEPPGDPVATAKVEDVIKYLKNVSSTVFEEDNQSVPLGQAFENG
KDLISKFITDTQLKSILVCQTTSLVEEDGGSADNLKIQIEYSIQSAVNYI
SQKDNTIAFIKRGMVIEGDKKTYKQVQMINLENAAPFDTLHSYVSNAVSP
FFKSYVKKSGKSDREGDKMVPSVEKKIAELEMSLLHLQQNIDIPEISLVI
HPHVQALLKKAESEKRKVDSEDFADKLEDSTFLNALQNGVNRWIREIQKV
TKLERDPASGNALQEISFWLNLEKALHRIEEKQQSPEVKLTLDILKHSKR
FHAIVSFTNDTGLKQGLATVAAYNPLMKDFPLEQLLSATELDRIKEALTV
IFNHIRKIKLSQYPITRCLKLIEAISRDLMSQVLKVLGTRKLMLMNYDEF
EKVMVSTFSVFATWDDEYDKTQQILRELAKKKRDDSFKTMWRINPAHKKL
QARIDVLKKFRKQHEQLRAVILRVLRPTDKPALTDGSVKGDAEMMDMADA
NAAQEVDMAYENFKDVDPLDISKEGVDSWENAFKRYGERIDRVETRITAR
LRDQLGTAKNANEMFRIFSRFNALFVRPRIRGAIREYQKLLIGLVKEDIE
SLHDKFKVQYPKSKASKMSKVRDLPPLSGSIIWAKEIERQLRAYLRRVED
VLGKDWESHIEGQGLKADGDQFRQKLSTQEIFDDWSQQVQKRALLVVGRI
FAIYSKKAGAEKSLFKIRVNFTRDVITLAKEVRNLKWLGFRVPLAIVRQA
NDANQYYPFAISLIESIRTYEITNDKVFDKMSISPLVAGVRRDIQTLINE
GMSLDWPSYKLMPYVMRLSEAITGYQEKVW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023907XLOC_023907Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039590TCONS_00039590Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013594Dynein_heavy_dom-1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 634..654
IPR013594Dynein heavy chain, domain-1PFAMPF08385DHC_N1coord: 233..814
e-value: 3.7E-121
score: 405.4

Blast
[Close]
BLAST of TCONS_00039590-protein vs. Swiss-Prot (Human)
Match: DYHC1 (Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1 SV=5)

HSP 1 Score: 1028.85 bits (2659), Expect = 0.000e+0
Identity = 510/785 (64.97%), Postives = 629/785 (80.13%), Query Frame = 0 
Query:   54 ISKFITDTQLKSILVCQTTSLVEEDGGSADNLKIQIEYSIQSAVNYISQKDNTIAFIKRGMVIEGDKKTYKQVQMINLENAAPFDTLHSYVSNAVSPFFKSYVKKSGKSDREGDKMVPSVEKKIAELEMSLLHLQQNIDIPEISLVIHPHVQALLKKAESEKRKVDSEDFADKLEDSTFLNALQNGVNRWIREIQKVTKLERDPASGNALQEISFWLNLEKALHRIEEKQQSPEVKLTLDILKHSKRFHAIVSFTNDTGLKQGLATVAAYNPLMKDFPLEQLLSATELDRIKEALTVIFNHIRKIKLSQYPITRCLKLIEAISRDLMSQVLKVLGTRKLMLMNYDEFEKVMVSTFSVFATWDDEYDKTQQILRELAKKKRDDSFKTMWRINPAHKKLQARIDVLKKFRKQHEQLRAVILRVLRP--TDKPALTDGSVKGDAEM------MDMADANAAQEVDMAYENFKDVDPLDISKEGVDSWENAFKRYGERIDRVETRITARLRDQLGTAKNANEMFRIFSRFNALFVRPRIRGAIREYQKLLIGLVKEDIESLHDKFKVQYPKSKASKMSKVRDLPPLSGSIIWAKEIERQLRAYLRRVEDVLGKDWESHIEGQGLKADGDQFRQKLSTQEIFDDWSQQVQKRALLVVGRIFAIYSKKA-GAEKSLFKIRVNFTRDVITLAKEVRNLKWLGFRVPLAIVRQANDANQYYPFAISLIESIRTYEITNDKVFDKMSISPLVAGVRRDIQTLINEGMSLDWPSYKLMPYVMRLSEAITGYQEKV 829
            + KF++D Q+ ++LV ++T L E+ G   +  K  I Y+I   ++Y   K N++AFIKR  VI+ DK    Q++++ L   +P++TLHS++SNAV+PFFKSY+++SGK+DR+GDKM PSVEKKIAELEM LLHLQQNI+IPEISL IHP +  + K+      K    DF DK+ED TFLN LQ+GVNRWIREIQKVTKL+RDPASG ALQEISFWLNLE+AL+RI+EK++SPEV LTLDILKH KRFHA VSF  DTGLKQ L TV  YNPLMKDFPL  LLSATELD+I++AL  IF H+RKI+ ++YPI R L+L+EAISRDL SQ+LKVLGTRKLM + Y+EFEKVMV+ F VF TWDDEY+K Q +LR++ K+KR+++ K +WRINPAH+KLQAR+D ++KFR+QHEQLRAVI+RVLRP  T       G V    +M       D ADANA +EV++AYEN K+VD LD+SKEG ++WE A KRY ERIDRVETRITARLRDQLGTAKNANEMFRIFSRFNALFVRP IRGAIREYQ  LI  VK+DIESLHDKFKVQYP+S+A KMS VRDLPP+SGSIIWAK+I+RQL AY++RVEDVLGK WE+H+EGQ LK DGD FR KL+TQEIFDDW+++VQ+R L V GRIF I S +  G   ++ K++VNF  ++ITL+KEVRNLKWLGFRVPLAIV +A+ ANQ YPFAISLIES+RTYE T +KV ++ +IS LVAG+++++Q LI EG++L W SYKL PYV RL+E +  +QEKV
Sbjct:   65 MRKFLSDPQVHTVLVERST-LKEDVGDEGEEEKEFISYNINIDIHY-GVKSNSLAFIKRTPVIDADKPVSSQLRVLTLSEDSPYETLHSFISNAVAPFFKSYIRESGKADRDGDKMAPSVEKKIAELEMGLLHLQQNIEIPEISLPIHPMITNVAKQCYERGEKPKVTDFGDKVEDPTFLNQLQSGVNRWIREIQKVTKLDRDPASGTALQEISFWLNLERALYRIQEKRESPEVLLTLDILKHGKRFHATVSFDTDTGLKQALETVNDYNPLMKDFPLNDLLSATELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKVLGTRKLMHVAYEEFEKVMVACFEVFQTWDDEYEKLQVLLRDIVKRKREENLKMVWRINPAHRKLQARLDQMRKFRRQHEQLRAVIVRVLRPQVTAVAQQNQGEVPEPQDMKVAEVLFDAADANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAAMKRYDERIDRVETRITARLRDQLGTAKNANEMFRIFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQSQACKMSHVRDLPPVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEGQKLKQDGDSFRMKLNTQEIFDDWARKVQQRNLGVSGRIFTIESTRVRGRTGNVLKLKVNFLPEIITLSKEVRNLKWLGFRVPLAIVNKAHQANQLYPFAISLIESVRTYERTCEKVEERNTISLLVAGLKKEVQALIAEGIALVWESYKLDPYVQRLAETVFNFQEKV 847
The following BLAST results are available for this feature:
BLAST of TCONS_00039590-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYHC10.000e+064.97Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens... [more]
back to top