XLOC_023781 (gene) - C. hemisphaerica

Overview
NameXLOC_023781
Unique NameXLOC_023781
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002100:24248..28658+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023781 ID=XLOC_023781|Name=XLOC_023781|organism=Clytia hemisphaerica|type=gene|length=4411bp|location=Sequence derived from alignment at sc0002100:24248..28658+ (Clytia hemisphaerica)
ctttttctcATTAGCTTTAGAAGCCAGTGTAATACGAGACAAGTTAAGCG ATTTGATGATATGTATAGGTGTTAAAATTGACAAcgacaaaaaatcaaag aatgaaaTTACAAAACATTCTTGCGGTGTTGCTTATTCTCGAATTCGTTG CTTGTGTAGCAGGTGGACAAAACGTGACAGCgacaaaaacaaagaagaag aaaaataaaaaggttaaagCAACTGAAAAACCTGATAACAGCATCAAAAC CAATAATACAACAAGATCCGCCAAAACTTCAGTAATAAAAGATCTTTATG AAAAACGAAGTGAATCATTTTGTCATATAACTGAAGATCTAATTAATGCA ACGCGAGCATCTACAACATGTGAACAGATTGTACAAATAGGGAACCACAC TCGTTATTGTAAACAAATTACAGTGGGTTATGCACCAATAGTACCATTGA TCTATCAGAATGAAACTGGTCACGTTGTCGGAGTACTTCCaggtttgtaa aattgtttttgtttgaatacacgattttatgcttgagacgtatgtactaa atgttaaatataGTGTgaattaaagtctgttcacgataagtgtgcactct tttttcttttcgctataacttttgaaggaattcttcgttctttataaaga gtgcacacttatcgtgaatagactttaggatcctaacctaagaatgctgt aagaatattttaggatgattttcccaaaaaagttaagaatatccatgatg aaattgatttacaccattcttacaaCATTTGTTGAGAATCTTTTAAGagc ttttttgggaaaatcatcctaaaatattcttacagcattcttaggttagg atcctaattcagactagatttaacatttagcacatacgtctcaagcataa aatggcatttttgtggaaGGAGTAAgtcttacttgggggtaattgacaat ttataattgaaaatgctctaaaaatggcattcttagcttgagtagcaaaa ttacacgatggtgatattcttagcatagtcttaattttttggctgttttc atcatggacattcttataaagtgtattcttattaaaaaagcgtgtaggtc TTTCAATCTCTTTAGAGAGAAACAAATTCCATTTTTTGGGACACTAAAAG GGTTcaatcccgaagggctagaggcgaaactttaacccttctcaggcaag agaaattgaagccacttatttcccatccaaaacgcgcatagaacgcgccg taatcatgacgacgaattgtatctagcggttcctttgttttggaggacta cactttttgaaatctggcgatagattttagtttcaatccggcgtttgtgt aaaaactacgcgtgGGCGTTCTGGACGGGAAATAAGTTGTTTcgtttccc atccaggagtctcgcctctagcttttcgggcttgaaactcaatggggttT TTCTCTTTAGCTCTTGTCTGAGAATCTAAAACATGTAAAGAGCTTTAGCC AGTATTTATTCATTGGAGTTGAAGAAAATATCTTCGTGATACCAATTGAA AAAGTAATTACGATCGTGTAATAAGTGTCCCTGCTGAGGCtgatttaaaa tatatttgatgtTAGTTTGATTGTTCCTCAATGTATATCCTAGTAGGTGT AAAAAATTCACTGGAAATTTATTAACAGAGGGGTGTCAATCAGAATCAAG AGTAATTGAATATCAAGTCGACTGAGAATTCTTGCGAAAGTAATTTTATA CTCTTAAGTAATATTCTCACTAACTTTCAATTTAGATAAAATGGCCTCCA GCAATCCATCCTTAGGTCTCCCAACTGTAAACTTTGAATTAGATTTCTCC CTCATAGatgaattttttgaatattgaatgCCTTTTTTTAAAATGCTGTC CAGTCCAGTGTCATCTACCCCCCAGCACAAAAATTTCCACCTAATATGAG ACAGGGTTGTATATCAACTCTCGCTTAGTGACCTGGCAAAAAATTAAGAC GGTAGTAACGAAATCCTAGGTAGCTACATTTCATTTGCGGGGGGAATATT ATGCTTTGAATGGAAATGATGGGATAATAACGTCTTTACTCGTCAATACG AGATCTAGGCTATCGTGgtgaaataaaaattgatttctCATAGACGGTTT TAGActatgtcgaacttatcagaggaagagattCGTAATTGcgatttcat tgtcttttaacgagcgttgcactccttcgcatgtttctgACGTAATTgtt ctattgtcttaaatccaccAGTGTTTCTGACCAAGTAGCTAAAAGTAGGA ATCGAAGGCAAGAACGAATTACACTTTTAAACAAGTACGATGAAAGGGGG CATTAAAGAGACGGTTTTTTTGTTCACAGAACACAGAGGAGCGCCACGAC CACTGCACCATCTGAAAGTACCCAAAGAGGTAGTTTAATCTCAATTTATG GTTGGCGTTTTTCGGAATGGCCCGAATGGAATGGTAGGGTTAAGGCTTCT CAGCGTCTCTTTTTTTCTATCATAAGGCTATAAACAATACGTAAATCAAA AGACGAATTATTCTGTTTTAGACTTGCTGAACGAAGTATTCATCCGAAGA TGTTGTTTAGGTTGTGGCAAGATAGTCTACGAAAACCGATTCACTCAAGA GAACAACCTTATGCAACAAGATGTCAATAGAAAGATGATTTTAGTTCCTC ATGAGATGCAACAAGACAAAGTGGTGAAGTTACACAAACACAATGTTGTG CGAatgataaaatatcaaaatatattcTTTCTTGGCAAGAAAATACAAGC TGATGCAGGGGACCTTGTTGGTACACTTTTTGTTAGTACAATCAAAACTT GGCCTTTGTTTGTGATTGCAATTTCAATGGCTATATGCGCTGGTACCATT ATGTGGCTGATGGTGAGAAAAttacttttatttcaataaaaccAGGCTTG TCTTTGGTTTTAACCTTTGATAAGTTCGATTGTTAAGTTTTTTCTCATAT GTTATCAAAGAGTTACAAGACCTGaaggaaatcggatttttttctCTACA GGATCGTTGGATAAACGAGGAGCACTTTCCAAAGACTTTTCCAAGAGGGC CATTTGAAGGATTTTGGTGGGCGTATGTTTCCATGACTACTGTCGGGTAA GTTGGTTCTTATACCTGGTTGCACGCACCAATGAGTGCTGAAAAGTATAT CTTGACATTGCAGTGCATTGCAAAACACCCCAGTTTTTCAAGTTATGGTC GCAATagaaaaaatttggtaaaaatttaccactactggcaaaaaccgggg tgttTCCGTAAAAAATATTACGTAATGAATATTTTGAATCAGGACTCAAA AATGTGAAGTAAAGGGATTTGGGAATCCACACCCAGGATAATAAAATCGA ATTTCTGCTGATTTACTATATAGTTTTGGCGAGAAGGCTACATTGATTTT CCTTTATTACTTCTAGATACGGTGATCGGACACCATCGACAATTTTCGGA CGTTTATTCGCTGTGGTATGGATCATGATTGGGATTACCATTTTCAACAT GTTTACAGCGACCATCACTACTGTACTGAATAGTGAACTCACCTATCAAG CCTCGTTCTCGCCTTATAATATGGAGGTATATATGATTTCGCCTTAAGAA GAAAAGCGTATTTGAGAGTTTACCAGACCAGATATCTGACAAACTAAACT ACTTTAAGTGGGTTTAAAATTTCGTGTAGATCAATTTTGCGAATTTCACG AATTTTGGCtgttttcgcgaaatttaatccacttatGGCATTCATTCTCT TTTGCATTGAGTAACTTTAGGAAGATCTCACCAATGTTTTTCATTATATA ACAAGTGAACTTTACACGTTCAGATTGGCGTAGTGAACAAATTGCAAGTC GTTGTGTCAAGTGTTGTCTCAGAGAGTGCTACACCTAAAGGTATGTCGCA attgaccttttcataaattgcgtcacaagcaacgcttacctcgttttcaa aagtAGATTTTGTAATTAATCCCCAGATGAGTTCATAAGAAGTTTACTCT ATTTATGAAAGTAACACTTGAGAACTCAAGGAacttaatcaccttggtaa tggtttcaaaacgaggcagaggttgcactcaaaataatttatggaAAGTT CTATTGAatgtaaaacatgaaaaagaggTCTATTCACAATCACAAATtgg tactttaatgggataaattttcgcgggcaTTAAATTTAGTGGTTGTCATT AAACGTTTTAAAAGTACTTATTTGACATTTGGcgagttttttttcaaaaa tatttcgaagATAAGGCCAAATATATCTATCTCACAACGTTTGATATCTC GTTATAGGTTATGAAGATGTGTACAAACTTATAGAAGCTTTGAGAAAAGA TGAAGTTAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039419TCONS_00039419Clytia hemisphaericatranscript
TCONS_00039420TCONS_00039420Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039419-proteinTCONS_00039419-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002100supercontigsc0002100:24248..28658 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15 0.81 1.16 0.57 0.69 0.41 0.27 0.62 0.24 0.37 0.29 0.77 1.58 1.68 0.77 1.06 2.64 2.94 7.32 15.2 6.39 6.99 2.65 5.22 4.75 5.34 0.58 0.75 0.5 0.44