TCONS_00039419 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039419
Unique NameTCONS_00039419
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1209

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039419 ID=TCONS_00039419|Name=TCONS_00039419|organism=Clytia hemisphaerica|type=transcript|length=1209bp
ctttttctcATTAGCTTTAGAAGCCAGTGTAATACGAGACAAGTTAAGCG
ATTTGATGATATGTATAGGTGTTAAAATTGACAAcgacaaaaaatcaaag
aatgaaaTTACAAAACATTCTTGCGGTGTTGCTTATTCTCGAATTCGTTG
CTTGTGTAGCAGGTGGACAAAACGTGACAGCgacaaaaacaaagaagaag
aaaaataaaaaggttaaagCAACTGAAAAACCTGATAACAGCATCAAAAC
CAATAATACAACAAGATCCGCCAAAACTTCAGTAATAAAAGATCTTTATG
AAAAACGAAGTGAATCATTTTGTCATATAACTGAAGATCTAATTAATGCA
ACGCGAGCATCTACAACATGTGAACAGATTGTACAAATAGGGAACCACAC
TCGTTATTGTAAACAAATTACAGTGGGTTATGCACCAATAGTACCATTGA
TCTATCAGAATGAAACTGGTCACGTTGTCGGAGTACTTCCagACTTGCTG
AACGAAGTATTCATCCGAAGATGTTGTTTAGGTTGTGGCAAGATAGTCTA
CGAAAACCGATTCACTCAAGAGAACAACCTTATGCAACAAGATGTCAATA
GAAAGATGATTTTAGTTCCTCATGAGATGCAACAAGACAAAGTGGTGAAG
TTACACAAACACAATGTTGTGCGAatgataaaatatcaaaatatattcTT
TCTTGGCAAGAAAATACAAGCTGATGCAGGGGACCTTGTTGGTACACTTT
TTGTTAGTACAATCAAAACTTGGCCTTTGTTTGTGATTGCAATTTCAATG
GCTATATGCGCTGGTACCATTATGTGGCTGATGGATCGTTGGATAAACGA
GGAGCACTTTCCAAAGACTTTTCCAAGAGGGCCATTTGAAGGATTTTGGT
GGGCGTATGTTTCCATGACTACTGTCGGATACGGTGATCGGACACCATCG
ACAATTTTCGGACGTTTATTCGCTGTGGTATGGATCATGATTGGGATTAC
CATTTTCAACATGTTTACAGCGACCATCACTACTGTACTGAATAGTGAAC
TCACCTATCAAGCCTCGTTCTCGCCTTATAATATGGAGATTGGCGTAGTG
AACAAATTGCAAGTCGTTGTGTCAAGTGTTGTCTCAGAGAGTGCTACACC
TAAAGGTTATGAAGATGTGTACAAACTTATAGAAGCTTTGAGAAAAGATG
AAGTTAAAG
Run BLAST on NCBI

protein sequence of TCONS_00039419-protein

>TCONS_00039419-protein ID=TCONS_00039419-protein|Name=TCONS_00039419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MKLQNILAVLLILEFVACVAGGQNVTATKTKKKKNKKVKATEKPDNSIKT
NNTTRSAKTSVIKDLYEKRSESFCHITEDLINATRASTTCEQIVQIGNHT
RYCKQITVGYAPIVPLIYQNETGHVVGVLPDLLNEVFIRRCCLGCGKIVY
ENRFTQENNLMQQDVNRKMILVPHEMQQDKVVKLHKHNVVRMIKYQNIFF
LGKKIQADAGDLVGTLFVSTIKTWPLFVIAISMAICAGTIMWLMDRWINE
EHFPKTFPRGPFEGFWWAYVSMTTVGYGDRTPSTIFGRLFAVVWIMIGIT
IFNMFTATITTVLNSELTYQASFSPYNMEIGVVNKLQVVVSSVVSESATP
KGYEDVYKLIEALRKDEVK
Run BLAST on NCBI

transcript from alignment at sc0002100:24248..28658+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039419 ID=TCONS_00039419|Name=TCONS_00039419|organism=Clytia hemisphaerica|type=transcript|length=4411bp|location=Sequence derived from alignment at sc0002100:24248..28658+ (Clytia hemisphaerica)
ctttttctcATTAGCTTTAGAAGCCAGTGTAATACGAGACAAGTTAAGCG ATTTGATGATATGTATAGGTGTTAAAATTGACAAcgacaaaaaatcaaag aatgaaaTTACAAAACATTCTTGCGGTGTTGCTTATTCTCGAATTCGTTG CTTGTGTAGCAGGTGGACAAAACGTGACAGCgacaaaaacaaagaagaag aaaaataaaaaggttaaagCAACTGAAAAACCTGATAACAGCATCAAAAC CAATAATACAACAAGATCCGCCAAAACTTCAGTAATAAAAGATCTTTATG AAAAACGAAGTGAATCATTTTGTCATATAACTGAAGATCTAATTAATGCA ACGCGAGCATCTACAACATGTGAACAGATTGTACAAATAGGGAACCACAC TCGTTATTGTAAACAAATTACAGTGGGTTATGCACCAATAGTACCATTGA TCTATCAGAATGAAACTGGTCACGTTGTCGGAGTACTTCCaggtttgtaa aattgtttttgtttgaatacacgattttatgcttgagacgtatgtactaa atgttaaatataGTGTgaattaaagtctgttcacgataagtgtgcactct tttttcttttcgctataacttttgaaggaattcttcgttctttataaaga gtgcacacttatcgtgaatagactttaggatcctaacctaagaatgctgt aagaatattttaggatgattttcccaaaaaagttaagaatatccatgatg aaattgatttacaccattcttacaaCATTTGTTGAGAATCTTTTAAGagc ttttttgggaaaatcatcctaaaatattcttacagcattcttaggttagg atcctaattcagactagatttaacatttagcacatacgtctcaagcataa aatggcatttttgtggaaGGAGTAAgtcttacttgggggtaattgacaat ttataattgaaaatgctctaaaaatggcattcttagcttgagtagcaaaa ttacacgatggtgatattcttagcatagtcttaattttttggctgttttc atcatggacattcttataaagtgtattcttattaaaaaagcgtgtaggtc TTTCAATCTCTTTAGAGAGAAACAAATTCCATTTTTTGGGACACTAAAAG GGTTcaatcccgaagggctagaggcgaaactttaacccttctcaggcaag agaaattgaagccacttatttcccatccaaaacgcgcatagaacgcgccg taatcatgacgacgaattgtatctagcggttcctttgttttggaggacta cactttttgaaatctggcgatagattttagtttcaatccggcgtttgtgt aaaaactacgcgtgGGCGTTCTGGACGGGAAATAAGTTGTTTcgtttccc atccaggagtctcgcctctagcttttcgggcttgaaactcaatggggttT TTCTCTTTAGCTCTTGTCTGAGAATCTAAAACATGTAAAGAGCTTTAGCC AGTATTTATTCATTGGAGTTGAAGAAAATATCTTCGTGATACCAATTGAA AAAGTAATTACGATCGTGTAATAAGTGTCCCTGCTGAGGCtgatttaaaa tatatttgatgtTAGTTTGATTGTTCCTCAATGTATATCCTAGTAGGTGT AAAAAATTCACTGGAAATTTATTAACAGAGGGGTGTCAATCAGAATCAAG AGTAATTGAATATCAAGTCGACTGAGAATTCTTGCGAAAGTAATTTTATA CTCTTAAGTAATATTCTCACTAACTTTCAATTTAGATAAAATGGCCTCCA GCAATCCATCCTTAGGTCTCCCAACTGTAAACTTTGAATTAGATTTCTCC CTCATAGatgaattttttgaatattgaatgCCTTTTTTTAAAATGCTGTC CAGTCCAGTGTCATCTACCCCCCAGCACAAAAATTTCCACCTAATATGAG ACAGGGTTGTATATCAACTCTCGCTTAGTGACCTGGCAAAAAATTAAGAC GGTAGTAACGAAATCCTAGGTAGCTACATTTCATTTGCGGGGGGAATATT ATGCTTTGAATGGAAATGATGGGATAATAACGTCTTTACTCGTCAATACG AGATCTAGGCTATCGTGgtgaaataaaaattgatttctCATAGACGGTTT TAGActatgtcgaacttatcagaggaagagattCGTAATTGcgatttcat tgtcttttaacgagcgttgcactccttcgcatgtttctgACGTAATTgtt ctattgtcttaaatccaccAGTGTTTCTGACCAAGTAGCTAAAAGTAGGA ATCGAAGGCAAGAACGAATTACACTTTTAAACAAGTACGATGAAAGGGGG CATTAAAGAGACGGTTTTTTTGTTCACAGAACACAGAGGAGCGCCACGAC CACTGCACCATCTGAAAGTACCCAAAGAGGTAGTTTAATCTCAATTTATG GTTGGCGTTTTTCGGAATGGCCCGAATGGAATGGTAGGGTTAAGGCTTCT CAGCGTCTCTTTTTTTCTATCATAAGGCTATAAACAATACGTAAATCAAA AGACGAATTATTCTGTTTTAGACTTGCTGAACGAAGTATTCATCCGAAGA TGTTGTTTAGGTTGTGGCAAGATAGTCTACGAAAACCGATTCACTCAAGA GAACAACCTTATGCAACAAGATGTCAATAGAAAGATGATTTTAGTTCCTC ATGAGATGCAACAAGACAAAGTGGTGAAGTTACACAAACACAATGTTGTG CGAatgataaaatatcaaaatatattcTTTCTTGGCAAGAAAATACAAGC TGATGCAGGGGACCTTGTTGGTACACTTTTTGTTAGTACAATCAAAACTT GGCCTTTGTTTGTGATTGCAATTTCAATGGCTATATGCGCTGGTACCATT ATGTGGCTGATGGTGAGAAAAttacttttatttcaataaaaccAGGCTTG TCTTTGGTTTTAACCTTTGATAAGTTCGATTGTTAAGTTTTTTCTCATAT GTTATCAAAGAGTTACAAGACCTGaaggaaatcggatttttttctCTACA GGATCGTTGGATAAACGAGGAGCACTTTCCAAAGACTTTTCCAAGAGGGC CATTTGAAGGATTTTGGTGGGCGTATGTTTCCATGACTACTGTCGGGTAA GTTGGTTCTTATACCTGGTTGCACGCACCAATGAGTGCTGAAAAGTATAT CTTGACATTGCAGTGCATTGCAAAACACCCCAGTTTTTCAAGTTATGGTC GCAATagaaaaaatttggtaaaaatttaccactactggcaaaaaccgggg tgttTCCGTAAAAAATATTACGTAATGAATATTTTGAATCAGGACTCAAA AATGTGAAGTAAAGGGATTTGGGAATCCACACCCAGGATAATAAAATCGA ATTTCTGCTGATTTACTATATAGTTTTGGCGAGAAGGCTACATTGATTTT CCTTTATTACTTCTAGATACGGTGATCGGACACCATCGACAATTTTCGGA CGTTTATTCGCTGTGGTATGGATCATGATTGGGATTACCATTTTCAACAT GTTTACAGCGACCATCACTACTGTACTGAATAGTGAACTCACCTATCAAG CCTCGTTCTCGCCTTATAATATGGAGGTATATATGATTTCGCCTTAAGAA GAAAAGCGTATTTGAGAGTTTACCAGACCAGATATCTGACAAACTAAACT ACTTTAAGTGGGTTTAAAATTTCGTGTAGATCAATTTTGCGAATTTCACG AATTTTGGCtgttttcgcgaaatttaatccacttatGGCATTCATTCTCT TTTGCATTGAGTAACTTTAGGAAGATCTCACCAATGTTTTTCATTATATA ACAAGTGAACTTTACACGTTCAGATTGGCGTAGTGAACAAATTGCAAGTC GTTGTGTCAAGTGTTGTCTCAGAGAGTGCTACACCTAAAGGTATGTCGCA attgaccttttcataaattgcgtcacaagcaacgcttacctcgttttcaa aagtAGATTTTGTAATTAATCCCCAGATGAGTTCATAAGAAGTTTACTCT ATTTATGAAAGTAACACTTGAGAACTCAAGGAacttaatcaccttggtaa tggtttcaaaacgaggcagaggttgcactcaaaataatttatggaAAGTT CTATTGAatgtaaaacatgaaaaagaggTCTATTCACAATCACAAATtgg tactttaatgggataaattttcgcgggcaTTAAATTTAGTGGTTGTCATT AAACGTTTTAAAAGTACTTATTTGACATTTGGcgagttttttttcaaaaa tatttcgaagATAAGGCCAAATATATCTATCTCACAACGTTTGATATCTC GTTATAGGTTATGAAGATGTGTACAAACTTATAGAAGCTTTGAGAAAAGA TGAAGTTAAAG

Coding sequence (CDS) from alignment at sc0002100:24248..28658+

>TCONS_00039419 ID=TCONS_00039419|Name=TCONS_00039419|organism=Clytia hemisphaerica|type=CDS|length=6642bp|location=Sequence derived from alignment at sc0002100:24248..28658+ (Clytia hemisphaerica)
atgaaaTTACAAAACATTCTTGCGGTGTTGCTTATTCTCGAATTCGTTGC
TTGTGTAGCAGGTGGACAAAACGTGACAGCgacaaaaacaaagaagaaga
aaaataaaaaggttaaagCAACTGAAAAACCTGATAACAGCATCAAAACC
AATAATACAACAAGATCCGCCAAAACTTCAGTAATAAAAGATCTTTATGA
AAAACGAAGTGAATCATTTTGTCATATAACTGAAGATCTAATTAATGCAA
CGCGAGCATCTACAACATGTGAACAGATTGTACAAATAGGGAACCACACT
CGTTATTGTAAACAAATTACAGTGGGTTATGCACCAATAGTACCATTGAT
CTATCAGAATGAAACTGGTCACGTTGTCGGAGTACTTCCagACTTGCTGA
ACGAAGTATTCATCCGAAGATGTTGTTTAGGTTGTGGCAAGATAGTCTAC
GAAAACCGATTCACTCAAGAGAACAACCTTATGCAACAAGATGTCAATAG
AAAGATGATTTTAGTTCCTCATGAGATGCAACAAGACAAAGTGGTGAAGT
TACACAAACACAATGTTGTGCGAatgataaaatatcaaaatatattcTTT
CTTGGCAAGAAAATACAAGCTGATGCAGGGGACCTTGTTGGTACACTTTT
TGTTAGTACAATCAAAACTTGGCCTTTGTTTGTGATTGCAATTTCAATGG
CTATATGCGCTGGTACCATTATGTGGCTGATGGATCGTTGGATAAACGAG
GAGCACTTTCCAAAGACTTTTCCAAGAGGGCCATTTGAAGGATTTTGGTG
GGCGTATGTTTCCATGACTACTGTCGGATACGGTGATCGGACACCATCGA
CAATTTTCGGACGTTTATTCGCTGTGGTATGGATCATGATTGGGATTACC
ATTTTCAACATGTTTACAGCGACCATCACTACTGTACTGAATAGTGAACT
CACCTATCAAGCCTCGTTCTCGCCTTATAATATGGAGATTGGCGTAGTGA
ACAAATTGCAAGTCGTTGTGTCAAGTGTTGTCTCAGAGAGTGCTACACCT
AAAGGTTATGAAGATGTGTACAAACTTATAGAAGCTTTGAGAAAAGATGA
AGTTAAAatgaaaTTACAAAACATTCTTGCGGTGTTGCTTATTCTCGAAT
TCGTTGCTTGTGTAGCAGGTGGACAAAACGTGACAGCgacaaaaacaaag
aagaagaaaaataaaaaggttaaagCAACTGAAAAACCTGATAACAGCAT
CAAAACCAATAATACAACAAGATCCGCCAAAACTTCAGTAATAAAAGATC
TTTATGAAAAACGAAGTGAATCATTTTGTCATATAACTGAAGATCTAATT
AATGCAACGCGAGCATCTACAACATGTGAACAGATTGTACAAATAGGGAA
CCACACTCGTTATTGTAAACAAATTACAGTGGGTTATGCACCAATAGTAC
CATTGATCTATCAGAATGAAACTGGTCACGTTGTCGGAGTACTTCCagAC
TTGCTGAACGAAGTATTCATCCGAAGATGTTGTTTAGGTTGTGGCAAGAT
AGTCTACGAAAACCGATTCACTCAAGAGAACAACCTTATGCAACAAGATG
TCAATAGAAAGATGATTTTAGTTCCTCATGAGATGCAACAAGACAAAGTG
GTGAAGTTACACAAACACAATGTTGTGCGAatgataaaatatcaaaatat
attcTTTCTTGGCAAGAAAATACAAGCTGATGCAGGGGACCTTGTTGGTA
CACTTTTTGTTAGTACAATCAAAACTTGGCCTTTGTTTGTGATTGCAATT
TCAATGGCTATATGCGCTGGTACCATTATGTGGCTGATGGATCGTTGGAT
AAACGAGGAGCACTTTCCAAAGACTTTTCCAAGAGGGCCATTTGAAGGAT
TTTGGTGGGCGTATGTTTCCATGACTACTGTCGGATACGGTGATCGGACA
CCATCGACAATTTTCGGACGTTTATTCGCTGTGGTATGGATCATGATTGG
GATTACCATTTTCAACATGTTTACAGCGACCATCACTACTGTACTGAATA
GTGAACTCACCTATCAAGCCTCGTTCTCGCCTTATAATATGGAGATTGGC
GTAGTGAACAAATTGCAAGTCGTTGTGTCAAGTGTTGTCTCAGAGAGTGC
TACACCTAAAGGTTATGAAGATGTGTACAAACTTATAGAAGCTTTGAGAA
AAGATGAAGTTAAAatgaaaTTACAAAACATTCTTGCGGTGTTGCTTATT
CTCGAATTCGTTGCTTGTGTAGCAGGTGGACAAAACGTGACAGCgacaaa
aacaaagaagaagaaaaataaaaaggttaaagCAACTGAAAAACCTGATA
ACAGCATCAAAACCAATAATACAACAAGATCCGCCAAAACTTCAGTAATA
AAAGATCTTTATGAAAAACGAAGTGAATCATTTTGTCATATAACTGAAGA
TCTAATTAATGCAACGCGAGCATCTACAACATGTGAACAGATTGTACAAA
TAGGGAACCACACTCGTTATTGTAAACAAATTACAGTGGGTTATGCACCA
ATAGTACCATTGATCTATCAGAATGAAACTGGTCACGTTGTCGGAGTACT
TCCagACTTGCTGAACGAAGTATTCATCCGAAGATGTTGTTTAGGTTGTG
GCAAGATAGTCTACGAAAACCGATTCACTCAAGAGAACAACCTTATGCAA
CAAGATGTCAATAGAAAGATGATTTTAGTTCCTCATGAGATGCAACAAGA
CAAAGTGGTGAAGTTACACAAACACAATGTTGTGCGAatgataaaatatc
aaaatatattcTTTCTTGGCAAGAAAATACAAGCTGATGCAGGGGACCTT
GTTGGTACACTTTTTGTTAGTACAATCAAAACTTGGCCTTTGTTTGTGAT
TGCAATTTCAATGGCTATATGCGCTGGTACCATTATGTGGCTGATGGATC
GTTGGATAAACGAGGAGCACTTTCCAAAGACTTTTCCAAGAGGGCCATTT
GAAGGATTTTGGTGGGCGTATGTTTCCATGACTACTGTCGGATACGGTGA
TCGGACACCATCGACAATTTTCGGACGTTTATTCGCTGTGGTATGGATCA
TGATTGGGATTACCATTTTCAACATGTTTACAGCGACCATCACTACTGTA
CTGAATAGTGAACTCACCTATCAAGCCTCGTTCTCGCCTTATAATATGGA
GATTGGCGTAGTGAACAAATTGCAAGTCGTTGTGTCAAGTGTTGTCTCAG
AGAGTGCTACACCTAAAGGTTATGAAGATGTGTACAAACTTATAGAAGCT
TTGAGAAAAGATGAAGTTAAAatgaaaTTACAAAACATTCTTGCGGTGTT
GCTTATTCTCGAATTCGTTGCTTGTGTAGCAGGTGGACAAAACGTGACAG
CgacaaaaacaaagaagaagaaaaataaaaaggttaaagCAACTGAAAAA
CCTGATAACAGCATCAAAACCAATAATACAACAAGATCCGCCAAAACTTC
AGTAATAAAAGATCTTTATGAAAAACGAAGTGAATCATTTTGTCATATAA
CTGAAGATCTAATTAATGCAACGCGAGCATCTACAACATGTGAACAGATT
GTACAAATAGGGAACCACACTCGTTATTGTAAACAAATTACAGTGGGTTA
TGCACCAATAGTACCATTGATCTATCAGAATGAAACTGGTCACGTTGTCG
GAGTACTTCCagACTTGCTGAACGAAGTATTCATCCGAAGATGTTGTTTA
GGTTGTGGCAAGATAGTCTACGAAAACCGATTCACTCAAGAGAACAACCT
TATGCAACAAGATGTCAATAGAAAGATGATTTTAGTTCCTCATGAGATGC
AACAAGACAAAGTGGTGAAGTTACACAAACACAATGTTGTGCGAatgata
aaatatcaaaatatattcTTTCTTGGCAAGAAAATACAAGCTGATGCAGG
GGACCTTGTTGGTACACTTTTTGTTAGTACAATCAAAACTTGGCCTTTGT
TTGTGATTGCAATTTCAATGGCTATATGCGCTGGTACCATTATGTGGCTG
ATGGATCGTTGGATAAACGAGGAGCACTTTCCAAAGACTTTTCCAAGAGG
GCCATTTGAAGGATTTTGGTGGGCGTATGTTTCCATGACTACTGTCGGAT
ACGGTGATCGGACACCATCGACAATTTTCGGACGTTTATTCGCTGTGGTA
TGGATCATGATTGGGATTACCATTTTCAACATGTTTACAGCGACCATCAC
TACTGTACTGAATAGTGAACTCACCTATCAAGCCTCGTTCTCGCCTTATA
ATATGGAGATTGGCGTAGTGAACAAATTGCAAGTCGTTGTGTCAAGTGTT
GTCTCAGAGAGTGCTACACCTAAAGGTTATGAAGATGTGTACAAACTTAT
AGAAGCTTTGAGAAAAGATGAAGTTAAAatgaaaTTACAAAACATTCTTG
CGGTGTTGCTTATTCTCGAATTCGTTGCTTGTGTAGCAGGTGGACAAAAC
GTGACAGCgacaaaaacaaagaagaagaaaaataaaaaggttaaagCAAC
TGAAAAACCTGATAACAGCATCAAAACCAATAATACAACAAGATCCGCCA
AAACTTCAGTAATAAAAGATCTTTATGAAAAACGAAGTGAATCATTTTGT
CATATAACTGAAGATCTAATTAATGCAACGCGAGCATCTACAACATGTGA
ACAGATTGTACAAATAGGGAACCACACTCGTTATTGTAAACAAATTACAG
TGGGTTATGCACCAATAGTACCATTGATCTATCAGAATGAAACTGGTCAC
GTTGTCGGAGTACTTCCagACTTGCTGAACGAAGTATTCATCCGAAGATG
TTGTTTAGGTTGTGGCAAGATAGTCTACGAAAACCGATTCACTCAAGAGA
ACAACCTTATGCAACAAGATGTCAATAGAAAGATGATTTTAGTTCCTCAT
GAGATGCAACAAGACAAAGTGGTGAAGTTACACAAACACAATGTTGTGCG
AatgataaaatatcaaaatatattcTTTCTTGGCAAGAAAATACAAGCTG
ATGCAGGGGACCTTGTTGGTACACTTTTTGTTAGTACAATCAAAACTTGG
CCTTTGTTTGTGATTGCAATTTCAATGGCTATATGCGCTGGTACCATTAT
GTGGCTGATGGATCGTTGGATAAACGAGGAGCACTTTCCAAAGACTTTTC
CAAGAGGGCCATTTGAAGGATTTTGGTGGGCGTATGTTTCCATGACTACT
GTCGGATACGGTGATCGGACACCATCGACAATTTTCGGACGTTTATTCGC
TGTGGTATGGATCATGATTGGGATTACCATTTTCAACATGTTTACAGCGA
CCATCACTACTGTACTGAATAGTGAACTCACCTATCAAGCCTCGTTCTCG
CCTTATAATATGGAGATTGGCGTAGTGAACAAATTGCAAGTCGTTGTGTC
AAGTGTTGTCTCAGAGAGTGCTACACCTAAAGGTTATGAAGATGTGTACA
AACTTATAGAAGCTTTGAGAAAAGATGAAGTTAAAatgaaaTTACAAAAC
ATTCTTGCGGTGTTGCTTATTCTCGAATTCGTTGCTTGTGTAGCAGGTGG
ACAAAACGTGACAGCgacaaaaacaaagaagaagaaaaataaaaaggtta
aagCAACTGAAAAACCTGATAACAGCATCAAAACCAATAATACAACAAGA
TCCGCCAAAACTTCAGTAATAAAAGATCTTTATGAAAAACGAAGTGAATC
ATTTTGTCATATAACTGAAGATCTAATTAATGCAACGCGAGCATCTACAA
CATGTGAACAGATTGTACAAATAGGGAACCACACTCGTTATTGTAAACAA
ATTACAGTGGGTTATGCACCAATAGTACCATTGATCTATCAGAATGAAAC
TGGTCACGTTGTCGGAGTACTTCCagACTTGCTGAACGAAGTATTCATCC
GAAGATGTTGTTTAGGTTGTGGCAAGATAGTCTACGAAAACCGATTCACT
CAAGAGAACAACCTTATGCAACAAGATGTCAATAGAAAGATGATTTTAGT
TCCTCATGAGATGCAACAAGACAAAGTGGTGAAGTTACACAAACACAATG
TTGTGCGAatgataaaatatcaaaatatattcTTTCTTGGCAAGAAAATA
CAAGCTGATGCAGGGGACCTTGTTGGTACACTTTTTGTTAGTACAATCAA
AACTTGGCCTTTGTTTGTGATTGCAATTTCAATGGCTATATGCGCTGGTA
CCATTATGTGGCTGATGGATCGTTGGATAAACGAGGAGCACTTTCCAAAG
ACTTTTCCAAGAGGGCCATTTGAAGGATTTTGGTGGGCGTATGTTTCCAT
GACTACTGTCGGATACGGTGATCGGACACCATCGACAATTTTCGGACGTT
TATTCGCTGTGGTATGGATCATGATTGGGATTACCATTTTCAACATGTTT
ACAGCGACCATCACTACTGTACTGAATAGTGAACTCACCTATCAAGCCTC
GTTCTCGCCTTATAATATGGAGATTGGCGTAGTGAACAAATTGCAAGTCG
TTGTGTCAAGTGTTGTCTCAGAGAGTGCTACACCTAAAGGTTATGAAGAT
GTGTACAAACTTATAGAAGCTTTGAGAAAAGATGAAGTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023781XLOC_023781Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039419-proteinTCONS_00039419-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039419-exon-sc0002100-1491911889:24248..24739TCONS_00039419-exon-sc0002100-1491911889:24248..24739Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1510915933:24248..24739TCONS_00039419-exon-sc0002100-1510915933:24248..24739Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1575043694:24248..24739TCONS_00039419-exon-sc0002100-1575043694:24248..24739Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1491911889:26819..27159TCONS_00039419-exon-sc0002100-1491911889:26819..27159Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1510915933:26819..27159TCONS_00039419-exon-sc0002100-1510915933:26819..27159Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1575043694:26819..27159TCONS_00039419-exon-sc0002100-1575043694:26819..27159Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1491911889:27299..27393TCONS_00039419-exon-sc0002100-1491911889:27299..27393Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1510915933:27299..27393TCONS_00039419-exon-sc0002100-1510915933:27299..27393Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1575043694:27299..27393TCONS_00039419-exon-sc0002100-1575043694:27299..27393Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1491911889:27714..27873TCONS_00039419-exon-sc0002100-1491911889:27714..27873Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1510915933:27714..27873TCONS_00039419-exon-sc0002100-1510915933:27714..27873Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1575043694:27714..27873TCONS_00039419-exon-sc0002100-1575043694:27714..27873Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1491911889:28121..28187TCONS_00039419-exon-sc0002100-1491911889:28121..28187Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1510915933:28121..28187TCONS_00039419-exon-sc0002100-1510915933:28121..28187Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1575043694:28121..28187TCONS_00039419-exon-sc0002100-1575043694:28121..28187Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1491911889:28605..28658TCONS_00039419-exon-sc0002100-1491911889:28605..28658Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1510915933:28605..28658TCONS_00039419-exon-sc0002100-1510915933:28605..28658Clytia hemisphaericaexon
TCONS_00039419-exon-sc0002100-1575043694:28605..28658TCONS_00039419-exon-sc0002100-1575043694:28605..28658Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002100supercontigsc0002100:24248..28658 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.317474 0.154794 0.547957 0.175838 0.321099 0.0845789 0.273673 0.0955294 0.239171 0.370315 0.28755 0.211436 1.58087 0.877093 0.676021 0.628744 2.63667 2.28868 7.31644 13.4197 6.29252 5.50223 2.45707 3.97125 3.57901 5.33725 0.583764 0.464585 0.352372 0.359011
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013099K_chnl_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039419 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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